RNA–Protein interactions for RNA: ENST00000461383.1

VCL-203, Transcript of vinculin, humanhuman

TSL 2

Gene VCL, Length 268 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCL-203ENST00000461383 SERTM1A2A2V5 107 aa5.23□□□□□ -1.57
VCL-203ENST00000461383 CDK2AP1O14519 115 aa5.23□□□□□ -1.57
VCL-203ENST00000461383 RASSF7Q02833 373 aa5.23□□□□□ -1.57
VCL-203ENST00000461383 SRSF11Q05519 484 aaKnown RBP5.23□□□□□ -1.57
VCL-203ENST00000461383 CLN3Q13286 438 aa5.23□□□□□ -1.57
VCL-203ENST00000461383 MTFR1Q15390 333 aa5.23□□□□□ -1.57
VCL-203ENST00000461383 TMEM214Q6NUQ4 689 aaKnown RBP5.23□□□□□ -1.57
VCL-203ENST00000461383 DNAJC14Q6Y2X3 702 aaPredicted RBP5.23□□□□□ -1.57
VCL-203ENST00000461383 LYSMD3Q7Z3D4 306 aa5.23□□□□□ -1.57
VCL-203ENST00000461383 TMEM151AQ8N4L1 468 aa5.23□□□□□ -1.57
VCL-203ENST00000461383 TMC1Q8TDI8 760 aa5.23□□□□□ -1.57
VCL-203ENST00000461383 C2orf49Q9BVC5 232 aaPredicted RBP5.23□□□□□ -1.57
VCL-203ENST00000461383 CDC14CA4D256 554 aa5.22□□□□□ -1.57
VCL-203ENST00000461383 NDUFB5O43674 189 aa5.22□□□□□ -1.57
VCL-203ENST00000461383 MPSTP25325 297 aa5.22□□□□□ -1.57
VCL-203ENST00000461383 FOXK2Q01167 660 aa5.22□□□□□ -1.57
VCL-203ENST00000461383 GAS6Q14393 721 aa5.22□□□□□ -1.57
VCL-203ENST00000461383 ZNF326Q5BKZ1 582 aaKnown RBP5.22□□□□□ -1.57
VCL-203ENST00000461383 SLC27A3Q5K4L6 730 aa5.22□□□□□ -1.57
VCL-203ENST00000461383 ALKBH2Q6NS38 261 aa5.22□□□□□ -1.57
VCL-203ENST00000461383 STAG2Q8N3U4 1231 aa5.22□□□□□ -1.57
VCL-203ENST00000461383 SVOPQ8N4V2 548 aa5.22□□□□□ -1.57
VCL-203ENST00000461383 WHAMMQ8TF30 809 aa5.22□□□□□ -1.57
VCL-203ENST00000461383 ZSCAN10Q96SZ4 725 aaPredicted RBP5.22□□□□□ -1.57
VCL-203ENST00000461383 BRPF3Q9ULD4 1205 aa5.22□□□□□ -1.57
VCL-203ENST00000461383 RBM47A0AV96 593 aaKnown RBP5.21□□□□□ -1.58
VCL-203ENST00000461383 GDF11O95390 407 aa5.21□□□□□ -1.58
VCL-203ENST00000461383 CENPCQ03188 943 aa5.21□□□□□ -1.58
VCL-203ENST00000461383 KANK3Q6NY19 840 aa5.21□□□□□ -1.58
VCL-203ENST00000461383 ABTB2Q8N961 1025 aa5.21□□□□□ -1.58
VCL-203ENST00000461383 GIPC2Q8TF65 315 aa5.21□□□□□ -1.58
VCL-203ENST00000461383 ZNF837Q96EG3 531 aaPredicted RBP5.21□□□□□ -1.58
VCL-203ENST00000461383 SAP130Q9H0E3 1048 aa5.21□□□□□ -1.58
VCL-203ENST00000461383 CUEDC1Q9NWM3 386 aaPredicted RBP5.21□□□□□ -1.58
VCL-203ENST00000461383 STIM2Q9P246 746 aa5.21□□□□□ -1.58
VCL-203ENST00000461383 ADAMTS2O95450 1211 aa5.2□□□□□ -1.58
VCL-203ENST00000461383 BRD2P25440 801 aaKnown RBP5.2□□□□□ -1.58
VCL-203ENST00000461383 NOS2P35228 1153 aa5.2□□□□□ -1.58
VCL-203ENST00000461383 ARHGAP4P98171 946 aa5.2□□□□□ -1.58
VCL-203ENST00000461383 NOM1Q5C9Z4 860 aaKnown RBP5.2□□□□□ -1.58
VCL-203ENST00000461383 WDR44Q5JSH3 913 aa5.2□□□□□ -1.58
VCL-203ENST00000461383 GNASQ5JWF2 1037 aa5.2□□□□□ -1.58
VCL-203ENST00000461383 COX20Q5RI15 118 aa5.2□□□□□ -1.58
VCL-203ENST00000461383 TRIM22Q8IYM9 498 aa5.2□□□□□ -1.58
VCL-203ENST00000461383 L3MBTL2Q969R5 705 aa5.2□□□□□ -1.58
VCL-203ENST00000461383 ASB16Q96NS5 453 aa5.2□□□□□ -1.58
VCL-203ENST00000461383 NIFKQ9BYG3 293 aaKnown RBP5.2□□□□□ -1.58
VCL-203ENST00000461383 HCN4Q9Y3Q4 1203 aa5.2□□□□□ -1.58
VCL-203ENST00000461383 PARP3Q9Y6F1 533 aa5.2□□□□□ -1.58
VCL-203ENST00000461383 USP3Q9Y6I4 520 aa5.2□□□□□ -1.58
VCL-203ENST00000461383 SPATA31C2B4DYI2 1134 aa5.19□□□□□ -1.58
VCL-203ENST00000461383 SUZ12Q15022 739 aaKnown RBP5.19□□□□□ -1.58
VCL-203ENST00000461383 TEAD4Q15561 434 aa5.19□□□□□ -1.58
VCL-203ENST00000461383 PPARGC1BQ86YN6 1023 aaKnown RBP5.19□□□□□ -1.58
VCL-203ENST00000461383 ALDH16A1Q8IZ83 802 aa5.19□□□□□ -1.58
VCL-203ENST00000461383 RHBDD1Q8TEB9 315 aa5.19□□□□□ -1.58
VCL-203ENST00000461383 QTRT2Q9H974 415 aaKnown RBP5.19□□□□□ -1.58
VCL-203ENST00000461383 MBIPQ9NS73 344 aa5.19□□□□□ -1.58
VCL-203ENST00000461383 LRRC4BQ9NT99 713 aa5.19□□□□□ -1.58
VCL-203ENST00000461383 IQSEC3Q9UPP2 1182 aaPredicted RBP5.19□□□□□ -1.58
VCL-203ENST00000461383 DYRK1BQ9Y463 629 aa5.19□□□□□ -1.58
VCL-203ENST00000461383 EML1O00423 815 aa5.18□□□□□ -1.58
VCL-203ENST00000461383 IGHA1P01876 353 aa5.18□□□□□ -1.58
VCL-203ENST00000461383 CELA2BP08218 269 aaPredicted RBP5.18□□□□□ -1.58
VCL-203ENST00000461383 ZNF16P17020 682 aaPredicted RBP5.18□□□□□ -1.58
VCL-203ENST00000461383 NPR3P17342 541 aa5.18□□□□□ -1.58
VCL-203ENST00000461383 PLA2G4AP47712 749 aa5.18□□□□□ -1.58
VCL-203ENST00000461383 EIF1AXP47813 144 aaKnown RBP5.18□□□□□ -1.58
VCL-203ENST00000461383 DGKZQ13574 1117 aa5.18□□□□□ -1.58
VCL-203ENST00000461383 RTN1Q16799 776 aa5.18□□□□□ -1.58
VCL-203ENST00000461383 LYPD4Q6UWN0 246 aa5.18□□□□□ -1.58
VCL-203ENST00000461383 NPAS4Q8IUM7 802 aa5.18□□□□□ -1.58
VCL-203ENST00000461383 RGL4Q8IZJ4 473 aa5.18□□□□□ -1.58
VCL-203ENST00000461383 TTC16Q8NEE8 873 aa5.18□□□□□ -1.58
VCL-203ENST00000461383 AIDAQ96BJ3 306 aa5.18□□□□□ -1.58
VCL-203ENST00000461383 MRRFQ96E11 262 aaKnown RBP5.18□□□□□ -1.58
VCL-203ENST00000461383 SCARF2Q96GP6 870 aaPredicted RBP5.18□□□□□ -1.58
VCL-203ENST00000461383 PHACTR1Q9C0D0 580 aa5.18□□□□□ -1.58
VCL-203ENST00000461383 FHDC1Q9C0D6 1143 aaPredicted RBP5.18□□□□□ -1.58
VCL-203ENST00000461383 GRIP2Q9C0E4 1043 aa5.18□□□□□ -1.58
VCL-203ENST00000461383 HRH3Q9Y5N1 445 aa5.18□□□□□ -1.58
VCL-203ENST00000461383 UNCXA6NJT0 531 aa5.17□□□□□ -1.58
VCL-203ENST00000461383 HIRAP54198 1017 aaPredicted RBP5.17□□□□□ -1.58
VCL-203ENST00000461383 PDE3BQ13370 1112 aa5.17□□□□□ -1.58
VCL-203ENST00000461383 ECM1Q16610 540 aa5.17□□□□□ -1.58
VCL-203ENST00000461383 NBPF1Q3BBV0 1214 aa5.17□□□□□ -1.58
VCL-203ENST00000461383 C11orf91Q3C1V1 193 aa5.17□□□□□ -1.58
VCL-203ENST00000461383 EAPPQ56P03 285 aaPredicted RBP5.17□□□□□ -1.58
VCL-203ENST00000461383 SH3PXD2AQ5TCZ1 1133 aa5.17□□□□□ -1.58
VCL-203ENST00000461383 PRICKLE2Q7Z3G6 844 aa5.17□□□□□ -1.58
VCL-203ENST00000461383 ZDHHC1Q8WTX9 485 aa5.17□□□□□ -1.58
VCL-203ENST00000461383 MYO19Q96H55 970 aa5.17□□□□□ -1.58
VCL-203ENST00000461383 RBCK1Q9BYM8 510 aa5.17□□□□□ -1.58
VCL-203ENST00000461383 H7C1W4 665 aa5.16□□□□□ -1.58
VCL-203ENST00000461383 TNFRSF10BO14763 440 aa5.16□□□□□ -1.58
VCL-203ENST00000461383 PCSK2P16519 638 aa5.16□□□□□ -1.58
VCL-203ENST00000461383 MAP3K10Q02779 954 aa5.16□□□□□ -1.58
VCL-203ENST00000461383 HIF1AQ16665 826 aa5.16□□□□□ -1.58
VCL-203ENST00000461383 NBPF10Q6P3W6 841 aaKnown RBP5.16□□□□□ -1.58
VCL-203ENST00000461383 TMC7Q7Z402 723 aa5.16□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 55.9 ms