RNA–Protein interactions for RNA: ENST00000463147.1

USH2A-203, Transcript of usherin, humanhuman

TSL 2

Gene USH2A, Length 618 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USH2A-203ENST00000463147 ZNF587Q96SQ5 575 aaPredicted RBP8.71□□□□□ -1.02
USH2A-203ENST00000463147 TPSG1Q9NRR2 321 aa8.71□□□□□ -1.02
USH2A-203ENST00000463147 C9orf172C9J069 976 aa8.7□□□□□ -1.02
USH2A-203ENST00000463147 EML1O00423 815 aa8.7□□□□□ -1.02
USH2A-203ENST00000463147 DYRK3O43781 588 aa8.7□□□□□ -1.02
USH2A-203ENST00000463147 NOS2P35228 1153 aa8.7□□□□□ -1.02
USH2A-203ENST00000463147 ABL2P42684 1182 aa8.7□□□□□ -1.02
USH2A-203ENST00000463147 LRRC69Q6ZNQ3 347 aa8.69□□□□□ -1.02
USH2A-203ENST00000463147 NFATC2IPQ8NCF5 419 aa8.69□□□□□ -1.02
USH2A-203ENST00000463147 GDPD2Q9HCC8 539 aa8.69□□□□□ -1.02
USH2A-203ENST00000463147 ZFP64Q9NPA5 681 aa8.69□□□□□ -1.02
USH2A-203ENST00000463147 ANKIB1Q9P2G1 1089 aa8.69□□□□□ -1.02
USH2A-203ENST00000463147 CHMP3Q9Y3E7 222 aa8.69□□□□□ -1.02
USH2A-203ENST00000463147 USP3Q9Y6I4 520 aa8.69□□□□□ -1.02
USH2A-203ENST00000463147 TXLNAP40222 546 aa8.68□□□□□ -1.02
USH2A-203ENST00000463147 PSME1Q06323 249 aa8.68□□□□□ -1.02
USH2A-203ENST00000463147 ARTNQ5T4W7 220 aa8.68□□□□□ -1.02
USH2A-203ENST00000463147 MICALL1Q8N3F8 863 aa8.68□□□□□ -1.02
USH2A-203ENST00000463147 PARP3Q9Y6F1 533 aa8.68□□□□□ -1.02
USH2A-203ENST00000463147 KRTAP9-6A0A140TA67 174 aa8.67□□□□□ -1.02
USH2A-203ENST00000463147 GTF2IP78347 998 aa8.67□□□□□ -1.02
USH2A-203ENST00000463147 NBPF11Q86T75 865 aa8.67□□□□□ -1.02
USH2A-203ENST00000463147 ZNF232Q9UNY5 417 aa8.67□□□□□ -1.02
USH2A-203ENST00000463147 SERTM1A2A2V5 107 aa8.66□□□□□ -1.02
USH2A-203ENST00000463147 H2AFB1P0C5Y9 115 aa8.66□□□□□ -1.02
USH2A-203ENST00000463147 H2AFB2P0C5Z0 115 aa8.66□□□□□ -1.02
USH2A-203ENST00000463147 ADH7P40394 386 aa8.66□□□□□ -1.02
USH2A-203ENST00000463147 NRG1Q02297 640 aaPredicted RBP8.66□□□□□ -1.02
USH2A-203ENST00000463147 C1orf53Q5VUE5 145 aa8.66□□□□□ -1.02
USH2A-203ENST00000463147 WWC1Q8IX03 1113 aa8.66□□□□□ -1.02
USH2A-203ENST00000463147 EFCC1Q9HA90 598 aa8.66□□□□□ -1.02
USH2A-203ENST00000463147 ZNF358Q9NW07 568 aa8.66□□□□□ -1.02
USH2A-203ENST00000463147 SKIP12755 728 aa8.65□□□□□ -1.02
USH2A-203ENST00000463147 SPEM2Q0P670 501 aa8.65□□□□□ -1.02
USH2A-203ENST00000463147 TRIM50Q86XT4 487 aa8.65□□□□□ -1.02
USH2A-203ENST00000463147 SLC9A9Q8IVB4 645 aa8.65□□□□□ -1.02
USH2A-203ENST00000463147 RHPN1Q8TCX5 695 aa8.65□□□□□ -1.02
USH2A-203ENST00000463147 ZDHHC1Q8WTX9 485 aa8.65□□□□□ -1.02
USH2A-203ENST00000463147 LILRB5O75023 590 aa8.64□□□□□ -1.03
USH2A-203ENST00000463147 ALBP02768 609 aa8.64□□□□□ -1.03
USH2A-203ENST00000463147 NID1P14543 1247 aa8.64□□□□□ -1.03
USH2A-203ENST00000463147 KCNQ4P56696 695 aa8.64□□□□□ -1.03
USH2A-203ENST00000463147 COL9A3Q14050 684 aaPredicted RBP8.64□□□□□ -1.03
USH2A-203ENST00000463147 PRSS36Q5K4E3 855 aa8.64□□□□□ -1.03
USH2A-203ENST00000463147 SERBP1Q8NC51 408 aaKnown RBP eCLIP8.64□□□□□ -1.03
USH2A-203ENST00000463147 STARD13Q9Y3M8 1113 aa8.64□□□□□ -1.03
USH2A-203ENST00000463147 EPHA4P54764 986 aa8.63□□□□□ -1.03
USH2A-203ENST00000463147 SFSWAPQ12872 951 aaKnown RBP8.63□□□□□ -1.03
USH2A-203ENST00000463147 HIF1AQ16665 826 aa8.63□□□□□ -1.03
USH2A-203ENST00000463147 TRAPPC3LQ5T215 181 aa8.63□□□□□ -1.03
USH2A-203ENST00000463147 SLC30A3Q99726 388 aa8.63□□□□□ -1.03
USH2A-203ENST00000463147 BRD7Q9NPI1 651 aa8.63□□□□□ -1.03
USH2A-203ENST00000463147 ELNP15502 786 aa8.62□□□□□ -1.03
USH2A-203ENST00000463147 HIRAP54198 1017 aaPredicted RBP8.62□□□□□ -1.03
USH2A-203ENST00000463147 PSMA6P60900 246 aaKnown RBP8.62□□□□□ -1.03
USH2A-203ENST00000463147 RAC1P63000 192 aa8.62□□□□□ -1.03
USH2A-203ENST00000463147 C7orf43Q8WVR3 580 aa8.62□□□□□ -1.03
USH2A-203ENST00000463147 CEP63Q96MT8 703 aa8.62□□□□□ -1.03
USH2A-203ENST00000463147 KCNH4Q9UQ05 1017 aa8.62□□□□□ -1.03
USH2A-203ENST00000463147 FAM229AH3BQW9 127 aa8.61□□□□□ -1.03
USH2A-203ENST00000463147 ATP1A2P50993 1020 aa8.61□□□□□ -1.03
USH2A-203ENST00000463147 ADGRE1Q14246 886 aa8.61□□□□□ -1.03
USH2A-203ENST00000463147 GRIK4Q16099 956 aa8.61□□□□□ -1.03
USH2A-203ENST00000463147 C20orf204Q6ZNR8 217 aa8.61□□□□□ -1.03
USH2A-203ENST00000463147 NCOA4Q13772 614 aa8.6□□□□□ -1.03
USH2A-203ENST00000463147 LRP8Q14114 963 aa8.6□□□□□ -1.03
USH2A-203ENST00000463147 FOXD4L6Q3SYB3 417 aaPredicted RBP8.6□□□□□ -1.03
USH2A-203ENST00000463147 FOXD4L3Q6VB84 417 aaPredicted RBP8.6□□□□□ -1.03
USH2A-203ENST00000463147 TXNRD3Q86VQ6 643 aa8.6□□□□□ -1.03
USH2A-203ENST00000463147 LENG1Q96BZ8 264 aaPredicted RBP8.6□□□□□ -1.03
USH2A-203ENST00000463147 PIK3CDO00329 1044 aa8.59□□□□□ -1.03
USH2A-203ENST00000463147 M0R2N6 131 aa8.58□□□□□ -1.04
USH2A-203ENST00000463147 MBTPS1Q14703 1052 aa8.58□□□□□ -1.04
USH2A-203ENST00000463147 TNS4Q8IZW8 715 aa8.58□□□□□ -1.04
USH2A-203ENST00000463147 ALG2Q9H553 416 aa8.58□□□□□ -1.04
USH2A-203ENST00000463147 A0A0A0MRY4 1105 aa8.57□□□□□ -1.04
USH2A-203ENST00000463147 POTEAQ6S8J7 498 aa8.57□□□□□ -1.04
USH2A-203ENST00000463147 C8orf86Q6ZUL3 223 aa8.57□□□□□ -1.04
USH2A-203ENST00000463147 SFI1A8K8P3 1242 aa8.56□□□□□ -1.04
USH2A-203ENST00000463147 USP17L5A8MUK1 530 aa8.56□□□□□ -1.04
USH2A-203ENST00000463147 PCSK7Q16549 785 aa8.56□□□□□ -1.04
USH2A-203ENST00000463147 UBE2OQ9C0C9 1292 aaKnown RBP8.56□□□□□ -1.04
USH2A-203ENST00000463147 RBM19Q9Y4C8 960 aaKnown RBP8.56□□□□□ -1.04
USH2A-203ENST00000463147 TYRO3Q06418 890 aa8.55□□□□□ -1.04
USH2A-203ENST00000463147 MCM6Q14566 821 aa8.55□□□□□ -1.04
USH2A-203ENST00000463147 TBCELQ5QJ74 424 aa8.55□□□□□ -1.04
USH2A-203ENST00000463147 KRTAP1-3Q8IUG1 177 aa8.55□□□□□ -1.04
USH2A-203ENST00000463147 BHMTQ93088 406 aa8.55□□□□□ -1.04
USH2A-203ENST00000463147 PHACTR1Q9C0D0 580 aa8.55□□□□□ -1.04
USH2A-203ENST00000463147 TIMELESSQ9UNS1 1208 aa8.55□□□□□ -1.04
USH2A-203ENST00000463147 SELPP16109 830 aa8.54□□□□□ -1.04
USH2A-203ENST00000463147 CCDC102BQ68D86 513 aa8.54□□□□□ -1.04
USH2A-203ENST00000463147 RAB44Q7Z6P3 723 aaPredicted RBP8.54□□□□□ -1.04
USH2A-203ENST00000463147 PLEKHM2Q8IWE5 1019 aa8.54□□□□□ -1.04
USH2A-203ENST00000463147 TPCN2Q8NHX9 752 aa8.54□□□□□ -1.04
USH2A-203ENST00000463147 SUSD3Q96L08 255 aa8.54□□□□□ -1.04
USH2A-203ENST00000463147 JPH1Q9HDC5 661 aaPredicted RBP8.54□□□□□ -1.04
USH2A-203ENST00000463147 STAG2Q8N3U4 1231 aa8.53□□□□□ -1.04
USH2A-203ENST00000463147 LARGE2Q8N3Y3 721 aa8.53□□□□□ -1.04
USH2A-203ENST00000463147 DTWD1Q8N5C7 304 aa8.53□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms