RNA–Protein interactions for RNA: ENST00000459994.2

SDF4-204, Transcript of stromal cell derived factor 4, humanhuman

TSL 5

Gene SDF4, Length 604 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF4-204ENST00000459994 C2CD5Q86YS7 1000 aa20.41■□□□□ 0.86
SDF4-204ENST00000459994 GPBP1L1Q9HC44 474 aaPredicted RBP20.41■□□□□ 0.86
SDF4-204ENST00000459994 TNRC6CQ9HCJ0 1690 aaKnown RBP20.41■□□□□ 0.86
SDF4-204ENST00000459994 TMPOP42166 694 aaKnown RBP20.4■□□□□ 0.86
SDF4-204ENST00000459994 PRELPP51888 382 aa20.4■□□□□ 0.86
SDF4-204ENST00000459994 RASSF7Q02833 373 aa20.4■□□□□ 0.86
SDF4-204ENST00000459994 HLFQ16534 295 aa20.39■□□□□ 0.85
SDF4-204ENST00000459994 DICER1Q9UPY3 1922 aaKnown RBP20.39■□□□□ 0.85
SDF4-204ENST00000459994 C9orf131Q5VYM1 1079 aa20.38■□□□□ 0.85
SDF4-204ENST00000459994 NGEFQ8N5V2 710 aa20.38■□□□□ 0.85
SDF4-204ENST00000459994 SETDB2Q96T68 719 aa20.38■□□□□ 0.85
SDF4-204ENST00000459994 NEUROD2Q15784 382 aa20.37■□□□□ 0.85
SDF4-204ENST00000459994 NCBP3Q53F19 620 aaKnown RBP20.37■□□□□ 0.85
SDF4-204ENST00000459994 SENP3-EIF4A1A0A087X0R7 540 aa20.36■□□□□ 0.85
SDF4-204ENST00000459994 APAF1O14727 1248 aa20.36■□□□□ 0.85
SDF4-204ENST00000459994 KIF3CO14782 793 aa20.36■□□□□ 0.85
SDF4-204ENST00000459994 NPM2Q86SE8 214 aaKnown RBP20.36■□□□□ 0.85
SDF4-204ENST00000459994 H0YIN7 160 aa20.35■□□□□ 0.85
SDF4-204ENST00000459994 TTLL7Q6ZT98 887 aa20.35■□□□□ 0.85
SDF4-204ENST00000459994 TTLL6Q8N841 843 aa20.35■□□□□ 0.85
SDF4-204ENST00000459994 CNBD1Q8NA66 436 aa20.35■□□□□ 0.85
SDF4-204ENST00000459994 BRIP1Q9BX63 1249 aa20.35■□□□□ 0.85
SDF4-204ENST00000459994 TSPYL4Q9UJ04 414 aa20.35■□□□□ 0.85
SDF4-204ENST00000459994 TRIM35Q9UPQ4 493 aa20.35■□□□□ 0.85
SDF4-204ENST00000459994 ANKRD36CQ5JPF3 1778 aa20.35■□□□□ 0.85
SDF4-204ENST00000459994 FAM177BA6PVY3 158 aa20.34■□□□□ 0.85
SDF4-204ENST00000459994 MYL6BP14649 208 aa20.34■□□□□ 0.85
SDF4-204ENST00000459994 ZNF622Q969S3 477 aaKnown RBP eCLIP20.34■□□□□ 0.85
SDF4-204ENST00000459994 RNF181Q9P0P0 153 aa20.34■□□□□ 0.85
SDF4-204ENST00000459994 ZNF219Q9P2Y4 722 aaPredicted RBP20.34■□□□□ 0.85
SDF4-204ENST00000459994 KRT24Q2M2I5 525 aa20.33■□□□□ 0.85
SDF4-204ENST00000459994 CLEC4GQ6UXB4 293 aa20.33■□□□□ 0.85
SDF4-204ENST00000459994 NMRK2Q9NPI5 230 aa20.33■□□□□ 0.85
SDF4-204ENST00000459994 NIP7Q9Y221 180 aaKnown RBP eCLIP20.33■□□□□ 0.852e-9■□□□□ 9.6
SDF4-204ENST00000459994 NFKBIEO00221 500 aa20.31■□□□□ 0.84
SDF4-204ENST00000459994 ANXA1P04083 346 aa20.31■□□□□ 0.84
SDF4-204ENST00000459994 PDE6BP35913 854 aa20.31■□□□□ 0.84
SDF4-204ENST00000459994 PROSER3Q2NL68 480 aa20.31■□□□□ 0.84
SDF4-204ENST00000459994 LRP10Q7Z4F1 713 aa20.31■□□□□ 0.84
SDF4-204ENST00000459994 NBPF5PQ86XG9 351 aaPredicted RBP20.31■□□□□ 0.84
SDF4-204ENST00000459994 SRGNP10124 158 aa20.3■□□□□ 0.84
SDF4-204ENST00000459994 ST5P78524 1137 aa20.3■□□□□ 0.84
SDF4-204ENST00000459994 HNRNPUQ00839 825 aaKnown RBP eCLIP20.3■□□□□ 0.84
SDF4-204ENST00000459994 PDIA6Q15084 440 aa20.3■□□□□ 0.84
SDF4-204ENST00000459994 ZNF652Q9Y2D9 606 aa20.3■□□□□ 0.84
SDF4-204ENST00000459994 LAMB2P55268 1798 aa20.3■□□□□ 0.84
SDF4-204ENST00000459994 MAP3K15Q6ZN16 1313 aa20.29■□□□□ 0.84
SDF4-204ENST00000459994 NPHP1O15259 732 aa20.29■□□□□ 0.84
SDF4-204ENST00000459994 C21orf2O43822 256 aa20.29■□□□□ 0.84
SDF4-204ENST00000459994 EIF2S2P20042 333 aaKnown RBP20.29■□□□□ 0.84
SDF4-204ENST00000459994 CCDC27Q2M243 656 aa20.29■□□□□ 0.84
SDF4-204ENST00000459994 NECTIN2Q92692 538 aa20.29■□□□□ 0.84
SDF4-204ENST00000459994 ZBTB3Q9H5J0 574 aa20.29■□□□□ 0.84
SDF4-204ENST00000459994 ABCC12Q96J65 1359 aa20.29■□□□□ 0.84
SDF4-204ENST00000459994 UBN2Q6ZU65 1347 aa20.28■□□□□ 0.84
SDF4-204ENST00000459994 LMOD3Q0VAK6 560 aa20.27■□□□□ 0.84
SDF4-204ENST00000459994 NUTM1Q86Y26 1132 aa20.27■□□□□ 0.84
SDF4-204ENST00000459994 LAS1LQ9Y4W2 734 aaKnown RBP20.27■□□□□ 0.84
SDF4-204ENST00000459994 CHL1O00533 1208 aa20.26■□□□□ 0.83
SDF4-204ENST00000459994 GPTP24298 496 aa20.26■□□□□ 0.83
SDF4-204ENST00000459994 PRPF40BQ6NWY9 871 aaKnown RBP20.26■□□□□ 0.83
SDF4-204ENST00000459994 ERVV-1B6SEH8 477 aa20.25■□□□□ 0.83
SDF4-204ENST00000459994 RGL2O15211 777 aa20.25■□□□□ 0.83
SDF4-204ENST00000459994 STYK1Q6J9G0 422 aa20.25■□□□□ 0.83
SDF4-204ENST00000459994 OLFM4Q6UX06 510 aa20.25■□□□□ 0.83
SDF4-204ENST00000459994 MASTLQ96GX5 879 aa20.25■□□□□ 0.83
SDF4-204ENST00000459994 TAF1P21675 1872 aa20.24■□□□□ 0.83
SDF4-204ENST00000459994 KLRG2A4D1S0 409 aaPredicted RBP20.24■□□□□ 0.83
SDF4-204ENST00000459994 LMNB1P20700 586 aa20.24■□□□□ 0.83
SDF4-204ENST00000459994 TPTE2Q6XPS3 522 aa20.24■□□□□ 0.83
SDF4-204ENST00000459994 KIF6Q6ZMV9 814 aa20.24■□□□□ 0.83
SDF4-204ENST00000459994 SLC51AQ86UW1 340 aa20.24■□□□□ 0.83
SDF4-204ENST00000459994 BABAM1Q9NWV8 329 aa20.24■□□□□ 0.83
SDF4-204ENST00000459994 PDZRN3Q9UPQ7 1066 aa20.24■□□□□ 0.83
SDF4-204ENST00000459994 ERBB4Q15303 1308 aa20.24■□□□□ 0.83
SDF4-204ENST00000459994 ZBED9Q6R2W3 1325 aa20.24■□□□□ 0.83
SDF4-204ENST00000459994 ERFEQ4G0M1 354 aa20.23■□□□□ 0.83
SDF4-204ENST00000459994 SUSD4Q5VX71 490 aa20.23■□□□□ 0.83
SDF4-204ENST00000459994 WWC1Q8IX03 1113 aa20.23■□□□□ 0.83
SDF4-204ENST00000459994 ZNF521Q96K83 1311 aa20.23■□□□□ 0.83
SDF4-204ENST00000459994 ZNF34Q8IZ26 560 aa20.22■□□□□ 0.83
SDF4-204ENST00000459994 C7orf43Q8WVR3 580 aa20.22■□□□□ 0.83
SDF4-204ENST00000459994 CNKSR1Q969H4 720 aa20.22■□□□□ 0.83
SDF4-204ENST00000459994 YTHDC1Q96MU7 727 aaKnown RBP20.22■□□□□ 0.83
SDF4-204ENST00000459994 RRAGCQ9HB90 399 aa20.22■□□□□ 0.83
SDF4-204ENST00000459994 SALL2Q9Y467 1007 aaPredicted RBP20.22■□□□□ 0.83
SDF4-204ENST00000459994 GIGYF2Q6Y7W6 1299 aaKnown RBP20.21■□□□□ 0.83
SDF4-204ENST00000459994 WDR90Q96KV7 1748 aa20.21■□□□□ 0.83
SDF4-204ENST00000459994 CEP350Q5VT06 3117 aa20.2■□□□□ 0.82
SDF4-204ENST00000459994 DDX60Q8IY21 1712 aaKnown RBP20.2■□□□□ 0.82
SDF4-204ENST00000459994 NTSR2O95665 410 aa20.2■□□□□ 0.82
SDF4-204ENST00000459994 NPR1P16066 1061 aa20.2■□□□□ 0.82
SDF4-204ENST00000459994 C3orf67Q6ZVT6 689 aa20.2■□□□□ 0.82
SDF4-204ENST00000459994 WDR63Q8IWG1 891 aa20.2■□□□□ 0.82
SDF4-204ENST00000459994 HSPA6P17066 643 aa20.19■□□□□ 0.82
SDF4-204ENST00000459994 AIMP1Q12904 312 aaKnown RBP20.19■□□□□ 0.82
SDF4-204ENST00000459994 COPS6Q7L5N1 327 aa20.19■□□□□ 0.82
SDF4-204ENST00000459994 XAGE3Q8WTP9 111 aa20.19■□□□□ 0.82
SDF4-204ENST00000459994 ZNF428Q96B54 188 aa20.19■□□□□ 0.82
SDF4-204ENST00000459994 MBIPQ9NS73 344 aa20.19■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms