RNA–Protein interactions for RNA: ENST00000463925.1

COL5A1-204, Transcript of collagen type V alpha 1 chain, humanhuman

TSL 3

Gene COL5A1, Length 533 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A1-204ENST00000463925 CEP350Q5VT06 3117 aa23.12■■□□□ 1.29
COL5A1-204ENST00000463925 NFKBIEO00221 500 aa23.11■■□□□ 1.29
COL5A1-204ENST00000463925 EIF4A1P60842 406 aaKnown RBP23.11■■□□□ 1.29
COL5A1-204ENST00000463925 THUMPD2Q9BTF0 503 aaKnown RBP23.11■■□□□ 1.29
COL5A1-204ENST00000463925 TNRC6CQ9HCJ0 1690 aaKnown RBP23.11■■□□□ 1.29
COL5A1-204ENST00000463925 PRELPP51888 382 aa23.1■■□□□ 1.29
COL5A1-204ENST00000463925 STYK1Q6J9G0 422 aa23.1■■□□□ 1.29
COL5A1-204ENST00000463925 NBPF5PQ86XG9 351 aaPredicted RBP23.1■■□□□ 1.29
COL5A1-204ENST00000463925 MYBBP1AQ9BQG0 1328 aaKnown RBP23.09■■□□□ 1.29
COL5A1-204ENST00000463925 ARFGEF2Q9Y6D5 1785 aa23.09■■□□□ 1.29
COL5A1-204ENST00000463925 SRGNP10124 158 aa23.09■■□□□ 1.29
COL5A1-204ENST00000463925 DDX10Q13206 875 aaKnown RBP23.08■■□□□ 1.29
COL5A1-204ENST00000463925 CNKSR1Q969H4 720 aa23.08■■□□□ 1.29
COL5A1-204ENST00000463925 NIP7Q9Y221 180 aaKnown RBP eCLIP23.08■■□□□ 1.29
COL5A1-204ENST00000463925 FER1L6Q2WGJ9 1857 aa23.08■■□□□ 1.29
COL5A1-204ENST00000463925 TIAM2Q8IVF5 1701 aa23.08■■□□□ 1.28
COL5A1-204ENST00000463925 RBM46Q8TBY0 533 aaKnown RBP23.07■■□□□ 1.28
COL5A1-204ENST00000463925 MASTLQ96GX5 879 aa23.07■■□□□ 1.28
COL5A1-204ENST00000463925 C21orf2O43822 256 aa23.06■■□□□ 1.28
COL5A1-204ENST00000463925 LTBP3Q9NS15 1303 aa23.06■■□□□ 1.28
COL5A1-204ENST00000463925 CCDC88AQ3V6T2 1871 aa23.05■■□□□ 1.28
COL5A1-204ENST00000463925 KLRG2A4D1S0 409 aaPredicted RBP23.05■■□□□ 1.28
COL5A1-204ENST00000463925 HLFQ16534 295 aa23.05■■□□□ 1.28
COL5A1-204ENST00000463925 PRPF40BQ6NWY9 871 aaKnown RBP23.05■■□□□ 1.28
COL5A1-204ENST00000463925 TPTE2Q6XPS3 522 aa23.05■■□□□ 1.28
COL5A1-204ENST00000463925 C16orf71Q8IYS4 520 aaPredicted RBP23.05■■□□□ 1.28
COL5A1-204ENST00000463925 SLX4Q8IY92 1834 aa23.05■■□□□ 1.28
COL5A1-204ENST00000463925 ERBB4Q15303 1308 aa23.05■■□□□ 1.28
COL5A1-204ENST00000463925 ERVV-1B6SEH8 477 aa23.04■■□□□ 1.28
COL5A1-204ENST00000463925 RIPK4P57078 832 aa23.04■■□□□ 1.28
COL5A1-204ENST00000463925 LMOD3Q0VAK6 560 aa23.04■■□□□ 1.28
COL5A1-204ENST00000463925 TSPYL4Q9UJ04 414 aa23.04■■□□□ 1.28
COL5A1-204ENST00000463925 CACNA1SQ13698 1873 aa23.03■■□□□ 1.28
COL5A1-204ENST00000463925 GLTPD2A6NH11 291 aa23.03■■□□□ 1.28
COL5A1-204ENST00000463925 TMPOP42166 694 aaKnown RBP23.03■■□□□ 1.28
COL5A1-204ENST00000463925 APLP1P51693 650 aa23.03■■□□□ 1.28
COL5A1-204ENST00000463925 SOGA3Q5TF21 947 aa23.03■■□□□ 1.28
COL5A1-204ENST00000463925 RRAGCQ9HB90 399 aa23.03■■□□□ 1.28
COL5A1-204ENST00000463925 BABAM1Q9NWV8 329 aa23.03■■□□□ 1.28
COL5A1-204ENST00000463925 MAP3K15Q6ZN16 1313 aa23.03■■□□□ 1.28
COL5A1-204ENST00000463925 DICER1Q9UPY3 1922 aaKnown RBP23.02■■□□□ 1.28
COL5A1-204ENST00000463925 NPR1P16066 1061 aa23.02■■□□□ 1.28
COL5A1-204ENST00000463925 ZNF219Q9P2Y4 722 aaPredicted RBP23.02■■□□□ 1.28
COL5A1-204ENST00000463925 NUP98P52948 1817 aa23.01■■□□□ 1.27
COL5A1-204ENST00000463925 FSTL1Q12841 308 aa23.01■■□□□ 1.27
COL5A1-204ENST00000463925 KIF6Q6ZMV9 814 aa23.01■■□□□ 1.27
COL5A1-204ENST00000463925 TAOK3Q9H2K8 898 aa23.01■■□□□ 1.27
COL5A1-204ENST00000463925 RRP7AQ9Y3A4 280 aaKnown RBP23.01■■□□□ 1.27
COL5A1-204ENST00000463925 TTLL7Q6ZT98 887 aa23■■□□□ 1.27
COL5A1-204ENST00000463925 NGEFQ8N5V2 710 aa23■■□□□ 1.27
COL5A1-204ENST00000463925 IBTKQ9P2D0 1353 aaPredicted RBP23■■□□□ 1.27
COL5A1-204ENST00000463925 MYL6BP14649 208 aa22.99■■□□□ 1.27
COL5A1-204ENST00000463925 C7orf43Q8WVR3 580 aa22.99■■□□□ 1.27
COL5A1-204ENST00000463925 NYXQ9GZU5 481 aa22.99■■□□□ 1.27
COL5A1-204ENST00000463925 FAM177BA6PVY3 158 aa22.98■■□□□ 1.27
COL5A1-204ENST00000463925 ERFEQ4G0M1 354 aa22.98■■□□□ 1.27
COL5A1-204ENST00000463925 RIC1Q4ADV7 1423 aa22.98■■□□□ 1.27
COL5A1-204ENST00000463925 WDR90Q96KV7 1748 aa22.97■■□□□ 1.27
COL5A1-204ENST00000463925 VEGFAP15692 232 aaPredicted RBP22.97■■□□□ 1.27
COL5A1-204ENST00000463925 GTF2E1P29083 439 aaPredicted RBP22.97■■□□□ 1.27
COL5A1-204ENST00000463925 CCDC93Q567U6 631 aa22.97■■□□□ 1.27
COL5A1-204ENST00000463925 ABCC12Q96J65 1359 aa22.97■■□□□ 1.27
COL5A1-204ENST00000463925 WDR43Q15061 677 aaKnown RBP eCLIP22.96■■□□□ 1.27
COL5A1-204ENST00000463925 DPY19L2Q6NUT2 758 aa22.96■■□□□ 1.27
COL5A1-204ENST00000463925 LRP10Q7Z4F1 713 aa22.96■■□□□ 1.27
COL5A1-204ENST00000463925 ZBTB3Q9H5J0 574 aa22.96■■□□□ 1.27
COL5A1-204ENST00000463925 CRY2Q49AN0 593 aa22.95■■□□□ 1.26
COL5A1-204ENST00000463925 GIGYF2Q6Y7W6 1299 aaKnown RBP22.95■■□□□ 1.26
COL5A1-204ENST00000463925 UBN2Q6ZU65 1347 aa22.95■■□□□ 1.26
COL5A1-204ENST00000463925 CCDC146Q8IYE0 955 aa22.95■■□□□ 1.26
COL5A1-204ENST00000463925 SMC1BQ8NDV3 1235 aa22.95■■□□□ 1.26
COL5A1-204ENST00000463925 RUNDC1Q96C34 613 aa22.95■■□□□ 1.26
COL5A1-204ENST00000463925 PDIA6Q15084 440 aa22.94■■□□□ 1.26
COL5A1-204ENST00000463925 ALDH1B1P30837 517 aa22.93■■□□□ 1.26
COL5A1-204ENST00000463925 NUTM1Q86Y26 1132 aa22.93■■□□□ 1.26
COL5A1-204ENST00000463925 ZNF34Q8IZ26 560 aa22.93■■□□□ 1.26
COL5A1-204ENST00000463925 PRKRIP1Q9H875 184 aaPredicted RBP22.93■■□□□ 1.26
COL5A1-204ENST00000463925 EIF2S2P20042 333 aaKnown RBP22.92■■□□□ 1.26
COL5A1-204ENST00000463925 GPTP24298 496 aa22.92■■□□□ 1.26
COL5A1-204ENST00000463925 POTECB2RU33 542 aa22.91■■□□□ 1.26
COL5A1-204ENST00000463925 CHL1O00533 1208 aa22.91■■□□□ 1.26
COL5A1-204ENST00000463925 FKBP4Q02790 459 aaKnown RBP eCLIP22.91■■□□□ 1.26
COL5A1-204ENST00000463925 NEUROD2Q15784 382 aa22.91■■□□□ 1.26
COL5A1-204ENST00000463925 SUSD4Q5VX71 490 aa22.91■■□□□ 1.26
COL5A1-204ENST00000463925 DNAJC5GQ8N7S2 189 aa22.91■■□□□ 1.26
COL5A1-204ENST00000463925 ADAMTS8Q9UP79 889 aa22.91■■□□□ 1.26
COL5A1-204ENST00000463925 TRIM35Q9UPQ4 493 aa22.91■■□□□ 1.26
COL5A1-204ENST00000463925 NTSR2O95665 410 aa22.9■■□□□ 1.26
COL5A1-204ENST00000463925 PROSER3Q2NL68 480 aa22.9■■□□□ 1.26
COL5A1-204ENST00000463925 PARP10Q53GL7 1025 aa22.9■■□□□ 1.26
COL5A1-204ENST00000463925 RTKN2Q8IZC4 609 aa22.9■■□□□ 1.26
COL5A1-204ENST00000463925 SNED1Q8TER0 1413 aa22.9■■□□□ 1.26
COL5A1-204ENST00000463925 PPP1R42Q7Z4L9 355 aa22.88■■□□□ 1.25
COL5A1-204ENST00000463925 ANXA1P04083 346 aa22.87■■□□□ 1.25
COL5A1-204ENST00000463925 HOXA10P31260 410 aaPredicted RBP22.87■■□□□ 1.25
COL5A1-204ENST00000463925 OLFM4Q6UX06 510 aa22.87■■□□□ 1.25
COL5A1-204ENST00000463925 RPGRQ92834 1020 aaKnown RBP22.86■■□□□ 1.25
COL5A1-204ENST00000463925 DDX21Q9NR30 783 aaKnown RBP eCLIP22.86■■□□□ 1.25
COL5A1-204ENST00000463925 ANKRD36CQ5JPF3 1778 aa22.86■■□□□ 1.25
COL5A1-204ENST00000463925 RNF123Q5XPI4 1314 aa22.85■■□□□ 1.25
Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms