RNA–Protein interactions for RNA: ENST00000460097.5

CMTM3-203, Transcript of CKLF like MARVEL transmembrane domain containing 3, humanhuman

TSL 2 BASIC

Gene CMTM3, Length 1,797 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3-203ENST00000460097 TAF1LQ8IZX4 1826 aa19.5■□□□□ 0.71
CMTM3-203ENST00000460097 ESPNB1AK53 854 aa19.49■□□□□ 0.71
CMTM3-203ENST00000460097 STARD3NLO95772 234 aa19.49■□□□□ 0.71
CMTM3-203ENST00000460097 CYP19A1P11511 503 aaPredicted RBP19.49■□□□□ 0.71
CMTM3-203ENST00000460097 NAP1L5Q96NT1 182 aaPredicted RBP19.49■□□□□ 0.71
CMTM3-203ENST00000460097 TPM2P07951 284 aa19.49■□□□□ 0.71
CMTM3-203ENST00000460097 DZIP1LQ8IYY4 767 aaKnown RBP19.49■□□□□ 0.71
CMTM3-203ENST00000460097 PANK2Q9BZ23 570 aa19.49■□□□□ 0.71
CMTM3-203ENST00000460097 IL16Q14005 1332 aa19.49■□□□□ 0.71
CMTM3-203ENST00000460097 CRKLP46109 303 aaKnown RBP19.48■□□□□ 0.71
CMTM3-203ENST00000460097 HSP90AA2PQ14568 343 aaPredicted RBP19.48■□□□□ 0.71
CMTM3-203ENST00000460097 MBIPQ9NS73 344 aa19.48■□□□□ 0.71
CMTM3-203ENST00000460097 DDX19BQ9UMR2 479 aa19.48■□□□□ 0.71
CMTM3-203ENST00000460097 CNTNAP4Q9C0A0 1308 aa19.48■□□□□ 0.71
CMTM3-203ENST00000460097 IBTKQ9P2D0 1353 aaPredicted RBP19.48■□□□□ 0.71
CMTM3-203ENST00000460097 C4BP0C0L5 1744 aa19.47■□□□□ 0.71
CMTM3-203ENST00000460097 GIGYF1O75420 1035 aaPredicted RBP19.47■□□□□ 0.71
CMTM3-203ENST00000460097 GBP4Q96PP9 640 aa19.47■□□□□ 0.71
CMTM3-203ENST00000460097 USP16Q9Y5T5 823 aa19.47■□□□□ 0.71
CMTM3-203ENST00000460097 KDM3BQ7LBC6 1761 aa19.47■□□□□ 0.71
CMTM3-203ENST00000460097 KIF16BQ96L93 1317 aa19.47■□□□□ 0.71
CMTM3-203ENST00000460097 PRAMEF22A3QJZ6 481 aa19.47■□□□□ 0.71
CMTM3-203ENST00000460097 GNPATO15228 680 aa19.47■□□□□ 0.71
CMTM3-203ENST00000460097 INTS5Q6P9B9 1019 aaKnown RBP19.46■□□□□ 0.71
CMTM3-203ENST00000460097 CLEC17AQ6ZS10 378 aa19.46■□□□□ 0.71
CMTM3-203ENST00000460097 RTCBQ9Y3I0 505 aaKnown RBP19.46■□□□□ 0.71
CMTM3-203ENST00000460097 TJP1Q07157 1748 aa19.45■□□□□ 0.7
CMTM3-203ENST00000460097 FLAD1Q8NFF5 587 aa19.45■□□□□ 0.7
CMTM3-203ENST00000460097 CCDC87Q9NVE4 849 aa19.45■□□□□ 0.7
CMTM3-203ENST00000460097 RPS6KA4O75676 772 aa19.44■□□□□ 0.7
CMTM3-203ENST00000460097 CICQ96RK0 1608 aaPredicted RBP19.44■□□□□ 0.7
CMTM3-203ENST00000460097 SSFA2P28290 1259 aa19.44■□□□□ 0.7
CMTM3-203ENST00000460097 TERF1P54274 439 aa19.44■□□□□ 0.7
CMTM3-203ENST00000460097 RAB3GAP1Q15042 981 aa19.44■□□□□ 0.7
CMTM3-203ENST00000460097 FTSJ3Q8IY81 847 aaKnown RBP19.44■□□□□ 0.7
CMTM3-203ENST00000460097 COL5A3P25940 1745 aaPredicted RBP19.44■□□□□ 0.7
CMTM3-203ENST00000460097 PNPLA7Q6ZV29 1317 aa19.44■□□□□ 0.7
CMTM3-203ENST00000460097 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP19.43■□□□□ 0.7
CMTM3-203ENST00000460097 PHF14O94880 888 aa19.43■□□□□ 0.7
CMTM3-203ENST00000460097 AMIGO3Q86WK7 504 aa19.43■□□□□ 0.7
CMTM3-203ENST00000460097 A1BGP04217 495 aa19.42■□□□□ 0.7
CMTM3-203ENST00000460097 KRT24Q2M2I5 525 aa19.42■□□□□ 0.7
CMTM3-203ENST00000460097 TRAPPC3LQ5T215 181 aa19.42■□□□□ 0.7
CMTM3-203ENST00000460097 SMIM5Q71RC9 77 aa19.42■□□□□ 0.7
CMTM3-203ENST00000460097 COL23A1Q86Y22 540 aaPredicted RBP19.42■□□□□ 0.7
CMTM3-203ENST00000460097 TSR2Q969E8 191 aaKnown RBP19.42■□□□□ 0.7
CMTM3-203ENST00000460097 PDGFDQ9GZP0 370 aaPredicted RBP19.42■□□□□ 0.7
CMTM3-203ENST00000460097 ZBTB1Q9Y2K1 713 aa19.42■□□□□ 0.7
CMTM3-203ENST00000460097 MFAP1P55081 439 aaKnown RBP19.42■□□□□ 0.7
CMTM3-203ENST00000460097 MYH14Q7Z406 1995 aaKnown RBP19.41■□□□□ 0.7
CMTM3-203ENST00000460097 PPP1R9BQ96SB3 815 aa19.41■□□□□ 0.7
CMTM3-203ENST00000460097 TNNQ9UQP3 1299 aa19.41■□□□□ 0.7
CMTM3-203ENST00000460097 ADRA2BP18089 450 aa19.4■□□□□ 0.7
CMTM3-203ENST00000460097 TRIM44Q96DX7 344 aaPredicted RBP19.4■□□□□ 0.7
CMTM3-203ENST00000460097 PKNOX2Q96KN3 472 aa19.4■□□□□ 0.7
CMTM3-203ENST00000460097 GZF1Q9H116 711 aaPredicted RBP19.4■□□□□ 0.7
CMTM3-203ENST00000460097 EIF2S2P20042 333 aaKnown RBP19.39■□□□□ 0.7
CMTM3-203ENST00000460097 NUCB1Q02818 461 aa19.39■□□□□ 0.7
CMTM3-203ENST00000460097 CCDC173Q0VFZ6 552 aa19.39■□□□□ 0.7
CMTM3-203ENST00000460097 ARHGEF1Q92888 912 aaKnown RBP19.39■□□□□ 0.7
CMTM3-203ENST00000460097 HOXB7P09629 217 aa19.39■□□□□ 0.69
CMTM3-203ENST00000460097 ATF7IPQ6VMQ6 1270 aa19.39■□□□□ 0.69
CMTM3-203ENST00000460097 SLC16A10Q8TF71 515 aa19.39■□□□□ 0.69
CMTM3-203ENST00000460097 TNPO1Q92973 898 aaKnown RBP19.39■□□□□ 0.69
CMTM3-203ENST00000460097 UBR3Q6ZT12 1888 aa19.38■□□□□ 0.69
CMTM3-203ENST00000460097 SOS1Q07889 1333 aaPredicted RBP19.38■□□□□ 0.69
CMTM3-203ENST00000460097 ELL2O00472 640 aaPredicted RBP19.38■□□□□ 0.69
CMTM3-203ENST00000460097 RFC4P35249 363 aa19.38■□□□□ 0.69
CMTM3-203ENST00000460097 IL6STP40189 918 aaPredicted RBP19.38■□□□□ 0.69
CMTM3-203ENST00000460097 BRPF1P55201 1214 aaPredicted RBP19.38■□□□□ 0.69
CMTM3-203ENST00000460097 BMP2KLQ5H9B9 411 aa19.38■□□□□ 0.69
CMTM3-203ENST00000460097 C8orf58Q8NAV2 365 aa19.38■□□□□ 0.69
CMTM3-203ENST00000460097 ZBTB40Q9NUA8 1239 aa19.38■□□□□ 0.69
CMTM3-203ENST00000460097 EIF5P55010 431 aaKnown RBP19.37■□□□□ 0.69
CMTM3-203ENST00000460097 ZNF428Q96B54 188 aa19.37■□□□□ 0.69
CMTM3-203ENST00000460097 QSER1Q2KHR3 1735 aa19.37■□□□□ 0.69
CMTM3-203ENST00000460097 TUBGCP6Q96RT7 1819 aa19.37■□□□□ 0.69
CMTM3-203ENST00000460097 TRIM27P14373 513 aa19.37■□□□□ 0.69
CMTM3-203ENST00000460097 PIP4K2AP48426 406 aaPredicted RBP19.37■□□□□ 0.69
CMTM3-203ENST00000460097 HS1BP3Q53T59 392 aa19.37■□□□□ 0.69
CMTM3-203ENST00000460097 CHMP4BQ9H444 224 aaKnown RBP19.37■□□□□ 0.69
CMTM3-203ENST00000460097 ZNF330Q9Y3S2 320 aaPredicted RBP19.37■□□□□ 0.69
CMTM3-203ENST00000460097 NBPF26B4DH59 902 aa19.36■□□□□ 0.69
CMTM3-203ENST00000460097 IPO8O15397 1037 aaKnown RBP19.36■□□□□ 0.69
CMTM3-203ENST00000460097 ZBTB7AO95365 584 aa19.36■□□□□ 0.69
CMTM3-203ENST00000460097 NBPF10Q6P3W6 841 aaKnown RBP19.36■□□□□ 0.69
CMTM3-203ENST00000460097 NBPF15Q8N660 670 aa19.36■□□□□ 0.69
CMTM3-203ENST00000460097 NECTIN2Q92692 538 aa19.36■□□□□ 0.69
CMTM3-203ENST00000460097 A0A087WZG4 1122 aa19.35■□□□□ 0.69
CMTM3-203ENST00000460097 HDGFL1Q5TGJ6 251 aa19.35■□□□□ 0.69
CMTM3-203ENST00000460097 TSPYL6Q8N831 410 aa19.35■□□□□ 0.69
CMTM3-203ENST00000460097 ERBB4Q15303 1308 aa19.35■□□□□ 0.69
CMTM3-203ENST00000460097 ALDH1L2Q3SY69 923 aa19.34■□□□□ 0.69
CMTM3-203ENST00000460097 CHMP4AQ9BY43 222 aa19.34■□□□□ 0.69
CMTM3-203ENST00000460097 MTFR1LQ9H019 292 aa19.34■□□□□ 0.69
CMTM3-203ENST00000460097 PDCL3Q9H2J4 239 aa19.34■□□□□ 0.69
CMTM3-203ENST00000460097 COL15A1P39059 1388 aa19.34■□□□□ 0.69
CMTM3-203ENST00000460097 EXOSC9Q06265 439 aaKnown RBP19.34■□□□□ 0.69
CMTM3-203ENST00000460097 TWISTNBQ3B726 338 aaPredicted RBP19.34■□□□□ 0.69
CMTM3-203ENST00000460097 BCL2L13Q9BXK5 485 aa19.34■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 61.2 ms