RNA–Protein interactions for RNA: ENST00000461862.5

SCNM1-204, Transcript of sodium channel modifier 1, human

TSL 2

Gene SCNM1, Length 1,094 nt, Biotype processed transcript, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SCNM1-204	ENST00000461862	ATF3	P18847	181 aa		13.8	□□□□□ -0.2
SCNM1-204	ENST00000461862	GJA5	P36382	358 aa		13.8	□□□□□ -0.2
SCNM1-204	ENST00000461862	ZNF787	Q6DD87	383 aa		13.8	□□□□□ -0.2
SCNM1-204	ENST00000461862	BRINP3	Q76B58	766 aa		13.8	□□□□□ -0.2
SCNM1-204	ENST00000461862	PRR7	Q8TB68	274 aa		13.8	□□□□□ -0.2
SCNM1-204	ENST00000461862	PCDHB15	Q9Y5E8	787 aa		13.8	□□□□□ -0.2
SCNM1-204	ENST00000461862	PRR36	Q9H6K5	1346 aa		13.8	□□□□□ -0.2
SCNM1-204	ENST00000461862	EDC4	Q6P2E9	1401 aa	Known RBP	13.8	□□□□□ -0.2
SCNM1-204	ENST00000461862	ANKAR	Q7Z5J8	1434 aa		13.8	□□□□□ -0.2
SCNM1-204	ENST00000461862	C1orf167	Q5SNV9	1468 aa		13.8	□□□□□ -0.2
SCNM1-204	ENST00000461862	SPTLC1	O15269	473 aa		13.79	□□□□□ -0.2
SCNM1-204	ENST00000461862	NUDT16	Q96DE0	195 aa	Known RBP	13.79	□□□□□ -0.2
SCNM1-204	ENST00000461862	ZBED9	Q6R2W3	1325 aa		13.79	□□□□□ -0.2
SCNM1-204	ENST00000461862	NRK	Q7Z2Y5	1582 aa		13.79	□□□□□ -0.2
SCNM1-204	ENST00000461862	AVP	P01185	164 aa		13.78	□□□□□ -0.2
SCNM1-204	ENST00000461862	CCNYL3	P0C7X3	344 aa		13.78	□□□□□ -0.2
SCNM1-204	ENST00000461862	MORC1	Q86VD1	984 aa		13.78	□□□□□ -0.2
SCNM1-204	ENST00000461862	CABP1	Q9NZU7	370 aa		13.78	□□□□□ -0.2
SCNM1-204	ENST00000461862	POTEC	B2RU33	542 aa		13.77	□□□□□ -0.21
SCNM1-204	ENST00000461862	POLR3A	O14802	1390 aa	Predicted RBP	13.77	□□□□□ -0.21
SCNM1-204	ENST00000461862	DCC	P43146	1447 aa		13.77	□□□□□ -0.21
SCNM1-204	ENST00000461862	BLM	P54132	1417 aa	Predicted RBP	13.77	□□□□□ -0.21
SCNM1-204	ENST00000461862	WNT7B	P56706	349 aa		13.77	□□□□□ -0.21
SCNM1-204	ENST00000461862	DIXDC1	Q155Q3	683 aa		13.77	□□□□□ -0.21
SCNM1-204	ENST00000461862	PTPRN	Q16849	979 aa		13.77	□□□□□ -0.21
SCNM1-204	ENST00000461862	TTC24	A2A3L6	582 aa	Predicted RBP	13.76	□□□□□ -0.21
SCNM1-204	ENST00000461862	XPC	Q01831	940 aa	Predicted RBP	13.76	□□□□□ -0.21
SCNM1-204	ENST00000461862	RC3H1	Q5TC82	1133 aa	Known RBP	13.76	□□□□□ -0.21
SCNM1-204	ENST00000461862	CRIPAK	Q8N1N5	446 aa		13.76	□□□□□ -0.21
SCNM1-204	ENST00000461862	SPDYE5	A6NIY4	337 aa		13.75	□□□□□ -0.21
SCNM1-204	ENST00000461862	SMPD1	P17405	629 aa		13.75	□□□□□ -0.21
SCNM1-204	ENST00000461862	SNIP1	Q8TAD8	396 aa	Known RBP	13.75	□□□□□ -0.21
SCNM1-204	ENST00000461862	RGPD8	O14715	1765 aa	Predicted RBP	13.75	□□□□□ -0.21
SCNM1-204	ENST00000461862	PLEKHG3	A1L390	1219 aa		13.74	□□□□□ -0.21
SCNM1-204	ENST00000461862	CFAP99	D6REC4	459 aa		13.74	□□□□□ -0.21
SCNM1-204	ENST00000461862	DESI1	Q6ICB0	168 aa		13.74	□□□□□ -0.21
SCNM1-204	ENST00000461862	RIC3	Q7Z5B4	369 aa		13.74	□□□□□ -0.21
SCNM1-204	ENST00000461862	SHPRH	Q149N8	1683 aa		13.74	□□□□□ -0.21
SCNM1-204	ENST00000461862		J3QL48	77 aa		13.73	□□□□□ -0.21
SCNM1-204	ENST00000461862	ESCO1	Q5FWF5	840 aa		13.73	□□□□□ -0.21
SCNM1-204	ENST00000461862	MYSM1	Q5VVJ2	828 aa		13.73	□□□□□ -0.21
SCNM1-204	ENST00000461862	LIMD1	Q9UGP4	676 aa		13.73	□□□□□ -0.21
SCNM1-204	ENST00000461862	COL16A1	Q07092	1604 aa	Predicted RBP	13.72	□□□□□ -0.21
SCNM1-204	ENST00000461862	WDR43	Q15061	677 aa	Known RBP eCLIP	13.72	□□□□□ -0.21
SCNM1-204	ENST00000461862	PMFBP1	Q8TBY8	1022 aa		13.72	□□□□□ -0.21
SCNM1-204	ENST00000461862	CABLES1	Q8TDN4	633 aa		13.72	□□□□□ -0.21
SCNM1-204	ENST00000461862	EVA1B	Q9NVM1	165 aa		13.72	□□□□□ -0.21
SCNM1-204	ENST00000461862	DACH1	Q9UI36	760 aa		13.72	□□□□□ -0.21
SCNM1-204	ENST00000461862	FYB1	O15117	783 aa		13.71	□□□□□ -0.21
SCNM1-204	ENST00000461862	UNC93B1	Q9H1C4	597 aa		13.71	□□□□□ -0.21
SCNM1-204	ENST00000461862	ZBTB3	Q9H5J0	574 aa		13.71	□□□□□ -0.21
SCNM1-204	ENST00000461862	USP6	P35125	1406 aa		13.71	□□□□□ -0.22
SCNM1-204	ENST00000461862	PHLPP1	O60346	1717 aa		13.7	□□□□□ -0.22
SCNM1-204	ENST00000461862	FOXO3	O43524	673 aa		13.7	□□□□□ -0.22
SCNM1-204	ENST00000461862	CFAP53	Q96M91	514 aa		13.7	□□□□□ -0.22
SCNM1-204	ENST00000461862	NHSL1	Q5SYE7	1610 aa		13.7	□□□□□ -0.22
SCNM1-204	ENST00000461862	AHDC1	Q5TGY3	1603 aa	Predicted RBP	13.7	□□□□□ -0.22
SCNM1-204	ENST00000461862	USP54	Q70EL1	1684 aa		13.69	□□□□□ -0.22
SCNM1-204	ENST00000461862	SH3BP2	P78314	561 aa		13.69	□□□□□ -0.22
SCNM1-204	ENST00000461862	KCNH2	Q12809	1159 aa		13.69	□□□□□ -0.22
SCNM1-204	ENST00000461862	CSPP1	Q1MSJ5	1256 aa		13.69	□□□□□ -0.22
SCNM1-204	ENST00000461862	SMCP	P49901	116 aa	Predicted RBP	13.68	□□□□□ -0.22
SCNM1-204	ENST00000461862	QPCT	Q16769	361 aa		13.68	□□□□□ -0.22
SCNM1-204	ENST00000461862	CTC1	Q2NKJ3	1217 aa		13.68	□□□□□ -0.22
SCNM1-204	ENST00000461862	PRPF38B	Q5VTL8	546 aa	Known RBP	13.68	□□□□□ -0.22
SCNM1-204	ENST00000461862	GGNBP2	Q9H3C7	697 aa		13.68	□□□□□ -0.22
SCNM1-204	ENST00000461862	PXDN	Q92626	1479 aa		13.67	□□□□□ -0.22
SCNM1-204	ENST00000461862	ACE	P12821	1306 aa		13.67	□□□□□ -0.22
SCNM1-204	ENST00000461862	MAP2	P11137	1827 aa	Known RBP	13.67	□□□□□ -0.22
SCNM1-204	ENST00000461862	SSH2	Q76I76	1423 aa		13.67	□□□□□ -0.22
SCNM1-204	ENST00000461862	SMG6	Q86US8	1419 aa	Known RBP	13.67	□□□□□ -0.22
SCNM1-204	ENST00000461862	LYPD8	Q6UX82	237 aa		13.67	□□□□□ -0.22
SCNM1-204	ENST00000461862	AATK	Q6ZMQ8	1374 aa		13.67	□□□□□ -0.22
SCNM1-204	ENST00000461862	COL3A1	P02461	1466 aa	Predicted RBP	13.67	□□□□□ -0.22
SCNM1-204	ENST00000461862	TTC21A	Q8NDW8	1320 aa		13.66	□□□□□ -0.22
SCNM1-204	ENST00000461862	AXIN1	O15169	862 aa		13.66	□□□□□ -0.22
SCNM1-204	ENST00000461862	SIAH2	O43255	324 aa		13.66	□□□□□ -0.22
SCNM1-204	ENST00000461862	KIF1A	Q12756	1690 aa		13.66	□□□□□ -0.22
SCNM1-204	ENST00000461862	OVOS2	A0A0J9YW53	1432 aa		13.65	□□□□□ -0.22
SCNM1-204	ENST00000461862	OVOS2	Q6IE36	1432 aa		13.65	□□□□□ -0.22
SCNM1-204	ENST00000461862	LRP6	O75581	1613 aa		13.65	□□□□□ -0.22
SCNM1-204	ENST00000461862	MTHFS	P49914	203 aa		13.65	□□□□□ -0.22
SCNM1-204	ENST00000461862	LINC01559	Q495D7	138 aa		13.65	□□□□□ -0.22
SCNM1-204	ENST00000461862	SUGP2	Q8IX01	1082 aa	Known RBP eCLIP	13.65	□□□□□ -0.22
SCNM1-204	ENST00000461862	NGEF	Q8N5V2	710 aa		13.65	□□□□□ -0.22
SCNM1-204	ENST00000461862	ADAMTS8	Q9UP79	889 aa		13.65	□□□□□ -0.22
SCNM1-204	ENST00000461862	SOS2	Q07890	1332 aa	Predicted RBP	13.64	□□□□□ -0.23
SCNM1-204	ENST00000461862	TTC21B	Q7Z4L5	1316 aa		13.64	□□□□□ -0.23
SCNM1-204	ENST00000461862	CDK12	Q9NYV4	1490 aa	Predicted RBP	13.64	□□□□□ -0.23
SCNM1-204	ENST00000461862	PNPLA6	Q8IY17	1366 aa		13.64	□□□□□ -0.23
SCNM1-204	ENST00000461862	TNNT2	P45379	298 aa	Predicted RBP	13.64	□□□□□ -0.23
SCNM1-204	ENST00000461862	TUSC1	Q2TAM9	212 aa		13.64	□□□□□ -0.23
SCNM1-204	ENST00000461862	BAP1	Q92560	729 aa		13.64	□□□□□ -0.23
SCNM1-204	ENST00000461862	HPS1	Q92902	700 aa		13.64	□□□□□ -0.23
SCNM1-204	ENST00000461862	ZNF775	Q96BV0	537 aa	Predicted RBP	13.64	□□□□□ -0.23
SCNM1-204	ENST00000461862	GTF3C3	Q9Y5Q9	886 aa		13.64	□□□□□ -0.23
SCNM1-204	ENST00000461862	PIK3C2A	O00443	1686 aa		13.63	□□□□□ -0.23
SCNM1-204	ENST00000461862	F12	P00748	615 aa	Predicted RBP	13.63	□□□□□ -0.23
SCNM1-204	ENST00000461862	PDE3B	Q13370	1112 aa		13.63	□□□□□ -0.23
SCNM1-204	ENST00000461862	EHBP1	Q8NDI1	1231 aa		13.63	□□□□□ -0.23

Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms