RNA–Protein interactions for RNA: ENST00000460064.1

CCDC50-203, Transcript of coiled-coil domain containing 50, humanhuman

TSL 2

Gene CCDC50, Length 420 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC50-203ENST00000460064 RBM47A0AV96 593 aaKnown RBP9.23□□□□□ -0.93
CCDC50-203ENST00000460064 FZD6O60353 706 aa9.23□□□□□ -0.93
CCDC50-203ENST00000460064 DGAT1O75907 488 aa9.23□□□□□ -0.93
CCDC50-203ENST00000460064 BMP1P13497 986 aa9.23□□□□□ -0.93
CCDC50-203ENST00000460064 RHOQP17081 205 aa9.23□□□□□ -0.93
CCDC50-203ENST00000460064 BICDL1Q6ZP65 573 aa9.23□□□□□ -0.93
CCDC50-203ENST00000460064 RBCK1Q9BYM8 510 aa9.23□□□□□ -0.93
CCDC50-203ENST00000460064 E9PSI1 815 aa9.22□□□□□ -0.93
CCDC50-203ENST00000460064 CTC1Q2NKJ3 1217 aa9.22□□□□□ -0.93
CCDC50-203ENST00000460064 WDR44Q5JSH3 913 aa9.22□□□□□ -0.93
CCDC50-203ENST00000460064 NPAS4Q8IUM7 802 aa9.22□□□□□ -0.93
CCDC50-203ENST00000460064 C7orf43Q8WVR3 580 aa9.22□□□□□ -0.93
CCDC50-203ENST00000460064 CITED4Q96RK1 184 aa9.22□□□□□ -0.93
CCDC50-203ENST00000460064 NEUROD4Q9HD90 331 aa9.22□□□□□ -0.93
CCDC50-203ENST00000460064 TIMMDC1Q9NPL8 285 aa9.22□□□□□ -0.93
CCDC50-203ENST00000460064 AXIN1O15169 862 aa9.21□□□□□ -0.94
CCDC50-203ENST00000460064 ZAP70P43403 619 aa9.21□□□□□ -0.94
CCDC50-203ENST00000460064 DNM1Q05193 864 aaKnown RBP9.21□□□□□ -0.94
CCDC50-203ENST00000460064 HIF1AQ16665 826 aa9.21□□□□□ -0.94
CCDC50-203ENST00000460064 TMC7Q7Z402 723 aa9.21□□□□□ -0.94
CCDC50-203ENST00000460064 TRIM46Q7Z4K8 759 aa9.21□□□□□ -0.94
CCDC50-203ENST00000460064 TREML1Q86YW5 311 aa9.21□□□□□ -0.94
CCDC50-203ENST00000460064 RGL4Q8IZJ4 473 aa9.21□□□□□ -0.94
CCDC50-203ENST00000460064 ZFP42Q96MM3 310 aa9.21□□□□□ -0.94
CCDC50-203ENST00000460064 SMCPP49901 116 aaPredicted RBP9.2□□□□□ -0.94
CCDC50-203ENST00000460064 ARSJQ5FYB0 599 aaPredicted RBP9.2□□□□□ -0.94
CCDC50-203ENST00000460064 SUSD3Q96L08 255 aa9.2□□□□□ -0.94
CCDC50-203ENST00000460064 ANKIB1Q9P2G1 1089 aa9.2□□□□□ -0.94
CCDC50-203ENST00000460064 POLIQ9UNA4 740 aa9.2□□□□□ -0.94
CCDC50-203ENST00000460064 BCS1LQ9Y276 419 aa9.2□□□□□ -0.94
CCDC50-203ENST00000460064 SOS2Q07890 1332 aaPredicted RBP9.2□□□□□ -0.94
CCDC50-203ENST00000460064 MICAL2O94851 1124 aa9.19□□□□□ -0.94
CCDC50-203ENST00000460064 MZF1P28698 734 aaPredicted RBP9.19□□□□□ -0.94
CCDC50-203ENST00000460064 ZNF326Q5BKZ1 582 aaKnown RBP9.19□□□□□ -0.94
CCDC50-203ENST00000460064 GIPC2Q8TF65 315 aa9.19□□□□□ -0.94
CCDC50-203ENST00000460064 EDEM1Q92611 657 aa9.19□□□□□ -0.94
CCDC50-203ENST00000460064 A0A1B0GTH6 734 aa9.18□□□□□ -0.94
CCDC50-203ENST00000460064 NRG2O14511 850 aaPredicted RBP9.18□□□□□ -0.94
CCDC50-203ENST00000460064 ZNF16P17020 682 aaPredicted RBP9.18□□□□□ -0.94
CCDC50-203ENST00000460064 MSX1P28360 303 aa9.18□□□□□ -0.94
CCDC50-203ENST00000460064 PLCB3Q01970 1234 aa9.18□□□□□ -0.94
CCDC50-203ENST00000460064 PDE3BQ13370 1112 aa9.18□□□□□ -0.94
CCDC50-203ENST00000460064 ZNF280CQ8ND82 737 aa9.18□□□□□ -0.94
CCDC50-203ENST00000460064 GPR152Q8TDT2 470 aa9.18□□□□□ -0.94
CCDC50-203ENST00000460064 ZIC5Q96T25 663 aa9.18□□□□□ -0.94
CCDC50-203ENST00000460064 PCSK2P16519 638 aa9.17□□□□□ -0.94
CCDC50-203ENST00000460064 USP5P45974 858 aa9.17□□□□□ -0.94
CCDC50-203ENST00000460064 EAPPQ56P03 285 aaPredicted RBP9.17□□□□□ -0.94
CCDC50-203ENST00000460064 TTC16Q8NEE8 873 aa9.17□□□□□ -0.94
CCDC50-203ENST00000460064 KLRG1Q96E93 195 aa9.17□□□□□ -0.94
CCDC50-203ENST00000460064 DMRTB1Q96MA1 342 aa9.17□□□□□ -0.94
CCDC50-203ENST00000460064 FAM13BQ9NYF5 915 aa9.17□□□□□ -0.94
CCDC50-203ENST00000460064 GPC6Q9Y625 555 aaPredicted RBP9.17□□□□□ -0.94
CCDC50-203ENST00000460064 UNCXA6NJT0 531 aa9.16□□□□□ -0.94
CCDC50-203ENST00000460064 TGFBR3LH3BV60 316 aa9.16□□□□□ -0.94
CCDC50-203ENST00000460064 PDGFAP04085 211 aa9.16□□□□□ -0.94
CCDC50-203ENST00000460064 ATP4AP20648 1035 aa9.16□□□□□ -0.94
CCDC50-203ENST00000460064 COL19A1Q14993 1142 aa9.16□□□□□ -0.94
CCDC50-203ENST00000460064 LRRC69Q6ZNQ3 347 aa9.16□□□□□ -0.94
CCDC50-203ENST00000460064 HSH2DQ96JZ2 352 aa9.16□□□□□ -0.94
CCDC50-203ENST00000460064 FBXO33Q7Z6M2 555 aa9.15□□□□□ -0.94
CCDC50-203ENST00000460064 CRIPAKQ8N1N5 446 aa9.15□□□□□ -0.94
CCDC50-203ENST00000460064 PIK3R5Q8WYR1 880 aa9.15□□□□□ -0.94
CCDC50-203ENST00000460064 GAS2L1Q99501 681 aaPredicted RBP9.15□□□□□ -0.94
CCDC50-203ENST00000460064 GPAMQ9HCL2 828 aa9.15□□□□□ -0.94
CCDC50-203ENST00000460064 GJA3Q9Y6H8 435 aa9.15□□□□□ -0.94
CCDC50-203ENST00000460064 A0A1W2PNR3 127 aa9.14□□□□□ -0.95
CCDC50-203ENST00000460064 OPLAHO14841 1288 aa9.14□□□□□ -0.95
CCDC50-203ENST00000460064 TREHO43280 583 aa9.14□□□□□ -0.95
CCDC50-203ENST00000460064 IDH3AP50213 366 aa9.14□□□□□ -0.95
CCDC50-203ENST00000460064 TAGLNQ01995 201 aaKnown RBP9.14□□□□□ -0.95
CCDC50-203ENST00000460064 ZNF800Q2TB10 664 aaPredicted RBP eCLIP9.14□□□□□ -0.951e-7■□□□□ 9.2
CCDC50-203ENST00000460064 C8orf34Q49A92 452 aa9.14□□□□□ -0.95
CCDC50-203ENST00000460064 NUDT16Q96DE0 195 aaKnown RBP9.14□□□□□ -0.95
CCDC50-203ENST00000460064 FAM129BQ96TA1 746 aa9.14□□□□□ -0.95
CCDC50-203ENST00000460064 NIF3L1Q9GZT8 377 aa9.14□□□□□ -0.95
CCDC50-203ENST00000460064 DMGDHQ9UI17 866 aaKnown RBP9.14□□□□□ -0.95
CCDC50-203ENST00000460064 DNMT3LQ9UJW3 386 aa9.14□□□□□ -0.95
CCDC50-203ENST00000460064 MAN1A2O60476 641 aa9.13□□□□□ -0.95
CCDC50-203ENST00000460064 F11P03951 625 aa9.13□□□□□ -0.95
CCDC50-203ENST00000460064 P4HBP07237 508 aaKnown RBP9.13□□□□□ -0.95
CCDC50-203ENST00000460064 MAPK8P45983 427 aa9.13□□□□□ -0.95
CCDC50-203ENST00000460064 EHHADHQ08426 723 aa9.13□□□□□ -0.95
CCDC50-203ENST00000460064 DSC3Q14574 896 aa9.13□□□□□ -0.95
CCDC50-203ENST00000460064 IER5Q5VY09 327 aa9.13□□□□□ -0.95
CCDC50-203ENST00000460064 BTLAQ7Z6A9 289 aa9.13□□□□□ -0.95
CCDC50-203ENST00000460064 PGBD3Q8N328 593 aa9.13□□□□□ -0.95
CCDC50-203ENST00000460064 MRRFQ96E11 262 aaKnown RBP9.13□□□□□ -0.95
CCDC50-203ENST00000460064 DYRK1BQ9Y463 629 aa9.13□□□□□ -0.95
CCDC50-203ENST00000460064 RPLP1P05386 114 aaKnown RBP9.12□□□□□ -0.95
CCDC50-203ENST00000460064 LAPTM4AQ15012 233 aa9.12□□□□□ -0.95
CCDC50-203ENST00000460064 GJD3Q8N144 294 aa9.12□□□□□ -0.95
CCDC50-203ENST00000460064 GGNBP2Q9H3C7 697 aa9.12□□□□□ -0.95
CCDC50-203ENST00000460064 RUBCNLQ9H714 662 aa9.12□□□□□ -0.95
CCDC50-203ENST00000460064 ATP13A2Q9NQ11 1180 aa9.12□□□□□ -0.95
CCDC50-203ENST00000460064 AAASQ9NRG9 546 aa9.12□□□□□ -0.95
CCDC50-203ENST00000460064 GPR182O15218 404 aa9.11□□□□□ -0.95
CCDC50-203ENST00000460064 ST8SIA5O15466 376 aa9.11□□□□□ -0.95
CCDC50-203ENST00000460064 IGHA2P01877 340 aa9.11□□□□□ -0.95
CCDC50-203ENST00000460064 ARSDP51689 593 aa9.11□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms