RNA–Protein interactions for RNA: ENST00000462710.5

SRRM1-205, Transcript of serine and arginine repetitive matrix 1, humanhuman

TSL 5

Gene SRRM1, Length 2,624 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM1-205ENST00000462710 TBC1D9BQ66K14 1250 aa12.26□□□□□ -0.45
SRRM1-205ENST00000462710 RTKN2Q8IZC4 609 aa12.26□□□□□ -0.45
SRRM1-205ENST00000462710 VPS33BQ9H267 617 aa12.26□□□□□ -0.45
SRRM1-205ENST00000462710 FOXN1O15353 648 aa12.25□□□□□ -0.45
SRRM1-205ENST00000462710 KNSTRNQ9Y448 316 aa12.25□□□□□ -0.45
SRRM1-205ENST00000462710 MAP2K1Q02750 393 aaPredicted RBP12.24□□□□□ -0.45
SRRM1-205ENST00000462710 MTHFSDQ2M296 383 aaKnown RBP12.24□□□□□ -0.45
SRRM1-205ENST00000462710 TTC5Q8N0Z6 440 aa12.24□□□□□ -0.45
SRRM1-205ENST00000462710 FMNL2Q96PY5 1086 aa12.24□□□□□ -0.45
SRRM1-205ENST00000462710 PSMD1Q99460 953 aa12.24□□□□□ -0.45
SRRM1-205ENST00000462710 FZD9O00144 591 aa12.24□□□□□ -0.45
SRRM1-205ENST00000462710 ZNF790Q6PG37 636 aa12.24□□□□□ -0.45
SRRM1-205ENST00000462710 CNBD1Q8NA66 436 aa12.24□□□□□ -0.45
SRRM1-205ENST00000462710 SETDB2Q96T68 719 aa12.24□□□□□ -0.45
SRRM1-205ENST00000462710 HACL1Q9UJ83 578 aa12.24□□□□□ -0.45
SRRM1-205ENST00000462710 HSPA8P11142 646 aaKnown RBP12.23□□□□□ -0.45
SRRM1-205ENST00000462710 PRPF40BQ6NWY9 871 aaKnown RBP12.23□□□□□ -0.45
SRRM1-205ENST00000462710 HHIPL1Q96JK4 782 aa12.23□□□□□ -0.45
SRRM1-205ENST00000462710 ZNF652Q9Y2D9 606 aa12.23□□□□□ -0.45
SRRM1-205ENST00000462710 HTATSF1O43719 755 aaKnown RBP12.23□□□□□ -0.45
SRRM1-205ENST00000462710 C21orf2O43822 256 aa12.23□□□□□ -0.45
SRRM1-205ENST00000462710 DIAPH1O60610 1272 aaKnown RBP12.23□□□□□ -0.45
SRRM1-205ENST00000462710 GNAT3A8MTJ3 354 aa12.22□□□□□ -0.45
SRRM1-205ENST00000462710 HSPA5P11021 654 aaKnown RBP12.22□□□□□ -0.45
SRRM1-205ENST00000462710 SLC39A6Q13433 755 aa12.22□□□□□ -0.45
SRRM1-205ENST00000462710 ZNF622Q969S3 477 aaKnown RBP eCLIP12.22□□□□□ -0.451e-14■■■□□ 15.4
SRRM1-205ENST00000462710 KIF7Q2M1P5 1343 aa12.22□□□□□ -0.45
SRRM1-205ENST00000462710 ALDH1B1P30837 517 aa12.21□□□□□ -0.45
SRRM1-205ENST00000462710 TNNT2P45379 298 aaPredicted RBP12.21□□□□□ -0.45
SRRM1-205ENST00000462710 VEGFBP49765 207 aa12.21□□□□□ -0.45
SRRM1-205ENST00000462710 GPC2Q8N158 579 aa12.21□□□□□ -0.45
SRRM1-205ENST00000462710 DDNO94850 711 aaPredicted RBP12.21□□□□□ -0.46
SRRM1-205ENST00000462710 CANXP27824 592 aaKnown RBP12.21□□□□□ -0.46
SRRM1-205ENST00000462710 ZNF496Q96IT1 587 aaPredicted RBP12.21□□□□□ -0.46
SRRM1-205ENST00000462710 LTBP1Q14766 1721 aa12.2□□□□□ -0.46
SRRM1-205ENST00000462710 CA12O43570 354 aa12.2□□□□□ -0.46
SRRM1-205ENST00000462710 CAPN15O75808 1086 aa12.2□□□□□ -0.46
SRRM1-205ENST00000462710 ECE1P42892 770 aa12.2□□□□□ -0.46
SRRM1-205ENST00000462710 IL17REQ8NFR9 667 aa12.2□□□□□ -0.46
SRRM1-205ENST00000462710 CDHR2Q9BYE9 1310 aa12.19□□□□□ -0.46
SRRM1-205ENST00000462710 KDM3BQ7LBC6 1761 aa12.19□□□□□ -0.46
SRRM1-205ENST00000462710 EPHX2P34913 555 aa12.19□□□□□ -0.46
SRRM1-205ENST00000462710 TEFQ10587 303 aa12.19□□□□□ -0.46
SRRM1-205ENST00000462710 DEFB115Q30KQ5 88 aa12.19□□□□□ -0.46
SRRM1-205ENST00000462710 CRY2Q49AN0 593 aa12.19□□□□□ -0.46
SRRM1-205ENST00000462710 PER1O15534 1290 aaPredicted RBP12.19□□□□□ -0.46
SRRM1-205ENST00000462710 IARSP41252 1262 aaKnown RBP12.19□□□□□ -0.46
SRRM1-205ENST00000462710 TRIM26Q12899 539 aaPredicted RBP12.19□□□□□ -0.46
SRRM1-205ENST00000462710 MKRN1Q9UHC7 482 aaKnown RBP12.19□□□□□ -0.46
SRRM1-205ENST00000462710 WDR33Q9C0J8 1336 aaKnown RBP12.18□□□□□ -0.46
SRRM1-205ENST00000462710 HOXA10P31260 410 aaPredicted RBP12.18□□□□□ -0.46
SRRM1-205ENST00000462710 USP50Q70EL3 339 aaPredicted RBP12.18□□□□□ -0.46
SRRM1-205ENST00000462710 DZIP3Q86Y13 1208 aaKnown RBP12.18□□□□□ -0.46
SRRM1-205ENST00000462710 ERVV-1B6SEH8 477 aa12.18□□□□□ -0.46
SRRM1-205ENST00000462710 MAP2K2P36507 400 aa12.18□□□□□ -0.46
SRRM1-205ENST00000462710 TPTE2Q6XPS3 522 aa12.18□□□□□ -0.46
SRRM1-205ENST00000462710 ABHD8Q96I13 439 aa12.17□□□□□ -0.46
SRRM1-205ENST00000462710 NYXQ9GZU5 481 aa12.17□□□□□ -0.46
SRRM1-205ENST00000462710 PGAP2Q9UHJ9 254 aa12.17□□□□□ -0.46
SRRM1-205ENST00000462710 ZNF541Q9H0D2 1346 aa12.17□□□□□ -0.46
SRRM1-205ENST00000462710 ANKRD36CQ5JPF3 1778 aa12.16□□□□□ -0.46
SRRM1-205ENST00000462710 SNRPA1P09661 255 aaKnown RBP12.16□□□□□ -0.46
SRRM1-205ENST00000462710 RNF123Q5XPI4 1314 aa12.16□□□□□ -0.46
SRRM1-205ENST00000462710 NUP98P52948 1817 aa12.16□□□□□ -0.46
SRRM1-205ENST00000462710 NPM2Q86SE8 214 aaKnown RBP12.16□□□□□ -0.46
SRRM1-205ENST00000462710 CNTROBQ8N137 903 aa12.16□□□□□ -0.46
SRRM1-205ENST00000462710 CRAMP1Q96RY5 1269 aa12.16□□□□□ -0.46
SRRM1-205ENST00000462710 TLL2Q9Y6L7 1015 aa12.16□□□□□ -0.46
SRRM1-205ENST00000462710 POTEIP0CG38 1075 aa12.15□□□□□ -0.46
SRRM1-205ENST00000462710 POTEJP0CG39 1038 aa12.15□□□□□ -0.46
SRRM1-205ENST00000462710 ERBB4Q15303 1308 aa12.15□□□□□ -0.46
SRRM1-205ENST00000462710 NBPF5PQ86XG9 351 aaPredicted RBP12.15□□□□□ -0.46
SRRM1-205ENST00000462710 SYNE4Q8N205 404 aa12.15□□□□□ -0.46
SRRM1-205ENST00000462710 DDX21Q9NR30 783 aaKnown RBP eCLIP12.15□□□□□ -0.46
SRRM1-205ENST00000462710 TBC1D2BQ9UPU7 963 aa12.15□□□□□ -0.46
SRRM1-205ENST00000462710 BICDL1Q6ZP65 573 aa12.14□□□□□ -0.47
SRRM1-205ENST00000462710 LRRC37AA6NMS7 1700 aa12.14□□□□□ -0.47
SRRM1-205ENST00000462710 LBX1P52954 281 aa12.14□□□□□ -0.47
SRRM1-205ENST00000462710 DDX60Q8IY21 1712 aaKnown RBP12.14□□□□□ -0.47
SRRM1-205ENST00000462710 PNISRQ8TF01 805 aaKnown RBP12.14□□□□□ -0.47
SRRM1-205ENST00000462710 A1BGP04217 495 aa12.13□□□□□ -0.47
SRRM1-205ENST00000462710 HMOX1P09601 288 aa12.13□□□□□ -0.47
SRRM1-205ENST00000462710 EIF6P56537 245 aaKnown RBP12.13□□□□□ -0.47
SRRM1-205ENST00000462710 BTBD11A6QL63 1104 aa12.13□□□□□ -0.47
SRRM1-205ENST00000462710 ZC3H15Q8WU90 426 aaKnown RBP12.13□□□□□ -0.47
SRRM1-205ENST00000462710 RTFDC1Q9BY42 306 aaPredicted RBP12.13□□□□□ -0.47
SRRM1-205ENST00000462710 RSPH6AQ9H0K4 717 aa12.12□□□□□ -0.47
SRRM1-205ENST00000462710 LMOD1P29536 600 aaPredicted RBP12.12□□□□□ -0.47
SRRM1-205ENST00000462710 SUPT20HQ8NEM7 779 aa12.12□□□□□ -0.47
SRRM1-205ENST00000462710 ZNF609O15014 1411 aa12.12□□□□□ -0.47
SRRM1-205ENST00000462710 COL4A5P29400 1685 aa12.12□□□□□ -0.47
SRRM1-205ENST00000462710 BRPF1P55201 1214 aaPredicted RBP12.11□□□□□ -0.47
SRRM1-205ENST00000462710 JDP2Q8WYK2 163 aa12.11□□□□□ -0.47
SRRM1-205ENST00000462710 MLLT1Q03111 559 aaPredicted RBP12.1□□□□□ -0.47
SRRM1-205ENST00000462710 SLC10A5Q5PT55 438 aa12.1□□□□□ -0.47
SRRM1-205ENST00000462710 CAPNS2Q96L46 248 aa12.1□□□□□ -0.47
SRRM1-205ENST00000462710 SAGE1Q9NXZ1 904 aa12.1□□□□□ -0.47
SRRM1-205ENST00000462710 ZNF277Q9NRM2 450 aaPredicted RBP12.1□□□□□ -0.47
SRRM1-205ENST00000462710 ADARB2Q9NS39 739 aaKnown RBP12.1□□□□□ -0.47
SRRM1-205ENST00000462710 USP16Q9Y5T5 823 aa12.1□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms