RNA–Protein interactions for RNA: ENST00000462309.1

COL4A2-203, Transcript of collagen type IV alpha 2 chain, humanhuman

TSL 3

Gene COL4A2, Length 725 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A2-203ENST00000462309 VAMP1P23763 118 aa12.47□□□□□ -0.41
COL4A2-203ENST00000462309 DMRTB1Q96MA1 342 aa12.47□□□□□ -0.41
COL4A2-203ENST00000462309 CAPN5O15484 640 aaPredicted RBP12.46□□□□□ -0.41
COL4A2-203ENST00000462309 MZF1P28698 734 aaPredicted RBP12.46□□□□□ -0.41
COL4A2-203ENST00000462309 LINC00528Q8N1L1 170 aa12.46□□□□□ -0.41
COL4A2-203ENST00000462309 CTSOP43234 321 aaPredicted RBP12.45□□□□□ -0.42
COL4A2-203ENST00000462309 PLCB3Q01970 1234 aa12.45□□□□□ -0.42
COL4A2-203ENST00000462309 PDE3BQ13370 1112 aa12.45□□□□□ -0.42
COL4A2-203ENST00000462309 ZDHHC3Q9NYG2 299 aa12.45□□□□□ -0.42
COL4A2-203ENST00000462309 BCS1LQ9Y276 419 aa12.45□□□□□ -0.42
COL4A2-203ENST00000462309 ZAP70P43403 619 aa12.44□□□□□ -0.42
COL4A2-203ENST00000462309 PLA2G4AP47712 749 aa12.44□□□□□ -0.42
COL4A2-203ENST00000462309 GJD3Q8N144 294 aa12.44□□□□□ -0.42
COL4A2-203ENST00000462309 TMC1Q8TDI8 760 aa12.44□□□□□ -0.42
COL4A2-203ENST00000462309 ALKBH8Q96BT7 664 aaKnown RBP12.44□□□□□ -0.42
COL4A2-203ENST00000462309 POLIQ9UNA4 740 aa12.44□□□□□ -0.42
COL4A2-203ENST00000462309 POLMQ9NP87 494 aaPredicted RBP12.43□□□□□ -0.42
COL4A2-203ENST00000462309 GPR182O15218 404 aa12.42□□□□□ -0.42
COL4A2-203ENST00000462309 PDGFAP04085 211 aa12.42□□□□□ -0.42
COL4A2-203ENST00000462309 USP5P45974 858 aa12.42□□□□□ -0.42
COL4A2-203ENST00000462309 EHHADHQ08426 723 aa12.42□□□□□ -0.42
COL4A2-203ENST00000462309 TREML1Q86YW5 311 aa12.42□□□□□ -0.42
COL4A2-203ENST00000462309 UPP2O95045 317 aa12.41□□□□□ -0.42
COL4A2-203ENST00000462309 DNM1Q05193 864 aaKnown RBP12.41□□□□□ -0.42
COL4A2-203ENST00000462309 WDR44Q5JSH3 913 aa12.41□□□□□ -0.42
COL4A2-203ENST00000462309 EDEM1Q92611 657 aa12.41□□□□□ -0.42
COL4A2-203ENST00000462309 GPC6Q9Y625 555 aaPredicted RBP12.41□□□□□ -0.42
COL4A2-203ENST00000462309 PHKA2P46019 1235 aa12.4□□□□□ -0.42
COL4A2-203ENST00000462309 POU4F2Q12837 409 aa12.4□□□□□ -0.42
COL4A2-203ENST00000462309 NBPF1Q3BBV0 1214 aa12.4□□□□□ -0.42
COL4A2-203ENST00000462309 RHPN1Q8TCX5 695 aa12.4□□□□□ -0.42
COL4A2-203ENST00000462309 AIDAQ96BJ3 306 aa12.4□□□□□ -0.42
COL4A2-203ENST00000462309 MICAL2O94851 1124 aa12.39□□□□□ -0.43
COL4A2-203ENST00000462309 HIF1AQ16665 826 aa12.39□□□□□ -0.43
COL4A2-203ENST00000462309 NBPF10Q6P3W6 841 aaKnown RBP12.39□□□□□ -0.43
COL4A2-203ENST00000462309 RNF217Q8TC41 542 aa12.39□□□□□ -0.43
COL4A2-203ENST00000462309 KLRG1Q96E93 195 aa12.39□□□□□ -0.43
COL4A2-203ENST00000462309 DMGDHQ9UI17 866 aaKnown RBP12.39□□□□□ -0.43
COL4A2-203ENST00000462309 TGFBR3LH3BV60 316 aa12.38□□□□□ -0.43
COL4A2-203ENST00000462309 SUSD3Q96L08 255 aa12.38□□□□□ -0.43
COL4A2-203ENST00000462309 NIF3L1Q9GZT8 377 aa12.38□□□□□ -0.43
COL4A2-203ENST00000462309 AVPP01185 164 aa12.37□□□□□ -0.43
COL4A2-203ENST00000462309 BMP2P12643 396 aa12.37□□□□□ -0.43
COL4A2-203ENST00000462309 IER5Q5VY09 327 aa12.37□□□□□ -0.43
COL4A2-203ENST00000462309 MRPL14Q6P1L8 145 aaKnown RBP12.37□□□□□ -0.43
COL4A2-203ENST00000462309 PRICKLE2Q7Z3G6 844 aa12.37□□□□□ -0.43
COL4A2-203ENST00000462309 OPLAHO14841 1288 aa12.36□□□□□ -0.43
COL4A2-203ENST00000462309 LDHBP07195 334 aaKnown RBP12.36□□□□□ -0.43
COL4A2-203ENST00000462309 TATP17735 454 aaPredicted RBP12.36□□□□□ -0.43
COL4A2-203ENST00000462309 MAPK8P45983 427 aa12.36□□□□□ -0.43
COL4A2-203ENST00000462309 FGD1P98174 961 aa12.36□□□□□ -0.43
COL4A2-203ENST00000462309 LYSMD3Q7Z3D4 306 aa12.36□□□□□ -0.43
COL4A2-203ENST00000462309 ZNF280CQ8ND82 737 aa12.36□□□□□ -0.43
COL4A2-203ENST00000462309 GPR152Q8TDT2 470 aa12.36□□□□□ -0.43
COL4A2-203ENST00000462309 FAM13BQ9NYF5 915 aa12.36□□□□□ -0.43
COL4A2-203ENST00000462309 PRPF40AO75400 957 aaKnown RBP12.35□□□□□ -0.43
COL4A2-203ENST00000462309 ATP4AP20648 1035 aa12.35□□□□□ -0.43
COL4A2-203ENST00000462309 C6orf118Q5T5N4 469 aa12.35□□□□□ -0.43
COL4A2-203ENST00000462309 NUDT16Q96DE0 195 aaKnown RBP12.35□□□□□ -0.43
COL4A2-203ENST00000462309 GGNBP2Q9H3C7 697 aa12.35□□□□□ -0.43
COL4A2-203ENST00000462309 PDZRN3Q9UPQ7 1066 aa12.35□□□□□ -0.43
COL4A2-203ENST00000462309 PCSK2P16519 638 aa12.34□□□□□ -0.43
COL4A2-203ENST00000462309 MRPL58Q14197 206 aaKnown RBP12.34□□□□□ -0.43
COL4A2-203ENST00000462309 ZIC5Q96T25 663 aa12.34□□□□□ -0.43
COL4A2-203ENST00000462309 ANKIB1Q9P2G1 1089 aa12.34□□□□□ -0.43
COL4A2-203ENST00000462309 LCE2BO14633 110 aa12.33□□□□□ -0.44
COL4A2-203ENST00000462309 RECKO95980 971 aa12.33□□□□□ -0.44
COL4A2-203ENST00000462309 ENOX2Q16206 610 aaKnown RBP12.33□□□□□ -0.44
COL4A2-203ENST00000462309 WWC3Q9ULE0 1092 aa12.33□□□□□ -0.44
COL4A2-203ENST00000462309 GFRA3O60609 400 aa12.32□□□□□ -0.44
COL4A2-203ENST00000462309 RPLP1P05386 114 aaKnown RBP12.32□□□□□ -0.44
COL4A2-203ENST00000462309 TCF3P15923 654 aa12.32□□□□□ -0.44
COL4A2-203ENST00000462309 PIK3R5Q8WYR1 880 aa12.32□□□□□ -0.44
COL4A2-203ENST00000462309 HSH2DQ96JZ2 352 aa12.32□□□□□ -0.44
COL4A2-203ENST00000462309 BCL11AQ9H165 835 aa12.32□□□□□ -0.44
COL4A2-203ENST00000462309 A0A1B0GTH6 734 aa12.31□□□□□ -0.44
COL4A2-203ENST00000462309 TTLL8A6PVC2 850 aa12.31□□□□□ -0.44
COL4A2-203ENST00000462309 MSX1P28360 303 aa12.31□□□□□ -0.44
COL4A2-203ENST00000462309 PARP2Q9UGN5 583 aa12.31□□□□□ -0.44
COL4A2-203ENST00000462309 SOS2Q07890 1332 aaPredicted RBP12.31□□□□□ -0.44
COL4A2-203ENST00000462309 INPP5BP32019 993 aa12.3□□□□□ -0.44
COL4A2-203ENST00000462309 SMCPP49901 116 aaPredicted RBP12.3□□□□□ -0.44
COL4A2-203ENST00000462309 IDH3AP50213 366 aa12.3□□□□□ -0.44
COL4A2-203ENST00000462309 SCARF1Q14162 830 aa12.3□□□□□ -0.44
COL4A2-203ENST00000462309 BICDL1Q6ZP65 573 aa12.3□□□□□ -0.44
COL4A2-203ENST00000462309 DUSP9Q99956 384 aaKnown RBP12.3□□□□□ -0.44
COL4A2-203ENST00000462309 TIMMDC1Q9NPL8 285 aa12.3□□□□□ -0.44
COL4A2-203ENST00000462309 RHOQP17081 205 aa12.29□□□□□ -0.44
COL4A2-203ENST00000462309 TRIM46Q7Z4K8 759 aa12.29□□□□□ -0.44
COL4A2-203ENST00000462309 BTLAQ7Z6A9 289 aa12.29□□□□□ -0.44
COL4A2-203ENST00000462309 CSRNP1Q96S65 589 aa12.29□□□□□ -0.44
COL4A2-203ENST00000462309 SETDB2Q96T68 719 aa12.29□□□□□ -0.44
COL4A2-203ENST00000462309 RNF19AQ9NV58 838 aa12.29□□□□□ -0.44
COL4A2-203ENST00000462309 PNMA6FA0A0J9YX94 578 aa12.28□□□□□ -0.44
COL4A2-203ENST00000462309 FAM187AA6NFU0 413 aa12.28□□□□□ -0.44
COL4A2-203ENST00000462309 DAB2P98082 770 aa12.28□□□□□ -0.44
COL4A2-203ENST00000462309 ATP2B2Q01814 1243 aa12.28□□□□□ -0.44
COL4A2-203ENST00000462309 XPCQ01831 940 aaPredicted RBP12.28□□□□□ -0.44
COL4A2-203ENST00000462309 C8orf34Q49A92 452 aa12.28□□□□□ -0.44
COL4A2-203ENST00000462309 ALG1LQ6GMV1 187 aa12.28□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms