RNA–Protein interactions for RNA: ENST00000461171.1

CD40-203, Transcript of CD40 molecule, humanhuman

TSL 3

Gene CD40, Length 710 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD40-203ENST00000461171 H0YIN7 160 aa12.75□□□□□ -0.37
CD40-203ENST00000461171 PDZRN3Q9UPQ7 1066 aa12.75□□□□□ -0.37
CD40-203ENST00000461171 PDE6BP35913 854 aa12.74□□□□□ -0.37
CD40-203ENST00000461171 TMPOP42166 694 aaKnown RBP12.74□□□□□ -0.37
CD40-203ENST00000461171 PRELPP51888 382 aa12.74□□□□□ -0.37
CD40-203ENST00000461171 CCDC24Q8N4L8 307 aa12.74□□□□□ -0.37
CD40-203ENST00000461171 ZNF652Q9Y2D9 606 aa12.74□□□□□ -0.37
CD40-203ENST00000461171 ARFGEF2Q9Y6D5 1785 aa12.74□□□□□ -0.37
CD40-203ENST00000461171 ZC3H4Q9UPT8 1303 aaKnown RBP12.73□□□□□ -0.37
CD40-203ENST00000461171 NFKBIEO00221 500 aa12.73□□□□□ -0.37
CD40-203ENST00000461171 RIPK4P57078 832 aa12.73□□□□□ -0.37
CD40-203ENST00000461171 RASSF7Q02833 373 aa12.73□□□□□ -0.37
CD40-203ENST00000461171 PRKRIP1Q9H875 184 aaPredicted RBP12.73□□□□□ -0.37
CD40-203ENST00000461171 RNF181Q9P0P0 153 aa12.73□□□□□ -0.37
CD40-203ENST00000461171 FER1L6Q2WGJ9 1857 aa12.72□□□□□ -0.37
CD40-203ENST00000461171 ERBB4Q15303 1308 aa12.72□□□□□ -0.37
CD40-203ENST00000461171 KLRG2A4D1S0 409 aaPredicted RBP12.72□□□□□ -0.37
CD40-203ENST00000461171 SRGNP10124 158 aa12.72□□□□□ -0.37
CD40-203ENST00000461171 ST5P78524 1137 aa12.72□□□□□ -0.37
CD40-203ENST00000461171 LMOD3Q0VAK6 560 aa12.72□□□□□ -0.37
CD40-203ENST00000461171 NBPF5PQ86XG9 351 aaPredicted RBP12.72□□□□□ -0.37
CD40-203ENST00000461171 NMRK2Q9NPI5 230 aa12.72□□□□□ -0.37
CD40-203ENST00000461171 BABAM1Q9NWV8 329 aa12.72□□□□□ -0.37
CD40-203ENST00000461171 TIAM2Q8IVF5 1701 aa12.71□□□□□ -0.37
CD40-203ENST00000461171 TNRC6CQ9HCJ0 1690 aaKnown RBP12.71□□□□□ -0.37
CD40-203ENST00000461171 LMNB1P20700 586 aa12.71□□□□□ -0.37
CD40-203ENST00000461171 HLFQ16534 295 aa12.71□□□□□ -0.37
CD40-203ENST00000461171 STYK1Q6J9G0 422 aa12.71□□□□□ -0.37
CD40-203ENST00000461171 LRP10Q7Z4F1 713 aa12.71□□□□□ -0.37
CD40-203ENST00000461171 TSPYL4Q9UJ04 414 aa12.71□□□□□ -0.37
CD40-203ENST00000461171 NIP7Q9Y221 180 aaKnown RBP eCLIP12.71□□□□□ -0.37
CD40-203ENST00000461171 SLX4Q8IY92 1834 aa12.71□□□□□ -0.38
CD40-203ENST00000461171 MAP3K15Q6ZN16 1313 aa12.7□□□□□ -0.38
CD40-203ENST00000461171 NUP98P52948 1817 aa12.7□□□□□ -0.38
CD40-203ENST00000461171 ERVV-1B6SEH8 477 aa12.7□□□□□ -0.38
CD40-203ENST00000461171 TTLL7Q6ZT98 887 aa12.7□□□□□ -0.38
CD40-203ENST00000461171 CCDC146Q8IYE0 955 aa12.7□□□□□ -0.38
CD40-203ENST00000461171 RRP7AQ9Y3A4 280 aaKnown RBP12.7□□□□□ -0.38
CD40-203ENST00000461171 RIC1Q4ADV7 1423 aa12.7□□□□□ -0.38
CD40-203ENST00000461171 IBTKQ9P2D0 1353 aaPredicted RBP12.69□□□□□ -0.38
CD40-203ENST00000461171 LTBP3Q9NS15 1303 aa12.69□□□□□ -0.38
CD40-203ENST00000461171 PRPF40BQ6NWY9 871 aaKnown RBP12.69□□□□□ -0.38
CD40-203ENST00000461171 CNKSR1Q969H4 720 aa12.69□□□□□ -0.38
CD40-203ENST00000461171 ZNF622Q969S3 477 aaKnown RBP eCLIP12.69□□□□□ -0.38
CD40-203ENST00000461171 RUNDC1Q96C34 613 aa12.69□□□□□ -0.38
CD40-203ENST00000461171 ADAMTS8Q9UP79 889 aa12.69□□□□□ -0.38
CD40-203ENST00000461171 TRIM35Q9UPQ4 493 aa12.69□□□□□ -0.38
CD40-203ENST00000461171 ABCC12Q96J65 1359 aa12.69□□□□□ -0.38
CD40-203ENST00000461171 KDM2BQ8NHM5 1336 aa12.68□□□□□ -0.38
CD40-203ENST00000461171 CACNA1SQ13698 1873 aa12.68□□□□□ -0.38
CD40-203ENST00000461171 CHL1O00533 1208 aa12.68□□□□□ -0.38
CD40-203ENST00000461171 NPHP1O15259 732 aa12.68□□□□□ -0.38
CD40-203ENST00000461171 C21orf2O43822 256 aa12.68□□□□□ -0.38
CD40-203ENST00000461171 TOMM70O94826 608 aa12.68□□□□□ -0.38
CD40-203ENST00000461171 HSPA6P17066 643 aa12.68□□□□□ -0.38
CD40-203ENST00000461171 WDR43Q15061 677 aaKnown RBP eCLIP12.68□□□□□ -0.38
CD40-203ENST00000461171 PDIA6Q15084 440 aa12.68□□□□□ -0.38
CD40-203ENST00000461171 NCBP3Q53F19 620 aaKnown RBP12.68□□□□□ -0.38
CD40-203ENST00000461171 TPTE2Q6XPS3 522 aa12.68□□□□□ -0.38
CD40-203ENST00000461171 MASTLQ96GX5 879 aa12.68□□□□□ -0.38
CD40-203ENST00000461171 CCDC88AQ3V6T2 1871 aa12.68□□□□□ -0.38
CD40-203ENST00000461171 UBN2Q6ZU65 1347 aa12.67□□□□□ -0.38
CD40-203ENST00000461171 DICER1Q9UPY3 1922 aaKnown RBP12.67□□□□□ -0.38
CD40-203ENST00000461171 MYL6BP14649 208 aa12.67□□□□□ -0.38
CD40-203ENST00000461171 NPR1P16066 1061 aa12.67□□□□□ -0.38
CD40-203ENST00000461171 PROSER3Q2NL68 480 aa12.67□□□□□ -0.38
CD40-203ENST00000461171 KIF6Q6ZMV9 814 aa12.67□□□□□ -0.38
CD40-203ENST00000461171 C7orf43Q8WVR3 580 aa12.67□□□□□ -0.38
CD40-203ENST00000461171 SNED1Q8TER0 1413 aa12.66□□□□□ -0.38
CD40-203ENST00000461171 CRY2Q49AN0 593 aa12.66□□□□□ -0.38
CD40-203ENST00000461171 ZNF34Q8IZ26 560 aa12.66□□□□□ -0.38
CD40-203ENST00000461171 NGEFQ8N5V2 710 aa12.66□□□□□ -0.38
CD40-203ENST00000461171 TAOK3Q9H2K8 898 aa12.66□□□□□ -0.38
CD40-203ENST00000461171 ZBTB3Q9H5J0 574 aa12.66□□□□□ -0.38
CD40-203ENST00000461171 FAM177BA6PVY3 158 aa12.65□□□□□ -0.38
CD40-203ENST00000461171 DSG3P32926 999 aa12.65□□□□□ -0.38
CD40-203ENST00000461171 NEUROD2Q15784 382 aa12.65□□□□□ -0.38
CD40-203ENST00000461171 SOGA3Q5TF21 947 aa12.65□□□□□ -0.38
CD40-203ENST00000461171 GIGYF2Q6Y7W6 1299 aaKnown RBP12.65□□□□□ -0.38
CD40-203ENST00000461171 RBM46Q8TBY0 533 aaKnown RBP12.65□□□□□ -0.38
CD40-203ENST00000461171 ZNF219Q9P2Y4 722 aaPredicted RBP12.65□□□□□ -0.38
CD40-203ENST00000461171 ANKRD36CQ5JPF3 1778 aa12.64□□□□□ -0.39
CD40-203ENST00000461171 GLTPD2A6NH11 291 aa12.64□□□□□ -0.39
CD40-203ENST00000461171 NTSR2O95665 410 aa12.64□□□□□ -0.39
CD40-203ENST00000461171 ANXA1P04083 346 aa12.64□□□□□ -0.39
CD40-203ENST00000461171 EIF2S2P20042 333 aaKnown RBP12.64□□□□□ -0.39
CD40-203ENST00000461171 GPTP24298 496 aa12.64□□□□□ -0.39
CD40-203ENST00000461171 KRT24Q2M2I5 525 aa12.64□□□□□ -0.39
CD40-203ENST00000461171 NUTM1Q86Y26 1132 aa12.64□□□□□ -0.39
CD40-203ENST00000461171 NYXQ9GZU5 481 aa12.64□□□□□ -0.39
CD40-203ENST00000461171 WDR90Q96KV7 1748 aa12.64□□□□□ -0.39
CD40-203ENST00000461171 HOXB7P09629 217 aa12.63□□□□□ -0.39
CD40-203ENST00000461171 ERFEQ4G0M1 354 aa12.63□□□□□ -0.39
CD40-203ENST00000461171 CCDC93Q567U6 631 aa12.63□□□□□ -0.39
CD40-203ENST00000461171 SUSD4Q5VX71 490 aa12.63□□□□□ -0.39
CD40-203ENST00000461171 CFAP44Q96MT7 982 aa12.63□□□□□ -0.39
CD40-203ENST00000461171 RRAGCQ9HB90 399 aa12.63□□□□□ -0.39
CD40-203ENST00000461171 ZNF853P0CG23 659 aa12.62□□□□□ -0.39
CD40-203ENST00000461171 HOXA10P31260 410 aaPredicted RBP12.62□□□□□ -0.39
CD40-203ENST00000461171 PARP10Q53GL7 1025 aa12.62□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 87.3 ms