RNA–Protein interactions for RNA: ENST00000460509.1

VBP1-202, Transcript of VHL binding protein 1, humanhuman

TSL 2

Gene VBP1, Length 586 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VBP1-202ENST00000460509 POTEAQ6S8J7 498 aa8.45□□□□□ -1.06
VBP1-202ENST00000460509 DYRK1BQ9Y463 629 aa8.45□□□□□ -1.06
VBP1-202ENST00000460509 TERTO14746 1132 aaKnown RBP8.44□□□□□ -1.06
VBP1-202ENST00000460509 F11P03951 625 aa8.44□□□□□ -1.06
VBP1-202ENST00000460509 ATP4AP20648 1035 aa8.44□□□□□ -1.06
VBP1-202ENST00000460509 C11orf91Q3C1V1 193 aa8.44□□□□□ -1.06
VBP1-202ENST00000460509 HELQQ8TDG4 1101 aa8.44□□□□□ -1.06
VBP1-202ENST00000460509 PODXL2Q9NZ53 605 aa8.44□□□□□ -1.06
VBP1-202ENST00000460509 SENP3-EIF4A1A0A087X0R7 540 aa8.43□□□□□ -1.06
VBP1-202ENST00000460509 SOWAHDA6NJG2 315 aa8.43□□□□□ -1.06
VBP1-202ENST00000460509 ICMTO60725 284 aa8.43□□□□□ -1.06
VBP1-202ENST00000460509 LRRC69Q6ZNQ3 347 aa8.43□□□□□ -1.06
VBP1-202ENST00000460509 IFT43Q96FT9 208 aa8.43□□□□□ -1.06
VBP1-202ENST00000460509 MYO19Q96H55 970 aa8.43□□□□□ -1.06
VBP1-202ENST00000460509 HSH2DQ96JZ2 352 aa8.43□□□□□ -1.06
VBP1-202ENST00000460509 STIM2Q9P246 746 aa8.43□□□□□ -1.06
VBP1-202ENST00000460509 A0A1W2PNR3 127 aa8.42□□□□□ -1.06
VBP1-202ENST00000460509 MPSTP25325 297 aa8.42□□□□□ -1.06
VBP1-202ENST00000460509 BRD2P25440 801 aaKnown RBP8.42□□□□□ -1.06
VBP1-202ENST00000460509 SF3B2Q13435 895 aaKnown RBP8.42□□□□□ -1.06
VBP1-202ENST00000460509 CCDC155Q8N6L0 562 aa8.42□□□□□ -1.06
VBP1-202ENST00000460509 KLRG1Q96E93 195 aa8.42□□□□□ -1.06
VBP1-202ENST00000460509 ZIC5Q96T25 663 aa8.42□□□□□ -1.06
VBP1-202ENST00000460509 EGFL7Q9UHF1 273 aa8.42□□□□□ -1.06
VBP1-202ENST00000460509 SLC35F4A4IF30 521 aa8.41□□□□□ -1.06
VBP1-202ENST00000460509 TMCO4Q5TGY1 634 aa8.41□□□□□ -1.06
VBP1-202ENST00000460509 ZNF280CQ8ND82 737 aa8.41□□□□□ -1.06
VBP1-202ENST00000460509 SUSD3Q96L08 255 aa8.41□□□□□ -1.06
VBP1-202ENST00000460509 ANKIB1Q9P2G1 1089 aa8.41□□□□□ -1.06
VBP1-202ENST00000460509 TNFRSF10BO14763 440 aa8.4□□□□□ -1.06
VBP1-202ENST00000460509 FAM13AO94988 1023 aa8.4□□□□□ -1.06
VBP1-202ENST00000460509 HIF1AQ16665 826 aa8.4□□□□□ -1.06
VBP1-202ENST00000460509 EFHC2Q5JST6 749 aa8.4□□□□□ -1.06
VBP1-202ENST00000460509 SND1Q7KZF4 910 aaKnown RBP eCLIP8.4□□□□□ -1.06
VBP1-202ENST00000460509 WIPF1O43516 503 aa8.39□□□□□ -1.07
VBP1-202ENST00000460509 NOM1Q5C9Z4 860 aaKnown RBP8.39□□□□□ -1.07
VBP1-202ENST00000460509 TREML1Q86YW5 311 aa8.39□□□□□ -1.07
VBP1-202ENST00000460509 ABTB2Q8N961 1025 aa8.39□□□□□ -1.07
VBP1-202ENST00000460509 C7orf43Q8WVR3 580 aa8.39□□□□□ -1.07
VBP1-202ENST00000460509 CDC14CA4D256 554 aa8.38□□□□□ -1.07
VBP1-202ENST00000460509 EIF1AXP47813 144 aaKnown RBP8.38□□□□□ -1.07
VBP1-202ENST00000460509 ETFBKMTQ8IXQ9 262 aa8.38□□□□□ -1.07
VBP1-202ENST00000460509 NUCKS1Q9H1E3 243 aaKnown RBP8.38□□□□□ -1.07
VBP1-202ENST00000460509 CRISPLD1Q9H336 500 aa8.38□□□□□ -1.07
VBP1-202ENST00000460509 BCS1LQ9Y276 419 aa8.38□□□□□ -1.07
VBP1-202ENST00000460509 H7C1W4 665 aa8.37□□□□□ -1.07
VBP1-202ENST00000460509 ZBTB39O15060 712 aa8.37□□□□□ -1.07
VBP1-202ENST00000460509 ITGA6P23229 1130 aa8.37□□□□□ -1.07
VBP1-202ENST00000460509 VEGFBP49765 207 aa8.37□□□□□ -1.07
VBP1-202ENST00000460509 FAM26DQ5JW98 314 aa8.37□□□□□ -1.07
VBP1-202ENST00000460509 ATCAYQ86WG3 371 aa8.37□□□□□ -1.07
VBP1-202ENST00000460509 CEP63Q96MT8 703 aa8.37□□□□□ -1.07
VBP1-202ENST00000460509 CUEDC1Q9NWM3 386 aaPredicted RBP8.37□□□□□ -1.07
VBP1-202ENST00000460509 GPC6Q9Y625 555 aaPredicted RBP8.37□□□□□ -1.07
VBP1-202ENST00000460509 TGFBR3LH3BV60 316 aa8.36□□□□□ -1.07
VBP1-202ENST00000460509 MICAL2O94851 1124 aa8.36□□□□□ -1.07
VBP1-202ENST00000460509 ZAP70P43403 619 aa8.36□□□□□ -1.07
VBP1-202ENST00000460509 DBN1Q16643 649 aa8.36□□□□□ -1.07
VBP1-202ENST00000460509 CCDC27Q2M243 656 aa8.36□□□□□ -1.07
VBP1-202ENST00000460509 ALKBH2Q6NS38 261 aa8.36□□□□□ -1.07
VBP1-202ENST00000460509 PPFIA3O75145 1194 aa8.35□□□□□ -1.07
VBP1-202ENST00000460509 IDH3AP50213 366 aa8.35□□□□□ -1.07
VBP1-202ENST00000460509 DNM1Q05193 864 aaKnown RBP8.35□□□□□ -1.07
VBP1-202ENST00000460509 BTLAQ7Z6A9 289 aa8.35□□□□□ -1.07
VBP1-202ENST00000460509 NLRP8Q86W28 1048 aa8.35□□□□□ -1.07
VBP1-202ENST00000460509 TRIM22Q8IYM9 498 aa8.35□□□□□ -1.07
VBP1-202ENST00000460509 ZCCHC2Q9C0B9 1178 aaKnown RBP8.35□□□□□ -1.07
VBP1-202ENST00000460509 NXF1Q9UBU9 619 aaKnown RBP8.35□□□□□ -1.07
VBP1-202ENST00000460509 LOC100996750A0A140TA64 210 aa8.34□□□□□ -1.07
VBP1-202ENST00000460509 DCDC2BA2VCK2 349 aa8.34□□□□□ -1.07
VBP1-202ENST00000460509 KHNYNO15037 678 aaKnown RBP8.34□□□□□ -1.07
VBP1-202ENST00000460509 ATXN7O15265 892 aaPredicted RBP8.34□□□□□ -1.07
VBP1-202ENST00000460509 INSM1Q01101 510 aaPredicted RBP8.34□□□□□ -1.07
VBP1-202ENST00000460509 FIGNL1Q6PIW4 674 aa8.34□□□□□ -1.07
VBP1-202ENST00000460509 RGL4Q8IZJ4 473 aa8.34□□□□□ -1.07
VBP1-202ENST00000460509 TMC1Q8TDI8 760 aa8.34□□□□□ -1.07
VBP1-202ENST00000460509 GPR152Q8TDT2 470 aa8.34□□□□□ -1.07
VBP1-202ENST00000460509 GTPBP3Q969Y2 492 aaKnown RBP8.34□□□□□ -1.07
VBP1-202ENST00000460509 KRTAP4-6Q9BYQ5 205 aa8.34□□□□□ -1.07
VBP1-202ENST00000460509 BRPF3Q9ULD4 1205 aa8.34□□□□□ -1.07
VBP1-202ENST00000460509 USP20Q9Y2K6 914 aa8.34□□□□□ -1.07
VBP1-202ENST00000460509 NPR3P17342 541 aa8.33□□□□□ -1.08
VBP1-202ENST00000460509 MAPK1P28482 360 aa8.33□□□□□ -1.08
VBP1-202ENST00000460509 MARSP56192 900 aaKnown RBP8.33□□□□□ -1.08
VBP1-202ENST00000460509 ARHGAP4P98171 946 aa8.33□□□□□ -1.08
VBP1-202ENST00000460509 ECM1Q16610 540 aa8.33□□□□□ -1.08
VBP1-202ENST00000460509 CMTR1Q8N1G2 835 aaKnown RBP8.33□□□□□ -1.08
VBP1-202ENST00000460509 VWA5B2Q8N398 1253 aa8.33□□□□□ -1.08
VBP1-202ENST00000460509 EDEM1Q92611 657 aa8.33□□□□□ -1.08
VBP1-202ENST00000460509 CCDC87Q9NVE4 849 aa8.33□□□□□ -1.08
VBP1-202ENST00000460509 CCDC9Q9Y3X0 531 aaKnown RBP8.33□□□□□ -1.08
VBP1-202ENST00000460509 GPR25O00155 361 aa8.32□□□□□ -1.08
VBP1-202ENST00000460509 NDUFB5O43674 189 aa8.32□□□□□ -1.08
VBP1-202ENST00000460509 ARSDP51689 593 aa8.32□□□□□ -1.08
VBP1-202ENST00000460509 MFAP1P55081 439 aaKnown RBP8.32□□□□□ -1.08
VBP1-202ENST00000460509 LBRQ14739 615 aaKnown RBP8.32□□□□□ -1.08
VBP1-202ENST00000460509 IER5Q5VY09 327 aa8.32□□□□□ -1.08
VBP1-202ENST00000460509 FOXR1Q6PIV2 292 aa8.32□□□□□ -1.08
VBP1-202ENST00000460509 TTC16Q8NEE8 873 aa8.32□□□□□ -1.08
VBP1-202ENST00000460509 SLC16A10Q8TF71 515 aa8.32□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 72.2 ms