RNA–Protein interactions for RNA: ENST00000460002.1

PCOLCE-202, Transcript of procollagen C-endopeptidase enhancer, humanhuman

TSL 3

Gene PCOLCE, Length 447 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCOLCE-202ENST00000460002 ZNF277Q9NRM2 450 aaPredicted RBP18.89■□□□□ 0.61
PCOLCE-202ENST00000460002 ST20-MTHFSA0A0A6YYL1 179 aa18.88■□□□□ 0.61
PCOLCE-202ENST00000460002 MTHFSP49914 203 aa18.88■□□□□ 0.61
PCOLCE-202ENST00000460002 TBC1D9BQ66K14 1250 aa18.88■□□□□ 0.61
PCOLCE-202ENST00000460002 CIAPIN1Q6FI81 312 aa18.88■□□□□ 0.61
PCOLCE-202ENST00000460002 STYK1Q6J9G0 422 aa18.88■□□□□ 0.61
PCOLCE-202ENST00000460002 FZD9O00144 591 aa18.87■□□□□ 0.61
PCOLCE-202ENST00000460002 SRGNP10124 158 aa18.87■□□□□ 0.61
PCOLCE-202ENST00000460002 SAPCD2Q86UD0 394 aa18.87■□□□□ 0.61
PCOLCE-202ENST00000460002 FKBP4Q02790 459 aaKnown RBP eCLIP18.86■□□□□ 0.61
PCOLCE-202ENST00000460002 EIF4A2Q14240 407 aaKnown RBP18.86■□□□□ 0.61
PCOLCE-202ENST00000460002 PLEKHO1Q53GL0 409 aaPredicted RBP18.86■□□□□ 0.61
PCOLCE-202ENST00000460002 CCDC93Q567U6 631 aa18.86■□□□□ 0.61
PCOLCE-202ENST00000460002 HABP4Q5JVS0 413 aaKnown RBP18.86■□□□□ 0.61
PCOLCE-202ENST00000460002 GPC2Q8N158 579 aa18.86■□□□□ 0.61
PCOLCE-202ENST00000460002 GCC1Q96CN9 775 aa18.86■□□□□ 0.61
PCOLCE-202ENST00000460002 CACNA1SQ13698 1873 aa18.84■□□□□ 0.61
PCOLCE-202ENST00000460002 MASTLQ96GX5 879 aa18.84■□□□□ 0.61
PCOLCE-202ENST00000460002 ZIC5Q96T25 663 aa18.84■□□□□ 0.61
PCOLCE-202ENST00000460002 ARFGEF2Q9Y6D5 1785 aa18.83■□□□□ 0.61
PCOLCE-202ENST00000460002 NEUROD1Q13562 356 aa18.83■□□□□ 0.6
PCOLCE-202ENST00000460002 OLFM4Q6UX06 510 aa18.83■□□□□ 0.6
PCOLCE-202ENST00000460002 TRPM7Q96QT4 1865 aa18.83■□□□□ 0.6
PCOLCE-202ENST00000460002 EPS15P42566 896 aa18.82■□□□□ 0.6
PCOLCE-202ENST00000460002 HHIPL1Q96JK4 782 aa18.82■□□□□ 0.6
PCOLCE-202ENST00000460002 POLKQ9UBT6 870 aa18.82■□□□□ 0.6
PCOLCE-202ENST00000460002 CANXP27824 592 aaKnown RBP18.81■□□□□ 0.6
PCOLCE-202ENST00000460002 NBPF15Q8N660 670 aa18.81■□□□□ 0.6
PCOLCE-202ENST00000460002 CELF2O95319 508 aaKnown RBP18.8■□□□□ 0.6
PCOLCE-202ENST00000460002 IARSP41252 1262 aaKnown RBP18.8■□□□□ 0.6
PCOLCE-202ENST00000460002 SCNN1DP51172 638 aa18.8■□□□□ 0.6
PCOLCE-202ENST00000460002 AMOTQ4VCS5 1084 aa18.8■□□□□ 0.6
PCOLCE-202ENST00000460002 C1orf141Q5JVX7 400 aa18.8■□□□□ 0.6
PCOLCE-202ENST00000460002 CARD14Q9BXL6 1004 aa18.8■□□□□ 0.6
PCOLCE-202ENST00000460002 GJA3Q9Y6H8 435 aa18.8■□□□□ 0.6
PCOLCE-202ENST00000460002 LMOD1P29536 600 aaPredicted RBP18.79■□□□□ 0.6
PCOLCE-202ENST00000460002 EIF5P55010 431 aaKnown RBP18.79■□□□□ 0.6
PCOLCE-202ENST00000460002 CNBD1Q8NA66 436 aa18.79■□□□□ 0.6
PCOLCE-202ENST00000460002 SLC39A6Q13433 755 aa18.78■□□□□ 0.6
PCOLCE-202ENST00000460002 USP50Q70EL3 339 aaPredicted RBP18.77■□□□□ 0.6
PCOLCE-202ENST00000460002 SYNE4Q8N205 404 aa18.77■□□□□ 0.6
PCOLCE-202ENST00000460002 COL4A5P29400 1685 aa18.76■□□□□ 0.59
PCOLCE-202ENST00000460002 NOGQ13253 232 aa18.76■□□□□ 0.59
PCOLCE-202ENST00000460002 RTKN2Q8IZC4 609 aa18.76■□□□□ 0.59
PCOLCE-202ENST00000460002 SCN7AQ01118 1682 aa18.76■□□□□ 0.59
PCOLCE-202ENST00000460002 NPHP1O15259 732 aa18.75■□□□□ 0.59
PCOLCE-202ENST00000460002 ST5P78524 1137 aa18.75■□□□□ 0.59
PCOLCE-202ENST00000460002 A0A087WZG4 1122 aa18.74■□□□□ 0.59
PCOLCE-202ENST00000460002 FXR1P51114 621 aaKnown RBP eCLIP18.74■□□□□ 0.59
PCOLCE-202ENST00000460002 SLC52A2Q9HAB3 445 aa18.74■□□□□ 0.59
PCOLCE-202ENST00000460002 SAGE1Q9NXZ1 904 aa18.74■□□□□ 0.59
PCOLCE-202ENST00000460002 TBC1D2BQ9UPU7 963 aa18.74■□□□□ 0.59
PCOLCE-202ENST00000460002 HPS5Q9UPZ3 1129 aa18.74■□□□□ 0.59
PCOLCE-202ENST00000460002 BCORQ6W2J9 1755 aa18.73■□□□□ 0.59
PCOLCE-202ENST00000460002 NPR1P16066 1061 aa18.73■□□□□ 0.59
PCOLCE-202ENST00000460002 EIF6P56537 245 aaKnown RBP18.73■□□□□ 0.59
PCOLCE-202ENST00000460002 CTU1Q7Z7A3 348 aaKnown RBP18.73■□□□□ 0.59
PCOLCE-202ENST00000460002 AEBP1Q8IUX7 1158 aa18.73■□□□□ 0.59
PCOLCE-202ENST00000460002 JDP2Q8WYK2 163 aa18.73■□□□□ 0.59
PCOLCE-202ENST00000460002 SETDB2Q96T68 719 aa18.73■□□□□ 0.59
PCOLCE-202ENST00000460002 GLIS2Q9BZE0 524 aaPredicted RBP18.73■□□□□ 0.59
PCOLCE-202ENST00000460002 SLC24A1O60721 1099 aa18.72■□□□□ 0.59
PCOLCE-202ENST00000460002 VSIG10Q8N0Z9 540 aa18.72■□□□□ 0.59
PCOLCE-202ENST00000460002 ZNF408Q9H9D4 720 aa18.72■□□□□ 0.59
PCOLCE-202ENST00000460002 SCN11AQ9UI33 1791 aa18.72■□□□□ 0.59
PCOLCE-202ENST00000460002 SNED1Q8TER0 1413 aa18.72■□□□□ 0.59
PCOLCE-202ENST00000460002 LGR6Q9HBX8 967 aa18.71■□□□□ 0.59
PCOLCE-202ENST00000460002 RNF186Q9NXI6 227 aa18.7■□□□□ 0.58
PCOLCE-202ENST00000460002 KLRG2A4D1S0 409 aaPredicted RBP18.69■□□□□ 0.58
PCOLCE-202ENST00000460002 TRPA1O75762 1119 aa18.69■□□□□ 0.58
PCOLCE-202ENST00000460002 PSMD1Q99460 953 aa18.69■□□□□ 0.58
PCOLCE-202ENST00000460002 ZNF330Q9Y3S2 320 aaPredicted RBP18.69■□□□□ 0.58
PCOLCE-202ENST00000460002 MRC1P22897 1456 aa18.69■□□□□ 0.58
PCOLCE-202ENST00000460002 FAM155AB1AL88 458 aaPredicted RBP18.68■□□□□ 0.58
PCOLCE-202ENST00000460002 CAMTA2O94983 1202 aa18.68■□□□□ 0.58
PCOLCE-202ENST00000460002 AKAP4Q5JQC9 854 aa18.68■□□□□ 0.58
PCOLCE-202ENST00000460002 ADARB2Q9NS39 739 aaKnown RBP18.68■□□□□ 0.58
PCOLCE-202ENST00000460002 DLL1O00548 723 aa18.67■□□□□ 0.58
PCOLCE-202ENST00000460002 STARD3NLO95772 234 aa18.67■□□□□ 0.58
PCOLCE-202ENST00000460002 TNNT2P45379 298 aaPredicted RBP18.67■□□□□ 0.58
PCOLCE-202ENST00000460002 HUNKP57058 714 aa18.67■□□□□ 0.58
PCOLCE-202ENST00000460002 KIF23Q02241 960 aaPredicted RBP18.66■□□□□ 0.58
PCOLCE-202ENST00000460002 GPRC5DQ9NZD1 345 aa18.66■□□□□ 0.58
PCOLCE-202ENST00000460002 PGAP2Q9UHJ9 254 aa18.66■□□□□ 0.58
PCOLCE-202ENST00000460002 RNMTO43148 476 aaKnown RBP18.64■□□□□ 0.57
PCOLCE-202ENST00000460002 NBPF5PQ86XG9 351 aaPredicted RBP18.64■□□□□ 0.57
PCOLCE-202ENST00000460002 IL6STP40189 918 aaPredicted RBP18.63■□□□□ 0.57
PCOLCE-202ENST00000460002 RGMBQ6NW40 437 aa18.63■□□□□ 0.57
PCOLCE-202ENST00000460002 LARGE2Q8N3Y3 721 aa18.63■□□□□ 0.57
PCOLCE-202ENST00000460002 SULT6B1Q6IMI4 303 aa18.62■□□□□ 0.57
PCOLCE-202ENST00000460002 DLK2Q6UY11 383 aa18.62■□□□□ 0.57
PCOLCE-202ENST00000460002 UBR2Q8IWV8 1755 aa18.62■□□□□ 0.57
PCOLCE-202ENST00000460002 ALDH1B1P30837 517 aa18.61■□□□□ 0.57
PCOLCE-202ENST00000460002 HIRAP54198 1017 aaPredicted RBP18.61■□□□□ 0.57
PCOLCE-202ENST00000460002 PKN2Q16513 984 aaKnown RBP18.61■□□□□ 0.57
PCOLCE-202ENST00000460002 CDC37L1Q7L3B6 337 aa18.61■□□□□ 0.57
PCOLCE-202ENST00000460002 A1BGP04217 495 aa18.59■□□□□ 0.57
PCOLCE-202ENST00000460002 SLC51AQ86UW1 340 aa18.59■□□□□ 0.57
PCOLCE-202ENST00000460002 ZC3H15Q8WU90 426 aaKnown RBP18.59■□□□□ 0.57
PCOLCE-202ENST00000460002 CSRNP1Q96S65 589 aa18.59■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms