RNA–Protein interactions for RNA: ENST00000462597.1

PDLIM4-204, Transcript of PDZ and LIM domain 4, humanhuman

TSL 3

Gene PDLIM4, Length 767 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM4-204ENST00000462597 SETDB2Q96T68 719 aa24.23■■□□□ 1.47
PDLIM4-204ENST00000462597 CACNA1SQ13698 1873 aa24.22■■□□□ 1.47
PDLIM4-204ENST00000462597 H0YIN7 160 aa24.21■■□□□ 1.47
PDLIM4-204ENST00000462597 RASSF7Q02833 373 aa24.21■■□□□ 1.47
PDLIM4-204ENST00000462597 EIF4A1P60842 406 aaKnown RBP24.2■■□□□ 1.46
PDLIM4-204ENST00000462597 CNBD1Q8NA66 436 aa24.2■■□□□ 1.46
PDLIM4-204ENST00000462597 RNF181Q9P0P0 153 aa24.2■■□□□ 1.46
PDLIM4-204ENST00000462597 KIF3CO14782 793 aa24.19■■□□□ 1.46
PDLIM4-204ENST00000462597 LMOD3Q0VAK6 560 aa24.19■■□□□ 1.46
PDLIM4-204ENST00000462597 TTLL6Q8N841 843 aa24.19■■□□□ 1.46
PDLIM4-204ENST00000462597 BRIP1Q9BX63 1249 aa24.19■■□□□ 1.46
PDLIM4-204ENST00000462597 NPHP1O15259 732 aa24.18■■□□□ 1.46
PDLIM4-204ENST00000462597 PDE6BP35913 854 aa24.17■■□□□ 1.46
PDLIM4-204ENST00000462597 NGEFQ8N5V2 710 aa24.17■■□□□ 1.46
PDLIM4-204ENST00000462597 ZNF622Q969S3 477 aaKnown RBP eCLIP24.17■■□□□ 1.46
PDLIM4-204ENST00000462597 ZNF652Q9Y2D9 606 aa24.17■■□□□ 1.46
PDLIM4-204ENST00000462597 CCDC88AQ3V6T2 1871 aa24.17■■□□□ 1.46
PDLIM4-204ENST00000462597 CLEC4GQ6UXB4 293 aa24.16■■□□□ 1.46
PDLIM4-204ENST00000462597 NMRK2Q9NPI5 230 aa24.16■■□□□ 1.46
PDLIM4-204ENST00000462597 ZNF219Q9P2Y4 722 aaPredicted RBP24.16■■□□□ 1.46
PDLIM4-204ENST00000462597 TRIM35Q9UPQ4 493 aa24.16■■□□□ 1.46
PDLIM4-204ENST00000462597 TIAM2Q8IVF5 1701 aa24.15■■□□□ 1.46
PDLIM4-204ENST00000462597 PRELPP51888 382 aa24.15■■□□□ 1.46
PDLIM4-204ENST00000462597 ST5P78524 1137 aa24.15■■□□□ 1.46
PDLIM4-204ENST00000462597 HLFQ16534 295 aa24.15■■□□□ 1.46
PDLIM4-204ENST00000462597 TSPYL4Q9UJ04 414 aa24.15■■□□□ 1.46
PDLIM4-204ENST00000462597 ARFGEF2Q9Y6D5 1785 aa24.14■■□□□ 1.46
PDLIM4-204ENST00000462597 NBPF5PQ86XG9 351 aaPredicted RBP24.14■■□□□ 1.45
PDLIM4-204ENST00000462597 NIP7Q9Y221 180 aaKnown RBP eCLIP24.14■■□□□ 1.45
PDLIM4-204ENST00000462597 NUP98P52948 1817 aa24.14■■□□□ 1.45
PDLIM4-204ENST00000462597 SLX4Q8IY92 1834 aa24.14■■□□□ 1.45
PDLIM4-204ENST00000462597 FAM177BA6PVY3 158 aa24.13■■□□□ 1.45
PDLIM4-204ENST00000462597 MYL6BP14649 208 aa24.13■■□□□ 1.45
PDLIM4-204ENST00000462597 SALL2Q9Y467 1007 aaPredicted RBP24.13■■□□□ 1.45
PDLIM4-204ENST00000462597 CEP350Q5VT06 3117 aa24.13■■□□□ 1.45
PDLIM4-204ENST00000462597 NFKBIEO00221 500 aa24.12■■□□□ 1.45
PDLIM4-204ENST00000462597 TNRC6CQ9HCJ0 1690 aaKnown RBP24.11■■□□□ 1.45
PDLIM4-204ENST00000462597 FER1L6Q2WGJ9 1857 aa24.11■■□□□ 1.45
PDLIM4-204ENST00000462597 C21orf2O43822 256 aa24.11■■□□□ 1.45
PDLIM4-204ENST00000462597 TTLL7Q6ZT98 887 aa24.11■■□□□ 1.45
PDLIM4-204ENST00000462597 PDZRN3Q9UPQ7 1066 aa24.11■■□□□ 1.45
PDLIM4-204ENST00000462597 SRGNP10124 158 aa24.1■■□□□ 1.45
PDLIM4-204ENST00000462597 RGL2O15211 777 aa24.08■■□□□ 1.45
PDLIM4-204ENST00000462597 LMNB1P20700 586 aa24.08■■□□□ 1.45
PDLIM4-204ENST00000462597 STYK1Q6J9G0 422 aa24.08■■□□□ 1.45
PDLIM4-204ENST00000462597 PRPF40BQ6NWY9 871 aaKnown RBP24.08■■□□□ 1.45
PDLIM4-204ENST00000462597 ZBTB3Q9H5J0 574 aa24.08■■□□□ 1.45
PDLIM4-204ENST00000462597 MAP3K15Q6ZN16 1313 aa24.08■■□□□ 1.44
PDLIM4-204ENST00000462597 CCDC27Q2M243 656 aa24.07■■□□□ 1.44
PDLIM4-204ENST00000462597 KIF6Q6ZMV9 814 aa24.07■■□□□ 1.44
PDLIM4-204ENST00000462597 EIF2S2P20042 333 aaKnown RBP24.06■■□□□ 1.44
PDLIM4-204ENST00000462597 TPTE2Q6XPS3 522 aa24.06■■□□□ 1.44
PDLIM4-204ENST00000462597 MASTLQ96GX5 879 aa24.06■■□□□ 1.44
PDLIM4-204ENST00000462597 KDM2BQ8NHM5 1336 aa24.06■■□□□ 1.44
PDLIM4-204ENST00000462597 ABCC12Q96J65 1359 aa24.05■■□□□ 1.44
PDLIM4-204ENST00000462597 HSPA6P17066 643 aa24.05■■□□□ 1.44
PDLIM4-204ENST00000462597 NCBP3Q53F19 620 aaKnown RBP24.05■■□□□ 1.44
PDLIM4-204ENST00000462597 WWC1Q8IX03 1113 aa24.05■■□□□ 1.44
PDLIM4-204ENST00000462597 CNKSR1Q969H4 720 aa24.05■■□□□ 1.44
PDLIM4-204ENST00000462597 DICER1Q9UPY3 1922 aaKnown RBP24.04■■□□□ 1.44
PDLIM4-204ENST00000462597 ERVV-1B6SEH8 477 aa24.04■■□□□ 1.44
PDLIM4-204ENST00000462597 ANXA1P04083 346 aa24.04■■□□□ 1.44
PDLIM4-204ENST00000462597 GPTP24298 496 aa24.04■■□□□ 1.44
PDLIM4-204ENST00000462597 KRT24Q2M2I5 525 aa24.04■■□□□ 1.44
PDLIM4-204ENST00000462597 PROSER3Q2NL68 480 aa24.04■■□□□ 1.44
PDLIM4-204ENST00000462597 NECTIN2Q92692 538 aa24.04■■□□□ 1.44
PDLIM4-204ENST00000462597 LAS1LQ9Y4W2 734 aaKnown RBP24.04■■□□□ 1.44
PDLIM4-204ENST00000462597 ERBB4Q15303 1308 aa24.04■■□□□ 1.44
PDLIM4-204ENST00000462597 TOMM70O94826 608 aa24.03■■□□□ 1.44
PDLIM4-204ENST00000462597 PDIA6Q15084 440 aa24.03■■□□□ 1.44
PDLIM4-204ENST00000462597 NUTM1Q86Y26 1132 aa24.03■■□□□ 1.44
PDLIM4-204ENST00000462597 RRAGCQ9HB90 399 aa24.03■■□□□ 1.44
PDLIM4-204ENST00000462597 BABAM1Q9NWV8 329 aa24.03■■□□□ 1.44
PDLIM4-204ENST00000462597 UBN2Q6ZU65 1347 aa24.03■■□□□ 1.44
PDLIM4-204ENST00000462597 GTF2E1P29083 439 aaPredicted RBP24.02■■□□□ 1.44
PDLIM4-204ENST00000462597 CALD1Q05682 793 aaKnown RBP24.02■■□□□ 1.44
PDLIM4-204ENST00000462597 LRP10Q7Z4F1 713 aa24.02■■□□□ 1.44
PDLIM4-204ENST00000462597 ZC3H4Q9UPT8 1303 aaKnown RBP24.02■■□□□ 1.44
PDLIM4-204ENST00000462597 KLRG2A4D1S0 409 aaPredicted RBP24.01■■□□□ 1.43
PDLIM4-204ENST00000462597 NPR1P16066 1061 aa24.01■■□□□ 1.43
PDLIM4-204ENST00000462597 CHL1O00533 1208 aa24■■□□□ 1.43
PDLIM4-204ENST00000462597 ERFEQ4G0M1 354 aa24■■□□□ 1.43
PDLIM4-204ENST00000462597 C16orf71Q8IYS4 520 aaPredicted RBP24■■□□□ 1.43
PDLIM4-204ENST00000462597 ANKRD36CQ5JPF3 1778 aa23.99■■□□□ 1.43
PDLIM4-204ENST00000462597 OLFM4Q6UX06 510 aa23.99■■□□□ 1.43
PDLIM4-204ENST00000462597 NYXQ9GZU5 481 aa23.99■■□□□ 1.43
PDLIM4-204ENST00000462597 TAOK3Q9H2K8 898 aa23.99■■□□□ 1.43
PDLIM4-204ENST00000462597 HNRNPUQ00839 825 aaKnown RBP eCLIP23.98■■□□□ 1.43
PDLIM4-204ENST00000462597 SUSD4Q5VX71 490 aa23.98■■□□□ 1.43
PDLIM4-204ENST00000462597 GIGYF2Q6Y7W6 1299 aaKnown RBP23.98■■□□□ 1.43
PDLIM4-204ENST00000462597 C7orf43Q8WVR3 580 aa23.98■■□□□ 1.43
PDLIM4-204ENST00000462597 CFAP44Q96MT7 982 aa23.98■■□□□ 1.43
PDLIM4-204ENST00000462597 IFT57Q9NWB7 429 aa23.98■■□□□ 1.43
PDLIM4-204ENST00000462597 LTBP3Q9NS15 1303 aa23.98■■□□□ 1.43
PDLIM4-204ENST00000462597 GLTPD2A6NH11 291 aa23.97■■□□□ 1.43
PDLIM4-204ENST00000462597 ZNF34Q8IZ26 560 aa23.97■■□□□ 1.43
PDLIM4-204ENST00000462597 IBTKQ9P2D0 1353 aaPredicted RBP23.96■■□□□ 1.43
PDLIM4-204ENST00000462597 ZNF521Q96K83 1311 aa23.96■■□□□ 1.43
PDLIM4-204ENST00000462597 GNAI1P63096 354 aa23.96■■□□□ 1.43
PDLIM4-204ENST00000462597 WDR63Q8IWG1 891 aa23.96■■□□□ 1.43
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms