RNA–Protein interactions for RNA: ENST00000460822.1

HPS3-203, Transcript of HPS3, biogenesis of lysosomal organelles complex 2 subunit 1, humanhuman

TSL 2

Gene HPS3, Length 1,958 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS3-203ENST00000460822 GALNT6Q8NCL4 622 aa4.96□□□□□ -1.61
HPS3-203ENST00000460822 SCHIP1Q9P0W5 487 aaPredicted RBP4.96□□□□□ -1.61
HPS3-203ENST00000460822 PCDHGC4Q9Y5F7 938 aa4.96□□□□□ -1.61
HPS3-203ENST00000460822 ZBTB7BO15156 539 aaPredicted RBP4.96□□□□□ -1.62
HPS3-203ENST00000460822 ATXN7O15265 892 aaPredicted RBP4.96□□□□□ -1.62
HPS3-203ENST00000460822 ATG7O95352 703 aa4.96□□□□□ -1.62
HPS3-203ENST00000460822 FGFR3P22607 806 aa4.96□□□□□ -1.62
HPS3-203ENST00000460822 PODNQ7Z5L7 613 aa4.96□□□□□ -1.62
HPS3-203ENST00000460822 ABHD17AQ96GS6 310 aa4.96□□□□□ -1.62
HPS3-203ENST00000460822 ZNF594Q96JF6 807 aaPredicted RBP4.96□□□□□ -1.62
HPS3-203ENST00000460822 VRTNQ9H8Y1 702 aa4.96□□□□□ -1.62
HPS3-203ENST00000460822 PARP3Q9Y6F1 533 aa4.96□□□□□ -1.62
HPS3-203ENST00000460822 SERTM1A2A2V5 107 aa4.95□□□□□ -1.62
HPS3-203ENST00000460822 NOS2P35228 1153 aa4.95□□□□□ -1.62
HPS3-203ENST00000460822 CLDN10P78369 228 aa4.95□□□□□ -1.62
HPS3-203ENST00000460822 TEAD4Q15561 434 aa4.95□□□□□ -1.62
HPS3-203ENST00000460822 L3MBTL2Q969R5 705 aa4.95□□□□□ -1.62
HPS3-203ENST00000460822 OXCT2Q9BYC2 517 aaPredicted RBP4.95□□□□□ -1.62
HPS3-203ENST00000460822 ZCCHC2Q9C0B9 1178 aaKnown RBP4.95□□□□□ -1.62
HPS3-203ENST00000460822 LRRC4BQ9NT99 713 aa4.95□□□□□ -1.62
HPS3-203ENST00000460822 GDF2Q9UK05 429 aaPredicted RBP4.95□□□□□ -1.62
HPS3-203ENST00000460822 IQSEC3Q9UPP2 1182 aaPredicted RBP4.95□□□□□ -1.62
HPS3-203ENST00000460822 M0R2N6 131 aa4.95□□□□□ -1.62
HPS3-203ENST00000460822 KHNYNO15037 678 aaKnown RBP4.95□□□□□ -1.62
HPS3-203ENST00000460822 BNIP3LO60238 219 aa4.95□□□□□ -1.62
HPS3-203ENST00000460822 BAG6P46379 1132 aa4.95□□□□□ -1.62
HPS3-203ENST00000460822 CCDC27Q2M243 656 aa4.95□□□□□ -1.62
HPS3-203ENST00000460822 TBCELQ5QJ74 424 aa4.95□□□□□ -1.62
HPS3-203ENST00000460822 ACDQ96AP0 544 aa4.95□□□□□ -1.62
HPS3-203ENST00000460822 KLRG1Q96E93 195 aa4.95□□□□□ -1.62
HPS3-203ENST00000460822 USP3Q9Y6I4 520 aa4.95□□□□□ -1.62
HPS3-203ENST00000460822 THBS1P07996 1170 aa4.94□□□□□ -1.62
HPS3-203ENST00000460822 ATP4AP20648 1035 aa4.94□□□□□ -1.62
HPS3-203ENST00000460822 SEC13P55735 322 aa4.94□□□□□ -1.62
HPS3-203ENST00000460822 PSMA6P60900 246 aaKnown RBP4.94□□□□□ -1.62
HPS3-203ENST00000460822 GOLGA6L1Q8N7Z2 621 aa4.94□□□□□ -1.62
HPS3-203ENST00000460822 ZIC5Q96T25 663 aa4.94□□□□□ -1.62
HPS3-203ENST00000460822 KIAA1024Q9UPX6 916 aa4.94□□□□□ -1.62
HPS3-203ENST00000460822 SFI1A8K8P3 1242 aa4.93□□□□□ -1.62
HPS3-203ENST00000460822 TXLNAP40222 546 aa4.93□□□□□ -1.62
HPS3-203ENST00000460822 SND1Q7KZF4 910 aaKnown RBP eCLIP4.93□□□□□ -1.62
HPS3-203ENST00000460822 SIX5Q8N196 739 aa4.93□□□□□ -1.62
HPS3-203ENST00000460822 RHPN1Q8TCX5 695 aa4.93□□□□□ -1.62
HPS3-203ENST00000460822 HINFPQ9BQA5 517 aa4.93□□□□□ -1.62
HPS3-203ENST00000460822 DCDC2BA2VCK2 349 aa4.93□□□□□ -1.62
HPS3-203ENST00000460822 OIP5O43482 229 aa4.93□□□□□ -1.62
HPS3-203ENST00000460822 PPP1R12BO60237 982 aaPredicted RBP4.93□□□□□ -1.62
HPS3-203ENST00000460822 AMPD1P23109 780 aa4.93□□□□□ -1.62
HPS3-203ENST00000460822 CTBSQ01459 385 aa4.93□□□□□ -1.62
HPS3-203ENST00000460822 UBAP2LQ14157 1087 aaKnown RBP4.93□□□□□ -1.62
HPS3-203ENST00000460822 ALYREFQ86V81 257 aaKnown RBP4.93□□□□□ -1.62
HPS3-203ENST00000460822 PRR12Q9ULL5 1215 aa4.93□□□□□ -1.62
HPS3-203ENST00000460822 MAPTP10636 758 aaKnown RBP4.92□□□□□ -1.62
HPS3-203ENST00000460822 EPHA4P54764 986 aa4.92□□□□□ -1.62
HPS3-203ENST00000460822 KANK4Q5T7N3 995 aaPredicted RBP4.92□□□□□ -1.62
HPS3-203ENST00000460822 TSEN2Q8NCE0 465 aaKnown RBP4.92□□□□□ -1.62
HPS3-203ENST00000460822 ZDHHC1Q8WTX9 485 aa4.92□□□□□ -1.62
HPS3-203ENST00000460822 STK32AQ8WU08 396 aa4.92□□□□□ -1.62
HPS3-203ENST00000460822 TSPAN10Q9H1Z9 355 aaPredicted RBP4.92□□□□□ -1.62
HPS3-203ENST00000460822 RRAGCQ9HB90 399 aa4.92□□□□□ -1.62
HPS3-203ENST00000460822 NDFIP2Q9NV92 336 aa4.92□□□□□ -1.62
HPS3-203ENST00000460822 ANKIB1Q9P2G1 1089 aa4.92□□□□□ -1.62
HPS3-203ENST00000460822 HCN4Q9Y3Q4 1203 aa4.92□□□□□ -1.62
HPS3-203ENST00000460822 GPC6Q9Y625 555 aaPredicted RBP4.92□□□□□ -1.62
HPS3-203ENST00000460822 TNP2Q05952 138 aa4.91□□□□□ -1.62
HPS3-203ENST00000460822 TMEM164Q5U3C3 297 aa4.91□□□□□ -1.62
HPS3-203ENST00000460822 LRRC69Q6ZNQ3 347 aa4.91□□□□□ -1.62
HPS3-203ENST00000460822 ZNF295-AS1Q8N0V1 137 aa4.91□□□□□ -1.62
HPS3-203ENST00000460822 GAS2L2Q8NHY3 880 aa4.91□□□□□ -1.62
HPS3-203ENST00000460822 CHMP7Q8WUX9 453 aaPredicted RBP4.91□□□□□ -1.62
HPS3-203ENST00000460822 EDARADDQ8WWZ3 215 aa4.91□□□□□ -1.62
HPS3-203ENST00000460822 ZMIZ1Q9ULJ6 1067 aa4.91□□□□□ -1.62
HPS3-203ENST00000460822 ATAD2Q6PL18 1390 aa4.91□□□□□ -1.62
HPS3-203ENST00000460822 FAM157BP0CG42 384 aa4.91□□□□□ -1.62
HPS3-203ENST00000460822 CD33P20138 364 aa4.91□□□□□ -1.62
HPS3-203ENST00000460822 C1orf53Q5VUE5 145 aa4.91□□□□□ -1.62
HPS3-203ENST00000460822 SCG3Q8WXD2 468 aaKnown RBP4.91□□□□□ -1.62
HPS3-203ENST00000460822 MARK1Q9P0L2 795 aa4.91□□□□□ -1.62
HPS3-203ENST00000460822 GGA1Q9UJY5 639 aa4.91□□□□□ -1.62
HPS3-203ENST00000460822 KRBA1A5PL33 1030 aa4.9□□□□□ -1.63
HPS3-203ENST00000460822 USP17L15C9J2P7 530 aa4.9□□□□□ -1.63
HPS3-203ENST00000460822 USP17L10C9JJH3 530 aa4.9□□□□□ -1.63
HPS3-203ENST00000460822 USP17L13C9JLJ4 530 aa4.9□□□□□ -1.63
HPS3-203ENST00000460822 USP17L12C9JPN9 530 aa4.9□□□□□ -1.63
HPS3-203ENST00000460822 USP17L11C9JVI0 530 aa4.9□□□□□ -1.63
HPS3-203ENST00000460822 USP17L21D6R901 530 aa4.9□□□□□ -1.63
HPS3-203ENST00000460822 USP17L18D6R9N7 530 aa4.9□□□□□ -1.63
HPS3-203ENST00000460822 USP17L22D6RA61 530 aa4.9□□□□□ -1.63
HPS3-203ENST00000460822 USP17L17D6RBQ6 530 aa4.9□□□□□ -1.63
HPS3-203ENST00000460822 USP17L19D6RCP7 530 aa4.9□□□□□ -1.63
HPS3-203ENST00000460822 USP17L20D6RJB6 530 aa4.9□□□□□ -1.63
HPS3-203ENST00000460822 EML1O00423 815 aa4.9□□□□□ -1.63
HPS3-203ENST00000460822 ARAFP10398 606 aa4.9□□□□□ -1.63
HPS3-203ENST00000460822 USP17L24Q0WX57 530 aa4.9□□□□□ -1.63
HPS3-203ENST00000460822 DPYDQ12882 1025 aa4.9□□□□□ -1.63
HPS3-203ENST00000460822 LAMC2Q13753 1193 aa4.9□□□□□ -1.63
HPS3-203ENST00000460822 ELOAQ14241 798 aaKnown RBP4.9□□□□□ -1.63
HPS3-203ENST00000460822 HIF1AQ16665 826 aa4.9□□□□□ -1.63
HPS3-203ENST00000460822 FAM182BQ5T319 152 aa4.9□□□□□ -1.63
HPS3-203ENST00000460822 SAMD5Q5TGI4 173 aa4.9□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 10.2 ms