RNA–Protein interactions for RNA: ENST00000461889.1

TRAPPC10-205, Transcript of trafficking protein particle complex 10, humanhuman

TSL 2

Gene TRAPPC10, Length 563 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC10-205ENST00000461889 FZD9O00144 591 aa10.03□□□□□ -0.8
TRAPPC10-205ENST00000461889 TRPA1O75762 1119 aa10.03□□□□□ -0.8
TRAPPC10-205ENST00000461889 FBXO46Q6PJ61 603 aaPredicted RBP10.03□□□□□ -0.8
TRAPPC10-205ENST00000461889 PRDM6Q9NQX0 595 aa10.03□□□□□ -0.8
TRAPPC10-205ENST00000461889 CELF2O95319 508 aaKnown RBP10.02□□□□□ -0.81
TRAPPC10-205ENST00000461889 SERPINB2P05120 415 aa10.02□□□□□ -0.81
TRAPPC10-205ENST00000461889 NFIXQ14938 502 aa10.02□□□□□ -0.81
TRAPPC10-205ENST00000461889 BICDL1Q6ZP65 573 aa10.02□□□□□ -0.81
TRAPPC10-205ENST00000461889 USP50Q70EL3 339 aaPredicted RBP10.02□□□□□ -0.81
TRAPPC10-205ENST00000461889 FAM155AB1AL88 458 aaPredicted RBP10.01□□□□□ -0.81
TRAPPC10-205ENST00000461889 INTS3Q68E01 1043 aaKnown RBP10.01□□□□□ -0.81
TRAPPC10-205ENST00000461889 USHBP1Q8N6Y0 703 aa10.01□□□□□ -0.81
TRAPPC10-205ENST00000461889 ZNF622Q969S3 477 aaKnown RBP eCLIP10.01□□□□□ -0.81
TRAPPC10-205ENST00000461889 AKAP11Q9UKA4 1901 aa10.01□□□□□ -0.81
TRAPPC10-205ENST00000461889 ZPR1O75312 459 aa10□□□□□ -0.81
TRAPPC10-205ENST00000461889 AMPHP49418 695 aa10□□□□□ -0.81
TRAPPC10-205ENST00000461889 RTL1A6NKG5 1358 aa10□□□□□ -0.81
TRAPPC10-205ENST00000461889 CARMIL3Q8ND23 1372 aa10□□□□□ -0.81
TRAPPC10-205ENST00000461889 BRCA2P51587 3418 aa10□□□□□ -0.81
TRAPPC10-205ENST00000461889 RBBP6Q7Z6E9 1792 aaKnown RBP9.99□□□□□ -0.81
TRAPPC10-205ENST00000461889 POTEFA5A3E0 1075 aa9.99□□□□□ -0.81
TRAPPC10-205ENST00000461889 MYCNP04198 464 aaPredicted RBP9.99□□□□□ -0.81
TRAPPC10-205ENST00000461889 LMOD1P29536 600 aaPredicted RBP9.99□□□□□ -0.81
TRAPPC10-205ENST00000461889 PDE6BP35913 854 aa9.99□□□□□ -0.81
TRAPPC10-205ENST00000461889 CRKLP46109 303 aaKnown RBP9.99□□□□□ -0.81
TRAPPC10-205ENST00000461889 KIF23Q02241 960 aaPredicted RBP9.99□□□□□ -0.81
TRAPPC10-205ENST00000461889 USPL1Q5W0Q7 1092 aa9.99□□□□□ -0.81
TRAPPC10-205ENST00000461889 CNKSR1Q969H4 720 aa9.99□□□□□ -0.81
TRAPPC10-205ENST00000461889 CCDC102AQ96A19 550 aa9.99□□□□□ -0.81
TRAPPC10-205ENST00000461889 BRIP1Q9BX63 1249 aa9.99□□□□□ -0.81
TRAPPC10-205ENST00000461889 SCN11AQ9UI33 1791 aa9.98□□□□□ -0.81
TRAPPC10-205ENST00000461889 FKBP4Q02790 459 aaKnown RBP eCLIP9.98□□□□□ -0.81
TRAPPC10-205ENST00000461889 NOM1Q5C9Z4 860 aaKnown RBP9.98□□□□□ -0.81
TRAPPC10-205ENST00000461889 C7orf43Q8WVR3 580 aa9.98□□□□□ -0.81
TRAPPC10-205ENST00000461889 PGAP2Q9UHJ9 254 aa9.98□□□□□ -0.81
TRAPPC10-205ENST00000461889 HDAC9Q9UKV0 1011 aa9.98□□□□□ -0.81
TRAPPC10-205ENST00000461889 KIAA0100Q14667 2235 aaKnown RBP9.98□□□□□ -0.81
TRAPPC10-205ENST00000461889 SLX4Q8IY92 1834 aa9.98□□□□□ -0.81
TRAPPC10-205ENST00000461889 HTTP42858 3142 aa9.97□□□□□ -0.81
TRAPPC10-205ENST00000461889 H0YGN5 161 aa9.97□□□□□ -0.81
TRAPPC10-205ENST00000461889 EPS15P42566 896 aa9.97□□□□□ -0.81
TRAPPC10-205ENST00000461889 SCNN1DP51172 638 aa9.97□□□□□ -0.81
TRAPPC10-205ENST00000461889 CLCN6P51797 869 aa9.97□□□□□ -0.81
TRAPPC10-205ENST00000461889 STYK1Q6J9G0 422 aa9.97□□□□□ -0.81
TRAPPC10-205ENST00000461889 RGMBQ6NW40 437 aa9.97□□□□□ -0.81
TRAPPC10-205ENST00000461889 SYNE4Q8N205 404 aa9.97□□□□□ -0.81
TRAPPC10-205ENST00000461889 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP9.97□□□□□ -0.812e-6■□□□□ 8.4
TRAPPC10-205ENST00000461889 RBM27Q9P2N5 1060 aaKnown RBP9.97□□□□□ -0.81
TRAPPC10-205ENST00000461889 SPG7Q9UQ90 795 aa9.97□□□□□ -0.81
TRAPPC10-205ENST00000461889 VCANP13611 3396 aa9.97□□□□□ -0.81
TRAPPC10-205ENST00000461889 ANKRD31Q8N7Z5 1873 aa9.97□□□□□ -0.81
TRAPPC10-205ENST00000461889 EDC4Q6P2E9 1401 aaKnown RBP9.97□□□□□ -0.81
TRAPPC10-205ENST00000461889 ARFGEF2Q9Y6D5 1785 aa9.96□□□□□ -0.81
TRAPPC10-205ENST00000461889 HUNKP57058 714 aa9.96□□□□□ -0.82
TRAPPC10-205ENST00000461889 CCDC93Q567U6 631 aa9.96□□□□□ -0.82
TRAPPC10-205ENST00000461889 PRPF40BQ6NWY9 871 aaKnown RBP9.96□□□□□ -0.82
TRAPPC10-205ENST00000461889 ZNF296Q8WUU4 475 aaPredicted RBP9.96□□□□□ -0.82
TRAPPC10-205ENST00000461889 CSRNP1Q96S65 589 aa9.96□□□□□ -0.82
TRAPPC10-205ENST00000461889 NARFQ9UHQ1 456 aa9.96□□□□□ -0.82
TRAPPC10-205ENST00000461889 COL11A2P13942 1736 aaPredicted RBP9.96□□□□□ -0.82
TRAPPC10-205ENST00000461889 COL9A1P20849 921 aa9.95□□□□□ -0.82
TRAPPC10-205ENST00000461889 INTS5Q6P9B9 1019 aaKnown RBP9.95□□□□□ -0.82
TRAPPC10-205ENST00000461889 ZNF277Q9NRM2 450 aaPredicted RBP9.95□□□□□ -0.82
TRAPPC10-205ENST00000461889 BCORQ6W2J9 1755 aa9.95□□□□□ -0.82
TRAPPC10-205ENST00000461889 PAPPA2Q9BXP8 1791 aa9.94□□□□□ -0.82
TRAPPC10-205ENST00000461889 ERVV-2B6SEH9 535 aa9.94□□□□□ -0.82
TRAPPC10-205ENST00000461889 PLA2G5P39877 138 aa9.94□□□□□ -0.82
TRAPPC10-205ENST00000461889 IFNL2Q8IZJ0 200 aa9.94□□□□□ -0.82
TRAPPC10-205ENST00000461889 GLIS2Q9BZE0 524 aaPredicted RBP9.94□□□□□ -0.82
TRAPPC10-205ENST00000461889 PRO3102Q9H379 93 aa9.94□□□□□ -0.82
TRAPPC10-205ENST00000461889 BCL2L12Q9HB09 334 aa9.94□□□□□ -0.82
TRAPPC10-205ENST00000461889 LAMA3Q16787 3333 aa9.94□□□□□ -0.82
TRAPPC10-205ENST00000461889 CENPFP49454 3210 aa9.94□□□□□ -0.82
TRAPPC10-205ENST00000461889 SPTBN5Q9NRC6 3674 aaKnown RBP9.93□□□□□ -0.82
TRAPPC10-205ENST00000461889 NCAPD2Q15021 1401 aa9.93□□□□□ -0.82
TRAPPC10-205ENST00000461889 SOS1Q07889 1333 aaPredicted RBP9.93□□□□□ -0.82
TRAPPC10-205ENST00000461889 ERBB4Q15303 1308 aa9.93□□□□□ -0.82
TRAPPC10-205ENST00000461889 SRGNP10124 158 aa9.93□□□□□ -0.82
TRAPPC10-205ENST00000461889 PHKG2P15735 406 aa9.93□□□□□ -0.82
TRAPPC10-205ENST00000461889 IARSP41252 1262 aaKnown RBP9.93□□□□□ -0.82
TRAPPC10-205ENST00000461889 RTKN2Q8IZC4 609 aa9.93□□□□□ -0.82
TRAPPC10-205ENST00000461889 SPDYE1Q8NFV5 336 aaPredicted RBP9.93□□□□□ -0.82
TRAPPC10-205ENST00000461889 ZC3H15Q8WU90 426 aaKnown RBP9.93□□□□□ -0.82
TRAPPC10-205ENST00000461889 DCBLD2Q96PD2 775 aa9.93□□□□□ -0.82
TRAPPC10-205ENST00000461889 ADARB2Q9NS39 739 aaKnown RBP9.93□□□□□ -0.82
TRAPPC10-205ENST00000461889 STXBP5LQ9Y2K9 1186 aa9.93□□□□□ -0.82
TRAPPC10-205ENST00000461889 CACNA1SQ13698 1873 aa9.93□□□□□ -0.82
TRAPPC10-205ENST00000461889 A0A1W2PP64 1363 aa9.92□□□□□ -0.82
TRAPPC10-205ENST00000461889 EN2P19622 333 aaPredicted RBP9.92□□□□□ -0.82
TRAPPC10-205ENST00000461889 EIF6P56537 245 aaKnown RBP9.92□□□□□ -0.82
TRAPPC10-205ENST00000461889 ANKRD13DQ6ZTN6 518 aa9.92□□□□□ -0.82
TRAPPC10-205ENST00000461889 CDC37L1Q7L3B6 337 aa9.92□□□□□ -0.82
TRAPPC10-205ENST00000461889 JDP2Q8WYK2 163 aa9.92□□□□□ -0.82
TRAPPC10-205ENST00000461889 MASTLQ96GX5 879 aa9.92□□□□□ -0.82
TRAPPC10-205ENST00000461889 GJA3Q9Y6H8 435 aa9.92□□□□□ -0.82
TRAPPC10-205ENST00000461889 A0A1W2PPC1 479 aa9.91□□□□□ -0.82
TRAPPC10-205ENST00000461889 SLC10A3P09131 477 aa9.91□□□□□ -0.82
TRAPPC10-205ENST00000461889 FBLN1P23142 703 aa9.91□□□□□ -0.82
TRAPPC10-205ENST00000461889 GPR153Q6NV75 609 aa9.91□□□□□ -0.82
TRAPPC10-205ENST00000461889 HDGFL2Q7Z4V5 671 aaPredicted RBP9.91□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms