RNA–Protein interactions for RNA: ENST00000463470.1

VPS72-203, Transcript of vacuolar protein sorting 72 homolog, humanhuman

TSL 1 (best)

Gene VPS72, Length 277 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS72-203ENST00000463470 STAP2Q9UGK3 403 aa5.74□□□□□ -1.49
VPS72-203ENST00000463470 SSUH2Q9Y2M2 353 aa5.74□□□□□ -1.49
VPS72-203ENST00000463470 ABCC6O95255 1503 aa5.74□□□□□ -1.49
VPS72-203ENST00000463470 COL18A1P39060 1754 aa5.73□□□□□ -1.49
VPS72-203ENST00000463470 FSD2A1L4K1 749 aa5.73□□□□□ -1.49
VPS72-203ENST00000463470 PSDA5PKW4 1024 aaPredicted RBP5.73□□□□□ -1.49
VPS72-203ENST00000463470 STK25O00506 426 aa5.73□□□□□ -1.49
VPS72-203ENST00000463470 PLSCR1O15162 318 aa5.73□□□□□ -1.49
VPS72-203ENST00000463470 TRIM37O94972 964 aa5.73□□□□□ -1.49
VPS72-203ENST00000463470 UBTFL1P0CB47 393 aaPredicted RBP5.73□□□□□ -1.49
VPS72-203ENST00000463470 ERC1Q8IUD2 1116 aa5.73□□□□□ -1.49
VPS72-203ENST00000463470 RNF25Q96BH1 459 aaPredicted RBP5.73□□□□□ -1.49
VPS72-203ENST00000463470 IL17RAQ96F46 866 aa5.73□□□□□ -1.49
VPS72-203ENST00000463470 INTS4Q96HW7 963 aaKnown RBP5.73□□□□□ -1.49
VPS72-203ENST00000463470 GPATCH3Q96I76 525 aa5.73□□□□□ -1.49
VPS72-203ENST00000463470 C1orf115Q9H7X2 142 aa5.73□□□□□ -1.49
VPS72-203ENST00000463470 WDR17Q8IZU2 1322 aa5.73□□□□□ -1.49
VPS72-203ENST00000463470 PIK3C2AO00443 1686 aa5.72□□□□□ -1.49
VPS72-203ENST00000463470 CEMIPQ8WUJ3 1361 aa5.72□□□□□ -1.49
VPS72-203ENST00000463470 PARP4Q9UKK3 1724 aaKnown RBP5.72□□□□□ -1.49
VPS72-203ENST00000463470 HIP1O00291 1037 aa5.72□□□□□ -1.49
VPS72-203ENST00000463470 RIOK3O14730 519 aaKnown RBP5.72□□□□□ -1.49
VPS72-203ENST00000463470 ALDH1L1O75891 902 aa5.72□□□□□ -1.49
VPS72-203ENST00000463470 DDX58O95786 925 aaKnown RBP5.72□□□□□ -1.49
VPS72-203ENST00000463470 GSPT1P15170 499 aaKnown RBP5.72□□□□□ -1.49
VPS72-203ENST00000463470 SDSP20132 328 aa5.72□□□□□ -1.49
VPS72-203ENST00000463470 MX1P20591 662 aa5.72□□□□□ -1.49
VPS72-203ENST00000463470 PDE1AP54750 535 aa5.72□□□□□ -1.49
VPS72-203ENST00000463470 TEFQ10587 303 aa5.72□□□□□ -1.49
VPS72-203ENST00000463470 R3HDM1Q15032 1099 aaKnown RBP5.72□□□□□ -1.49
VPS72-203ENST00000463470 KLHL40Q2TBA0 621 aa5.72□□□□□ -1.49
VPS72-203ENST00000463470 AKAP4Q5JQC9 854 aa5.72□□□□□ -1.49
VPS72-203ENST00000463470 HDGFL1Q5TGJ6 251 aa5.72□□□□□ -1.49
VPS72-203ENST00000463470 SLC4A10Q6U841 1118 aa5.72□□□□□ -1.49
VPS72-203ENST00000463470 PTF1AQ7RTS3 328 aa5.72□□□□□ -1.49
VPS72-203ENST00000463470 TICAM2Q86XR7 235 aa5.72□□□□□ -1.49
VPS72-203ENST00000463470 MARCH10Q8NA82 808 aaPredicted RBP5.72□□□□□ -1.49
VPS72-203ENST00000463470 SSH3Q8TE77 659 aa5.72□□□□□ -1.49
VPS72-203ENST00000463470 RUFY2Q8WXA3 655 aa5.72□□□□□ -1.49
VPS72-203ENST00000463470 TNPO1Q92973 898 aaKnown RBP5.72□□□□□ -1.49
VPS72-203ENST00000463470 KIF1BPQ96EK5 621 aa5.72□□□□□ -1.49
VPS72-203ENST00000463470 KIF2CQ99661 725 aa5.72□□□□□ -1.49
VPS72-203ENST00000463470 MEIS3Q99687 375 aa5.72□□□□□ -1.49
VPS72-203ENST00000463470 STRN4Q9NRL3 753 aa5.72□□□□□ -1.49
VPS72-203ENST00000463470 DBF4Q9UBU7 674 aaPredicted RBP5.72□□□□□ -1.49
VPS72-203ENST00000463470 RREB1Q92766 1687 aa5.72□□□□□ -1.49
VPS72-203ENST00000463470 LRRC37A3O60309 1634 aa5.71□□□□□ -1.5
VPS72-203ENST00000463470 MBD3O95983 291 aa5.71□□□□□ -1.5
VPS72-203ENST00000463470 APBA3O96018 575 aa5.71□□□□□ -1.5
VPS72-203ENST00000463470 C1orf141Q5JVX7 400 aa5.71□□□□□ -1.5
VPS72-203ENST00000463470 SYAP1Q96A49 352 aaPredicted RBP5.71□□□□□ -1.5
VPS72-203ENST00000463470 CDCA7Q9BWT1 371 aaPredicted RBP5.71□□□□□ -1.5
VPS72-203ENST00000463470 CARD10Q9BWT7 1032 aa5.71□□□□□ -1.5
VPS72-203ENST00000463470 BCL11BQ9C0K0 894 aaPredicted RBP5.71□□□□□ -1.5
VPS72-203ENST00000463470 UTRNP46939 3433 aa5.71□□□□□ -1.5
VPS72-203ENST00000463470 TTC41PQ6P2S7 1318 aa5.71□□□□□ -1.5
VPS72-203ENST00000463470 A0A0G2JS52 829 aa5.7□□□□□ -1.5
VPS72-203ENST00000463470 NCLP19338 710 aaKnown RBP5.7□□□□□ -1.5
VPS72-203ENST00000463470 EVA1CP58658 441 aa5.7□□□□□ -1.5
VPS72-203ENST00000463470 MTX1Q13505 466 aa5.7□□□□□ -1.5
VPS72-203ENST00000463470 CSPP1Q1MSJ5 1256 aa5.7□□□□□ -1.5
VPS72-203ENST00000463470 KIAA1211Q6ZU35 1233 aa5.7□□□□□ -1.5
VPS72-203ENST00000463470 CNTROBQ8N137 903 aa5.7□□□□□ -1.5
VPS72-203ENST00000463470 IL17REQ8NFR9 667 aa5.7□□□□□ -1.5
VPS72-203ENST00000463470 DNAAF4Q8WXU2 420 aa5.7□□□□□ -1.5
VPS72-203ENST00000463470 TRIM44Q96DX7 344 aaPredicted RBP5.7□□□□□ -1.5
VPS72-203ENST00000463470 ESYT1Q9BSJ8 1104 aa5.7□□□□□ -1.5
VPS72-203ENST00000463470 RNF39Q9H2S5 420 aa5.7□□□□□ -1.5
VPS72-203ENST00000463470 GRPEL1Q9HAV7 217 aa5.7□□□□□ -1.5
VPS72-203ENST00000463470 HYPKQ9NX55 129 aa5.7□□□□□ -1.5
VPS72-203ENST00000463470 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP5.7□□□□□ -1.55e-8■■■■□ 20
VPS72-203ENST00000463470 ATP6V1DQ9Y5K8 247 aa5.7□□□□□ -1.5
VPS72-203ENST00000463470 N4BP2Q86UW6 1770 aaPredicted RBP5.7□□□□□ -1.5
VPS72-203ENST00000463470 SOX12O15370 315 aa5.69□□□□□ -1.5
VPS72-203ENST00000463470 GLRX3O76003 335 aaKnown RBP5.69□□□□□ -1.5
VPS72-203ENST00000463470 PHF14O94880 888 aa5.69□□□□□ -1.5
VPS72-203ENST00000463470 BAG4O95429 457 aaKnown RBP5.69□□□□□ -1.5
VPS72-203ENST00000463470 EIF4A1P60842 406 aaKnown RBP5.69□□□□□ -1.5
VPS72-203ENST00000463470 CCDC173Q0VFZ6 552 aa5.69□□□□□ -1.5
VPS72-203ENST00000463470 DDB1Q16531 1140 aa5.69□□□□□ -1.5
VPS72-203ENST00000463470 HS1BP3Q53T59 392 aa5.69□□□□□ -1.5
VPS72-203ENST00000463470 CLASRPQ8N2M8 674 aaKnown RBP5.69□□□□□ -1.5
VPS72-203ENST00000463470 CHMP4CQ96CF2 233 aa5.69□□□□□ -1.5
VPS72-203ENST00000463470 USP44Q9H0E7 712 aa5.69□□□□□ -1.5
VPS72-203ENST00000463470 ANO8Q9HCE9 1232 aaPredicted RBP5.69□□□□□ -1.5
VPS72-203ENST00000463470 WDR70Q9NW82 654 aa5.69□□□□□ -1.5
VPS72-203ENST00000463470 DDX49Q9Y6V7 483 aaKnown RBP5.69□□□□□ -1.5
VPS72-203ENST00000463470 ERBB3P21860 1342 aa5.69□□□□□ -1.5
VPS72-203ENST00000463470 SALL3Q9BXA9 1300 aa5.69□□□□□ -1.5
VPS72-203ENST00000463470 USP42Q9H9J4 1324 aaKnown RBP5.69□□□□□ -1.5
VPS72-203ENST00000463470 NUP188Q5SRE5 1749 aa5.68□□□□□ -1.5
VPS72-203ENST00000463470 RGPD3A6NKT7 1758 aaPredicted RBP5.68□□□□□ -1.5
VPS72-203ENST00000463470 RGPD4Q7Z3J3 1758 aa5.68□□□□□ -1.5
VPS72-203ENST00000463470 BTBD11A6QL63 1104 aa5.68□□□□□ -1.5
VPS72-203ENST00000463470 TRIM6-TRIM34B2RNG4 842 aa5.68□□□□□ -1.5
VPS72-203ENST00000463470 SURF6O75683 361 aaKnown RBP5.68□□□□□ -1.5
VPS72-203ENST00000463470 LETM1O95202 739 aaPredicted RBP5.68□□□□□ -1.5
VPS72-203ENST00000463470 CYP2E1P05181 493 aaPredicted RBP5.68□□□□□ -1.5
VPS72-203ENST00000463470 XRCC6P12956 609 aaKnown RBP eCLIP5.68□□□□□ -1.5
VPS72-203ENST00000463470 CHMLP26374 656 aa5.68□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms