RNA–Protein interactions for RNA: ENST00000462236.1

COPS3-204, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 5

Gene COPS3, Length 551 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-204ENST00000462236 IGFBP4P22692 258 aa8.12□□□□□ -1.11
COPS3-204ENST00000462236 ATP2B4P23634 1241 aa8.12□□□□□ -1.11
COPS3-204ENST00000462236 WEE1P30291 646 aa8.12□□□□□ -1.11
COPS3-204ENST00000462236 LINC00528Q8N1L1 170 aa8.12□□□□□ -1.11
COPS3-204ENST00000462236 STAG2Q8N3U4 1231 aa8.12□□□□□ -1.11
COPS3-204ENST00000462236 NBPF15Q8N660 670 aa8.12□□□□□ -1.11
COPS3-204ENST00000462236 RNF144AP50876 292 aaPredicted RBP8.11□□□□□ -1.11
COPS3-204ENST00000462236 FOXK2Q01167 660 aa8.11□□□□□ -1.11
COPS3-204ENST00000462236 RELBQ01201 579 aa8.11□□□□□ -1.11
COPS3-204ENST00000462236 OCLNQ16625 522 aa8.11□□□□□ -1.11
COPS3-204ENST00000462236 TSEN2Q8NCE0 465 aaKnown RBP8.11□□□□□ -1.11
COPS3-204ENST00000462236 AGBL1Q96MI9 1066 aa8.11□□□□□ -1.11
COPS3-204ENST00000462236 CXXC1Q9P0U4 656 aaPredicted RBP8.11□□□□□ -1.11
COPS3-204ENST00000462236 SCHIP1Q9P0W5 487 aaPredicted RBP8.11□□□□□ -1.11
COPS3-204ENST00000462236 PTPRTO14522 1441 aa8.11□□□□□ -1.11
COPS3-204ENST00000462236 ZBTB7CA1YPR0 619 aa8.1□□□□□ -1.11
COPS3-204ENST00000462236 FOXO3O43524 673 aa8.1□□□□□ -1.11
COPS3-204ENST00000462236 GTF2E1P29083 439 aaPredicted RBP8.1□□□□□ -1.11
COPS3-204ENST00000462236 CENPCQ03188 943 aa8.1□□□□□ -1.11
COPS3-204ENST00000462236 TLR1Q15399 786 aa8.1□□□□□ -1.11
COPS3-204ENST00000462236 MRPL14Q6P1L8 145 aaKnown RBP8.1□□□□□ -1.11
COPS3-204ENST00000462236 COL26A1Q96A83 441 aa8.1□□□□□ -1.11
COPS3-204ENST00000462236 FHDC1Q9C0D6 1143 aaPredicted RBP8.1□□□□□ -1.11
COPS3-204ENST00000462236 RAB6BQ9NRW1 208 aa8.1□□□□□ -1.11
COPS3-204ENST00000462236 SERTAD1Q9UHV2 236 aa8.1□□□□□ -1.11
COPS3-204ENST00000462236 MTMR7Q9Y216 660 aa8.1□□□□□ -1.11
COPS3-204ENST00000462236 MYO5CQ9NQX4 1742 aa8.09□□□□□ -1.11
COPS3-204ENST00000462236 MEN1O00255 615 aa8.09□□□□□ -1.11
COPS3-204ENST00000462236 SCARF1Q14162 830 aa8.09□□□□□ -1.11
COPS3-204ENST00000462236 TAS1R3Q7RTX0 852 aa8.09□□□□□ -1.11
COPS3-204ENST00000462236 PPARGC1BQ86YN6 1023 aaKnown RBP8.09□□□□□ -1.11
COPS3-204ENST00000462236 TNS4Q8IZW8 715 aa8.09□□□□□ -1.11
COPS3-204ENST00000462236 UTP3Q9NQZ2 479 aaKnown RBP eCLIP8.09□□□□□ -1.11
COPS3-204ENST00000462236 SLAIN2Q9P270 581 aa8.09□□□□□ -1.11
COPS3-204ENST00000462236 GNEQ9Y223 722 aaKnown RBP8.09□□□□□ -1.11
COPS3-204ENST00000462236 REREQ9P2R6 1566 aa8.09□□□□□ -1.11
COPS3-204ENST00000462236 ATP10AO60312 1499 aa8.08□□□□□ -1.12
COPS3-204ENST00000462236 AXIN1O15169 862 aa8.08□□□□□ -1.12
COPS3-204ENST00000462236 PTCD1O75127 700 aaKnown RBP8.08□□□□□ -1.12
COPS3-204ENST00000462236 STAU1O95793 577 aaKnown RBP8.08□□□□□ -1.12
COPS3-204ENST00000462236 ARID4AP29374 1257 aaPredicted RBP8.08□□□□□ -1.12
COPS3-204ENST00000462236 PHLDB3Q6NSJ2 640 aa8.08□□□□□ -1.12
COPS3-204ENST00000462236 GRIP2Q9C0E4 1043 aa8.08□□□□□ -1.12
COPS3-204ENST00000462236 ZNF395Q9H8N7 513 aaPredicted RBP8.08□□□□□ -1.12
COPS3-204ENST00000462236 CHMP3Q9Y3E7 222 aa8.08□□□□□ -1.12
COPS3-204ENST00000462236 KDM5CP41229 1560 aa8.08□□□□□ -1.12
COPS3-204ENST00000462236 ATAD2Q6PL18 1390 aa8.08□□□□□ -1.12
COPS3-204ENST00000462236 C9orf84Q5VXU9 1444 aa8.07□□□□□ -1.12
COPS3-204ENST00000462236 CARNS1A5YM72 827 aa8.07□□□□□ -1.12
COPS3-204ENST00000462236 PRMT3O60678 531 aa8.07□□□□□ -1.12
COPS3-204ENST00000462236 PSMA6P60900 246 aaKnown RBP8.07□□□□□ -1.12
COPS3-204ENST00000462236 WDR44Q5JSH3 913 aa8.07□□□□□ -1.12
COPS3-204ENST00000462236 POTEAQ6S8J7 498 aa8.07□□□□□ -1.12
COPS3-204ENST00000462236 CCER1Q8TC90 406 aaPredicted RBP8.07□□□□□ -1.12
COPS3-204ENST00000462236 ZSCAN10Q96SZ4 725 aaPredicted RBP8.07□□□□□ -1.12
COPS3-204ENST00000462236 IQSEC3Q9UPP2 1182 aaPredicted RBP8.07□□□□□ -1.12
COPS3-204ENST00000462236 BMP2P12643 396 aa8.06□□□□□ -1.12
COPS3-204ENST00000462236 HIRAP54198 1017 aaPredicted RBP8.06□□□□□ -1.12
COPS3-204ENST00000462236 TEAD4Q15561 434 aa8.06□□□□□ -1.12
COPS3-204ENST00000462236 SLC9A9Q8IVB4 645 aa8.06□□□□□ -1.12
COPS3-204ENST00000462236 RHBDD1Q8TEB9 315 aa8.06□□□□□ -1.12
COPS3-204ENST00000462236 SCG3Q8WXD2 468 aaKnown RBP8.06□□□□□ -1.12
COPS3-204ENST00000462236 IRX2Q9BZI1 471 aaPredicted RBP8.06□□□□□ -1.12
COPS3-204ENST00000462236 TSPAN10Q9H1Z9 355 aaPredicted RBP8.06□□□□□ -1.12
COPS3-204ENST00000462236 DIP2CQ9Y2E4 1556 aa8.05□□□□□ -1.12
COPS3-204ENST00000462236 PLCH2O75038 1416 aa8.05□□□□□ -1.12
COPS3-204ENST00000462236 UHRF1BP1Q6BDS2 1440 aa8.05□□□□□ -1.12
COPS3-204ENST00000462236 SPATA31C2B4DYI2 1134 aa8.05□□□□□ -1.12
COPS3-204ENST00000462236 GNASQ5JWF2 1037 aa8.05□□□□□ -1.12
COPS3-204ENST00000462236 SLC27A3Q5K4L6 730 aa8.05□□□□□ -1.12
COPS3-204ENST00000462236 TXNDC2Q86VQ3 553 aa8.05□□□□□ -1.12
COPS3-204ENST00000462236 AEBP1Q8IUX7 1158 aa8.05□□□□□ -1.12
COPS3-204ENST00000462236 PRIMPOLQ96LW4 560 aa8.05□□□□□ -1.12
COPS3-204ENST00000462236 INSM2Q96T92 566 aaPredicted RBP8.05□□□□□ -1.12
COPS3-204ENST00000462236 NIFKQ9BYG3 293 aaKnown RBP8.05□□□□□ -1.12
COPS3-204ENST00000462236 POLMQ9NP87 494 aaPredicted RBP8.05□□□□□ -1.12
COPS3-204ENST00000462236 CDC42BPBQ9Y5S2 1711 aa8.05□□□□□ -1.12
COPS3-204ENST00000462236 MROH2AA6NES4 1674 aa8.05□□□□□ -1.12
COPS3-204ENST00000462236 C21orf2O43822 256 aa8.04□□□□□ -1.12
COPS3-204ENST00000462236 PPP1R12BO60237 982 aaPredicted RBP8.04□□□□□ -1.12
COPS3-204ENST00000462236 TMEM214Q6NUQ4 689 aaKnown RBP8.04□□□□□ -1.12
COPS3-204ENST00000462236 C2orf49Q9BVC5 232 aaPredicted RBP8.04□□□□□ -1.12
COPS3-204ENST00000462236 ZNF142P52746 1687 aaPredicted RBP8.04□□□□□ -1.12
COPS3-204ENST00000462236 SOS2Q07890 1332 aaPredicted RBP8.03□□□□□ -1.12
COPS3-204ENST00000462236 NCOA1Q15788 1441 aa8.03□□□□□ -1.12
COPS3-204ENST00000462236 SCAPERQ9BY12 1400 aa8.03□□□□□ -1.12
COPS3-204ENST00000462236 AGLP35573 1532 aa8.03□□□□□ -1.12
COPS3-204ENST00000462236 ABCA6Q8N139 1617 aa8.03□□□□□ -1.12
COPS3-204ENST00000462236 SUPT6HQ7KZ85 1726 aaKnown RBP8.03□□□□□ -1.12
COPS3-204ENST00000462236 LRRIQ1Q96JM4 1722 aa8.03□□□□□ -1.12
COPS3-204ENST00000462236 CTSOP43234 321 aaPredicted RBP8.03□□□□□ -1.12
COPS3-204ENST00000462236 CEBPAP49715 358 aaPredicted RBP8.03□□□□□ -1.12
COPS3-204ENST00000462236 FOXD4L5Q5VV16 416 aaPredicted RBP8.03□□□□□ -1.12
COPS3-204ENST00000462236 TRIM46Q7Z4K8 759 aa8.03□□□□□ -1.12
COPS3-204ENST00000462236 ZNF295-AS1Q8N0V1 137 aa8.03□□□□□ -1.12
COPS3-204ENST00000462236 AAASQ9NRG9 546 aa8.03□□□□□ -1.12
COPS3-204ENST00000462236 KIDINS220Q9ULH0 1771 aa8.02□□□□□ -1.13
COPS3-204ENST00000462236 SERTM1A2A2V5 107 aa8.02□□□□□ -1.13
COPS3-204ENST00000462236 PLEKHD1A6NEE1 506 aa8.02□□□□□ -1.13
COPS3-204ENST00000462236 TTLL8A6PVC2 850 aa8.02□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms