RNA–Protein interactions for RNA: ENST00000459990.5

SYN3-205, Transcript of synapsin III, humanhuman

TSL 4

Gene SYN3, Length 574 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYN3-205ENST00000459990 CNBD1Q8NA66 436 aa13.14□□□□□ -0.31
SYN3-205ENST00000459990 ZNF622Q969S3 477 aaKnown RBP eCLIP13.14□□□□□ -0.31
SYN3-205ENST00000459990 CFAP53Q96M91 514 aa13.14□□□□□ -0.31
SYN3-205ENST00000459990 ZNF219Q9P2Y4 722 aaPredicted RBP13.14□□□□□ -0.31
SYN3-205ENST00000459990 PDE6BP35913 854 aa13.13□□□□□ -0.31
SYN3-205ENST00000459990 SNED1Q8TER0 1413 aa13.13□□□□□ -0.31
SYN3-205ENST00000459990 ADAMTSL1Q8N6G6 1762 aa13.12□□□□□ -0.31
SYN3-205ENST00000459990 SRGNP10124 158 aa13.12□□□□□ -0.31
SYN3-205ENST00000459990 PRPF40BQ6NWY9 871 aaKnown RBP13.12□□□□□ -0.31
SYN3-205ENST00000459990 KLRG1Q96E93 195 aa13.12□□□□□ -0.31
SYN3-205ENST00000459990 SETDB2Q96T68 719 aa13.12□□□□□ -0.31
SYN3-205ENST00000459990 LTBP3Q9NS15 1303 aa13.12□□□□□ -0.31
SYN3-205ENST00000459990 ABCC12Q96J65 1359 aa13.11□□□□□ -0.31
SYN3-205ENST00000459990 JMYQ8N9B5 988 aa13.11□□□□□ -0.31
SYN3-205ENST00000459990 NUDCQ9Y266 331 aa13.11□□□□□ -0.31
SYN3-205ENST00000459990 COL4A5P29400 1685 aa13.11□□□□□ -0.31
SYN3-205ENST00000459990 SCN4AP35499 1836 aa13.11□□□□□ -0.31
SYN3-205ENST00000459990 LAMB2P55268 1798 aa13.1□□□□□ -0.31
SYN3-205ENST00000459990 ANKRD36CQ5JPF3 1778 aa13.1□□□□□ -0.31
SYN3-205ENST00000459990 SNRPA1P09661 255 aaKnown RBP13.1□□□□□ -0.31
SYN3-205ENST00000459990 STYK1Q6J9G0 422 aa13.1□□□□□ -0.31
SYN3-205ENST00000459990 SMC1BQ8NDV3 1235 aa13.1□□□□□ -0.31
SYN3-205ENST00000459990 MIS18AQ9NYP9 233 aa13.1□□□□□ -0.31
SYN3-205ENST00000459990 POTEIP0CG38 1075 aa13.09□□□□□ -0.31
SYN3-205ENST00000459990 POTEJP0CG39 1038 aa13.09□□□□□ -0.31
SYN3-205ENST00000459990 VEGFAP15692 232 aaPredicted RBP13.09□□□□□ -0.31
SYN3-205ENST00000459990 ST5P78524 1137 aa13.09□□□□□ -0.31
SYN3-205ENST00000459990 HLFQ16534 295 aa13.09□□□□□ -0.31
SYN3-205ENST00000459990 OLFM4Q6UX06 510 aa13.09□□□□□ -0.31
SYN3-205ENST00000459990 C7orf43Q8WVR3 580 aa13.09□□□□□ -0.31
SYN3-205ENST00000459990 RTF1Q92541 710 aaKnown RBP13.09□□□□□ -0.31
SYN3-205ENST00000459990 PLEKHF1Q96S99 279 aa13.09□□□□□ -0.31
SYN3-205ENST00000459990 THUMPD2Q9BTF0 503 aaKnown RBP13.09□□□□□ -0.31
SYN3-205ENST00000459990 TAOK3Q9H2K8 898 aa13.09□□□□□ -0.31
SYN3-205ENST00000459990 PDZRN3Q9UPQ7 1066 aa13.09□□□□□ -0.31
SYN3-205ENST00000459990 ERFEQ4G0M1 354 aa13.08□□□□□ -0.32
SYN3-205ENST00000459990 CLEC4GQ6UXB4 293 aa13.08□□□□□ -0.32
SYN3-205ENST00000459990 SLC51AQ86UW1 340 aa13.08□□□□□ -0.32
SYN3-205ENST00000459990 MASTLQ96GX5 879 aa13.08□□□□□ -0.32
SYN3-205ENST00000459990 LTBP1Q14766 1721 aa13.08□□□□□ -0.32
SYN3-205ENST00000459990 KLRG2A4D1S0 409 aaPredicted RBP13.07□□□□□ -0.32
SYN3-205ENST00000459990 HTATSF1O43719 755 aaKnown RBP13.07□□□□□ -0.32
SYN3-205ENST00000459990 DDNO94850 711 aaPredicted RBP13.07□□□□□ -0.32
SYN3-205ENST00000459990 NBPF5PQ86XG9 351 aaPredicted RBP13.07□□□□□ -0.32
SYN3-205ENST00000459990 CNKSR1Q969H4 720 aa13.07□□□□□ -0.32
SYN3-205ENST00000459990 NIP7Q9Y221 180 aaKnown RBP eCLIP13.07□□□□□ -0.32
SYN3-205ENST00000459990 FAM177BA6PVY3 158 aa13.06□□□□□ -0.32
SYN3-205ENST00000459990 NPHP1O15259 732 aa13.06□□□□□ -0.32
SYN3-205ENST00000459990 TAF7Q15545 349 aaPredicted RBP13.06□□□□□ -0.32
SYN3-205ENST00000459990 UBN2Q6ZU65 1347 aa13.06□□□□□ -0.32
SYN3-205ENST00000459990 NPM2Q86SE8 214 aaKnown RBP13.05□□□□□ -0.32
SYN3-205ENST00000459990 ZNF652Q9Y2D9 606 aa13.05□□□□□ -0.32
SYN3-205ENST00000459990 ZNF541Q9H0D2 1346 aa13.05□□□□□ -0.32
SYN3-205ENST00000459990 RIC1Q4ADV7 1423 aa13.05□□□□□ -0.32
SYN3-205ENST00000459990 RGL2O15211 777 aa13.04□□□□□ -0.32
SYN3-205ENST00000459990 NPR1P16066 1061 aa13.04□□□□□ -0.32
SYN3-205ENST00000459990 EIF4A1P60842 406 aaKnown RBP13.04□□□□□ -0.32
SYN3-205ENST00000459990 COL13A1Q5TAT6 717 aaPredicted RBP13.04□□□□□ -0.32
SYN3-205ENST00000459990 TTLL7Q6ZT98 887 aa13.04□□□□□ -0.32
SYN3-205ENST00000459990 NFE2L2Q16236 605 aa13.03□□□□□ -0.32
SYN3-205ENST00000459990 CCDC93Q567U6 631 aa13.03□□□□□ -0.32
SYN3-205ENST00000459990 LRP10Q7Z4F1 713 aa13.03□□□□□ -0.32
SYN3-205ENST00000459990 NUTM1Q86Y26 1132 aa13.03□□□□□ -0.32
SYN3-205ENST00000459990 NGEFQ8N5V2 710 aa13.03□□□□□ -0.32
SYN3-205ENST00000459990 ZNF277Q9NRM2 450 aaPredicted RBP13.03□□□□□ -0.32
SYN3-205ENST00000459990 MAP3K15Q6ZN16 1313 aa13.03□□□□□ -0.32
SYN3-205ENST00000459990 TAF1P21675 1872 aa13.03□□□□□ -0.32
SYN3-205ENST00000459990 FKBP4Q02790 459 aaKnown RBP eCLIP13.02□□□□□ -0.33
SYN3-205ENST00000459990 CRY2Q49AN0 593 aa13.02□□□□□ -0.33
SYN3-205ENST00000459990 DPY19L2Q6NUT2 758 aa13.02□□□□□ -0.33
SYN3-205ENST00000459990 IBTKQ9P2D0 1353 aaPredicted RBP13.02□□□□□ -0.33
SYN3-205ENST00000459990 DDX60Q8IY21 1712 aaKnown RBP13.02□□□□□ -0.33
SYN3-205ENST00000459990 MYL6BP14649 208 aa13.01□□□□□ -0.33
SYN3-205ENST00000459990 SOGA3Q5TF21 947 aa13.01□□□□□ -0.33
SYN3-205ENST00000459990 TPTE2Q6XPS3 522 aa13.01□□□□□ -0.33
SYN3-205ENST00000459990 C3orf67Q6ZVT6 689 aa13.01□□□□□ -0.33
SYN3-205ENST00000459990 L3MBTL3Q96JM7 780 aaPredicted RBP13.01□□□□□ -0.33
SYN3-205ENST00000459990 ZBTB3Q9H5J0 574 aa13.01□□□□□ -0.33
SYN3-205ENST00000459990 COL4A1P02462 1669 aa13□□□□□ -0.33
SYN3-205ENST00000459990 PASKQ96RG2 1323 aa13□□□□□ -0.33
SYN3-205ENST00000459990 HSPA1AP0DMV8 641 aaKnown RBP13□□□□□ -0.33
SYN3-205ENST00000459990 HSPA1BP0DMV9 641 aaKnown RBP13□□□□□ -0.33
SYN3-205ENST00000459990 GPTP24298 496 aa13□□□□□ -0.33
SYN3-205ENST00000459990 CHADLQ6NUI6 762 aa13□□□□□ -0.33
SYN3-205ENST00000459990 RRP7AQ9Y3A4 280 aaKnown RBP13□□□□□ -0.33
SYN3-205ENST00000459990 LRRC37AA6NMS7 1700 aa12.99□□□□□ -0.33
SYN3-205ENST00000459990 RNF123Q5XPI4 1314 aa12.99□□□□□ -0.33
SYN3-205ENST00000459990 ERVV-1B6SEH8 477 aa12.99□□□□□ -0.33
SYN3-205ENST00000459990 NTSR2O95665 410 aa12.99□□□□□ -0.33
SYN3-205ENST00000459990 PROSER3Q2NL68 480 aa12.99□□□□□ -0.33
SYN3-205ENST00000459990 SUSD4Q5VX71 490 aa12.99□□□□□ -0.33
SYN3-205ENST00000459990 PNISRQ8TF01 805 aaKnown RBP12.99□□□□□ -0.33
SYN3-205ENST00000459990 TAF1DQ9H5J8 278 aaPredicted RBP12.99□□□□□ -0.33
SYN3-205ENST00000459990 FZD9O00144 591 aa12.98□□□□□ -0.33
SYN3-205ENST00000459990 ANXA1P04083 346 aa12.98□□□□□ -0.33
SYN3-205ENST00000459990 IARSP41252 1262 aaKnown RBP12.98□□□□□ -0.33
SYN3-205ENST00000459990 PDIA6Q15084 440 aa12.98□□□□□ -0.33
SYN3-205ENST00000459990 ZNF34Q8IZ26 560 aa12.98□□□□□ -0.33
SYN3-205ENST00000459990 THSD7BQ9C0I4 1608 aa12.98□□□□□ -0.33
SYN3-205ENST00000459990 DUOX1Q9NRD9 1551 aa12.98□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms