RNA–Protein interactions for RNA: ENST00000460791.1

NXF3-203, Transcript of nuclear RNA export factor 3, humanhuman

TSL 2

Gene NXF3, Length 592 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NXF3-203ENST00000460791 BCL2L12Q9HB09 334 aa7.6□□□□□ -1.19
NXF3-203ENST00000460791 CHPF2Q9P2E5 772 aa7.6□□□□□ -1.19
NXF3-203ENST00000460791 PPP1R1BQ9UD71 204 aaPredicted RBP7.6□□□□□ -1.19
NXF3-203ENST00000460791 NARFQ9UHQ1 456 aa7.6□□□□□ -1.19
NXF3-203ENST00000460791 FAM177BA6PVY3 158 aa7.59□□□□□ -1.19
NXF3-203ENST00000460791 VAMP4O75379 141 aa7.59□□□□□ -1.19
NXF3-203ENST00000460791 CAMTA2O94983 1202 aa7.59□□□□□ -1.19
NXF3-203ENST00000460791 MMP10P09238 476 aa7.59□□□□□ -1.19
NXF3-203ENST00000460791 HLFQ16534 295 aa7.59□□□□□ -1.19
NXF3-203ENST00000460791 COPS6Q7L5N1 327 aa7.59□□□□□ -1.19
NXF3-203ENST00000460791 CCDC24Q8N4L8 307 aa7.59□□□□□ -1.19
NXF3-203ENST00000460791 XAGE3Q8WTP9 111 aa7.59□□□□□ -1.19
NXF3-203ENST00000460791 ZBTB3Q9H5J0 574 aa7.59□□□□□ -1.19
NXF3-203ENST00000460791 PHAXQ9H814 394 aaKnown RBP7.59□□□□□ -1.19
NXF3-203ENST00000460791 DDX21Q9NR30 783 aaKnown RBP eCLIP7.59□□□□□ -1.19
NXF3-203ENST00000460791 COL24A1Q17RW2 1714 aa7.58□□□□□ -1.2
NXF3-203ENST00000460791 USP42Q9H9J4 1324 aaKnown RBP7.58□□□□□ -1.2
NXF3-203ENST00000460791 E9PSI1 815 aa7.58□□□□□ -1.2
NXF3-203ENST00000460791 POLD1P28340 1107 aa7.58□□□□□ -1.2
NXF3-203ENST00000460791 TBC1D9BQ66K14 1250 aa7.58□□□□□ -1.2
NXF3-203ENST00000460791 G2E3Q7L622 706 aa7.58□□□□□ -1.2
NXF3-203ENST00000460791 SGIP1Q9BQI5 828 aa7.58□□□□□ -1.2
NXF3-203ENST00000460791 BCORQ6W2J9 1755 aa7.58□□□□□ -1.2
NXF3-203ENST00000460791 N4BP2Q86UW6 1770 aaPredicted RBP7.57□□□□□ -1.2
NXF3-203ENST00000460791 GPTP24298 496 aa7.57□□□□□ -1.2
NXF3-203ENST00000460791 TM4SF1P30408 202 aa7.57□□□□□ -1.2
NXF3-203ENST00000460791 DDR1Q08345 913 aa7.57□□□□□ -1.2
NXF3-203ENST00000460791 NFIXQ14938 502 aa7.57□□□□□ -1.2
NXF3-203ENST00000460791 CCDC30Q5VVM6 783 aa7.57□□□□□ -1.2
NXF3-203ENST00000460791 KIF6Q6ZMV9 814 aa7.57□□□□□ -1.2
NXF3-203ENST00000460791 LRP10Q7Z4F1 713 aa7.57□□□□□ -1.2
NXF3-203ENST00000460791 NLGN1Q8N2Q7 840 aa7.57□□□□□ -1.2
NXF3-203ENST00000460791 DBF4Q9UBU7 674 aaPredicted RBP7.57□□□□□ -1.2
NXF3-203ENST00000460791 WWC3Q9ULE0 1092 aa7.57□□□□□ -1.2
NXF3-203ENST00000460791 PARP3Q9Y6F1 533 aa7.57□□□□□ -1.2
NXF3-203ENST00000460791 U3KPZ7 1027 aaPredicted RBP7.57□□□□□ -1.2
NXF3-203ENST00000460791 CACNA1SQ13698 1873 aa7.57□□□□□ -1.2
NXF3-203ENST00000460791 MAP3K15Q6ZN16 1313 aa7.56□□□□□ -1.2
NXF3-203ENST00000460791 TAF1P21675 1872 aa7.56□□□□□ -1.2
NXF3-203ENST00000460791 SERPINB2P05120 415 aa7.56□□□□□ -1.2
NXF3-203ENST00000460791 HOXB7P09629 217 aa7.56□□□□□ -1.2
NXF3-203ENST00000460791 TRMT2AQ8IZ69 625 aaKnown RBP7.56□□□□□ -1.2
NXF3-203ENST00000460791 BCL2L13Q9BXK5 485 aa7.56□□□□□ -1.2
NXF3-203ENST00000460791 STK31Q9BXU1 1019 aa7.56□□□□□ -1.2
NXF3-203ENST00000460791 FHDC1Q9C0D6 1143 aaPredicted RBP7.56□□□□□ -1.2
NXF3-203ENST00000460791 HYPKQ9NX55 129 aa7.56□□□□□ -1.2
NXF3-203ENST00000460791 SCN7AQ01118 1682 aa7.56□□□□□ -1.2
NXF3-203ENST00000460791 ANKRD36CQ5JPF3 1778 aa7.56□□□□□ -1.2
NXF3-203ENST00000460791 ARFGEF2Q9Y6D5 1785 aa7.56□□□□□ -1.2
NXF3-203ENST00000460791 LRP5O75197 1615 aa7.56□□□□□ -1.2
NXF3-203ENST00000460791 ERBB4Q15303 1308 aa7.55□□□□□ -1.2
NXF3-203ENST00000460791 ATP5J2-PTCD1G3V325 749 aa7.55□□□□□ -1.2
NXF3-203ENST00000460791 POLRMTO00411 1230 aaKnown RBP7.55□□□□□ -1.2
NXF3-203ENST00000460791 ANKRD13DQ6ZTN6 518 aa7.55□□□□□ -1.2
NXF3-203ENST00000460791 JARID2Q92833 1246 aaPredicted RBP7.55□□□□□ -1.2
NXF3-203ENST00000460791 SETDB2Q96T68 719 aa7.55□□□□□ -1.2
NXF3-203ENST00000460791 NIP7Q9Y221 180 aaKnown RBP eCLIP7.55□□□□□ -1.2
NXF3-203ENST00000460791 ANKRD31Q8N7Z5 1873 aa7.55□□□□□ -1.2
NXF3-203ENST00000460791 ZBED9Q6R2W3 1325 aa7.54□□□□□ -1.2
NXF3-203ENST00000460791 CCDC88AQ3V6T2 1871 aa7.54□□□□□ -1.2
NXF3-203ENST00000460791 ERVV-1B6SEH8 477 aa7.54□□□□□ -1.2
NXF3-203ENST00000460791 NPHP1O15259 732 aa7.54□□□□□ -1.2
NXF3-203ENST00000460791 GIGYF2Q6Y7W6 1299 aaKnown RBP7.54□□□□□ -1.2
NXF3-203ENST00000460791 RIC3Q7Z5B4 369 aa7.54□□□□□ -1.2
NXF3-203ENST00000460791 PELP1Q8IZL8 1130 aaKnown RBP7.54□□□□□ -1.2
NXF3-203ENST00000460791 SYNE4Q8N205 404 aa7.54□□□□□ -1.2
NXF3-203ENST00000460791 NLGN2Q8NFZ4 835 aa7.54□□□□□ -1.2
NXF3-203ENST00000460791 SSH1Q8WYL5 1049 aa7.54□□□□□ -1.2
NXF3-203ENST00000460791 SYT17Q9BSW7 474 aa7.54□□□□□ -1.2
NXF3-203ENST00000460791 ZNF652Q9Y2D9 606 aa7.54□□□□□ -1.2
NXF3-203ENST00000460791 KIF13BQ9NQT8 1826 aa7.53□□□□□ -1.2
NXF3-203ENST00000460791 A0A0G2JLW4 131 aa7.53□□□□□ -1.2
NXF3-203ENST00000460791 PI4KAP2A4QPH2 592 aa7.53□□□□□ -1.2
NXF3-203ENST00000460791 F6X3S4 739 aa7.53□□□□□ -1.2
NXF3-203ENST00000460791 FLIIQ13045 1269 aa7.53□□□□□ -1.2
NXF3-203ENST00000460791 FKBP5Q13451 457 aaPredicted RBP7.53□□□□□ -1.2
NXF3-203ENST00000460791 TCIRG1Q13488 830 aa7.53□□□□□ -1.2
NXF3-203ENST00000460791 RTL5Q5HYW3 569 aaPredicted RBP7.53□□□□□ -1.2
NXF3-203ENST00000460791 SUSD4Q5VX71 490 aa7.53□□□□□ -1.2
NXF3-203ENST00000460791 CLEC4GQ6UXB4 293 aa7.53□□□□□ -1.2
NXF3-203ENST00000460791 NBPF5PQ86XG9 351 aaPredicted RBP7.53□□□□□ -1.2
NXF3-203ENST00000460791 NUTM1Q86Y26 1132 aa7.53□□□□□ -1.2
NXF3-203ENST00000460791 MRPL50Q8N5N7 158 aaKnown RBP7.53□□□□□ -1.2
NXF3-203ENST00000460791 PI4KAP1Q8N8J0 262 aa7.53□□□□□ -1.2
NXF3-203ENST00000460791 PLBD2Q8NHP8 589 aa7.53□□□□□ -1.2
NXF3-203ENST00000460791 MYD88Q99836 296 aa7.53□□□□□ -1.2
NXF3-203ENST00000460791 MAP3K2Q9Y2U5 619 aa7.53□□□□□ -1.2
NXF3-203ENST00000460791 UBN2Q6ZU65 1347 aa7.52□□□□□ -1.2
NXF3-203ENST00000460791 CARMIL3Q8ND23 1372 aa7.52□□□□□ -1.21
NXF3-203ENST00000460791 DPEP1P16444 411 aa7.52□□□□□ -1.21
NXF3-203ENST00000460791 GTF2E1P29083 439 aaPredicted RBP7.52□□□□□ -1.21
NXF3-203ENST00000460791 CHRNA5P30532 468 aa7.52□□□□□ -1.21
NXF3-203ENST00000460791 ERFEQ4G0M1 354 aa7.52□□□□□ -1.21
NXF3-203ENST00000460791 PRR5LQ6MZQ0 368 aa7.52□□□□□ -1.21
NXF3-203ENST00000460791 KSR2Q6VAB6 950 aa7.52□□□□□ -1.21
NXF3-203ENST00000460791 ZNF34Q8IZ26 560 aa7.52□□□□□ -1.21
NXF3-203ENST00000460791 CHMP4AQ9BY43 222 aa7.52□□□□□ -1.21
NXF3-203ENST00000460791 SMC4Q9NTJ3 1288 aa7.52□□□□□ -1.21
NXF3-203ENST00000460791 NRXN2Q9P2S2 1712 aa7.52□□□□□ -1.21
NXF3-203ENST00000460791 LAMB2P55268 1798 aa7.51□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 11.8 ms