RNA–Protein interactions for RNA: ENST00000459904.1

LMNA-209, Transcript of lamin A/C, humanhuman

TSL 2

Gene LMNA, Length 916 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNA-209ENST00000459904 SETDB2Q96T68 719 aa20.25■□□□□ 0.83
LMNA-209ENST00000459904 PDE6BP35913 854 aa20.24■□□□□ 0.83
LMNA-209ENST00000459904 ERFEQ4G0M1 354 aa20.24■□□□□ 0.83
LMNA-209ENST00000459904 OLFM4Q6UX06 510 aa20.24■□□□□ 0.83
LMNA-209ENST00000459904 CNBD1Q8NA66 436 aa20.24■□□□□ 0.83
LMNA-209ENST00000459904 DDNO94850 711 aaPredicted RBP20.23■□□□□ 0.83
LMNA-209ENST00000459904 TEX13AQ9BXU3 409 aaPredicted RBP20.23■□□□□ 0.83
LMNA-209ENST00000459904 ZC3H4Q9UPT8 1303 aaKnown RBP20.23■□□□□ 0.83
LMNA-209ENST00000459904 NPC1L1Q9UHC9 1359 aa20.22■□□□□ 0.83
LMNA-209ENST00000459904 PRPF40BQ6NWY9 871 aaKnown RBP20.22■□□□□ 0.83
LMNA-209ENST00000459904 MIS18AQ9NYP9 233 aa20.22■□□□□ 0.83
LMNA-209ENST00000459904 NUP98P52948 1817 aa20.22■□□□□ 0.83
LMNA-209ENST00000459904 U2AF1L5P0DN76 240 aaPredicted RBP20.21■□□□□ 0.83
LMNA-209ENST00000459904 U2AF1Q01081 240 aaKnown RBP eCLIP20.21■□□□□ 0.83
LMNA-209ENST00000459904 NBPF26B4DH59 902 aa20.2■□□□□ 0.82
LMNA-209ENST00000459904 SRGNP10124 158 aa20.2■□□□□ 0.82
LMNA-209ENST00000459904 NBPF10Q6P3W6 841 aaKnown RBP20.2■□□□□ 0.82
LMNA-209ENST00000459904 NBPF15Q8N660 670 aa20.2■□□□□ 0.82
LMNA-209ENST00000459904 ST5P78524 1137 aa20.19■□□□□ 0.82
LMNA-209ENST00000459904 NPM2Q86SE8 214 aaKnown RBP20.19■□□□□ 0.82
LMNA-209ENST00000459904 HSPA1AP0DMV8 641 aaKnown RBP20.18■□□□□ 0.82
LMNA-209ENST00000459904 HSPA1BP0DMV9 641 aaKnown RBP20.18■□□□□ 0.82
LMNA-209ENST00000459904 PPP2R1AP30153 589 aa20.18■□□□□ 0.82
LMNA-209ENST00000459904 DPY19L2Q6NUT2 758 aa20.18■□□□□ 0.82
LMNA-209ENST00000459904 TAOK3Q9H2K8 898 aa20.18■□□□□ 0.82
LMNA-209ENST00000459904 LAMB4A4D0S4 1761 aa20.18■□□□□ 0.82
LMNA-209ENST00000459904 HLFQ16534 295 aa20.17■□□□□ 0.82
LMNA-209ENST00000459904 STYK1Q6J9G0 422 aa20.17■□□□□ 0.82
LMNA-209ENST00000459904 SLC51AQ86UW1 340 aa20.17■□□□□ 0.82
LMNA-209ENST00000459904 NBPF5PQ86XG9 351 aaPredicted RBP20.17■□□□□ 0.82
LMNA-209ENST00000459904 NGEFQ8N5V2 710 aa20.17■□□□□ 0.82
LMNA-209ENST00000459904 MASTLQ96GX5 879 aa20.17■□□□□ 0.82
LMNA-209ENST00000459904 CFAP53Q96M91 514 aa20.17■□□□□ 0.82
LMNA-209ENST00000459904 CNKSR1Q969H4 720 aa20.16■□□□□ 0.82
LMNA-209ENST00000459904 MKRN1Q9UHC7 482 aaKnown RBP20.16■□□□□ 0.82
LMNA-209ENST00000459904 KDM3BQ7LBC6 1761 aa20.16■□□□□ 0.82
LMNA-209ENST00000459904 SNRPA1P09661 255 aaKnown RBP20.15■□□□□ 0.82
LMNA-209ENST00000459904 RTF1Q92541 710 aaKnown RBP20.15■□□□□ 0.82
LMNA-209ENST00000459904 ZNF277Q9NRM2 450 aaPredicted RBP20.15■□□□□ 0.82
LMNA-209ENST00000459904 NIP7Q9Y221 180 aaKnown RBP eCLIP20.15■□□□□ 0.82
LMNA-209ENST00000459904 SCN4AP35499 1836 aa20.14■□□□□ 0.81
LMNA-209ENST00000459904 C7orf43Q8WVR3 580 aa20.14■□□□□ 0.81
LMNA-209ENST00000459904 ZNF541Q9H0D2 1346 aa20.13■□□□□ 0.81
LMNA-209ENST00000459904 LTBP3Q9NS15 1303 aa20.13■□□□□ 0.81
LMNA-209ENST00000459904 TNS4Q8IZW8 715 aa20.13■□□□□ 0.81
LMNA-209ENST00000459904 PDZRN3Q9UPQ7 1066 aa20.13■□□□□ 0.81
LMNA-209ENST00000459904 NUDCQ9Y266 331 aa20.13■□□□□ 0.81
LMNA-209ENST00000459904 CHADLQ6NUI6 762 aa20.12■□□□□ 0.81
LMNA-209ENST00000459904 THUMPD2Q9BTF0 503 aaKnown RBP20.12■□□□□ 0.81
LMNA-209ENST00000459904 CCDC93Q567U6 631 aa20.1■□□□□ 0.81
LMNA-209ENST00000459904 NUTM1Q86Y26 1132 aa20.1■□□□□ 0.81
LMNA-209ENST00000459904 ABCC12Q96J65 1359 aa20.09■□□□□ 0.81
LMNA-209ENST00000459904 NPR1P16066 1061 aa20.09■□□□□ 0.81
LMNA-209ENST00000459904 EAPPQ56P03 285 aaPredicted RBP20.09■□□□□ 0.81
LMNA-209ENST00000459904 CLEC4GQ6UXB4 293 aa20.09■□□□□ 0.81
LMNA-209ENST00000459904 COL4A5P29400 1685 aa20.09■□□□□ 0.81
LMNA-209ENST00000459904 TAF7Q15545 349 aaPredicted RBP20.08■□□□□ 0.81
LMNA-209ENST00000459904 TTLL7Q6ZT98 887 aa20.08■□□□□ 0.81
LMNA-209ENST00000459904 ZNF652Q9Y2D9 606 aa20.08■□□□□ 0.81
LMNA-209ENST00000459904 RRP7AQ9Y3A4 280 aaKnown RBP20.08■□□□□ 0.81
LMNA-209ENST00000459904 TAF1P21675 1872 aa20.07■□□□□ 0.8
LMNA-209ENST00000459904 GPTP24298 496 aa20.07■□□□□ 0.8
LMNA-209ENST00000459904 FKBP4Q02790 459 aaKnown RBP eCLIP20.07■□□□□ 0.8
LMNA-209ENST00000459904 TPTE2Q6XPS3 522 aa20.07■□□□□ 0.8
LMNA-209ENST00000459904 TAF1DQ9H5J8 278 aaPredicted RBP20.07■□□□□ 0.8
LMNA-209ENST00000459904 TCERG1O14776 1098 aaKnown RBP20.06■□□□□ 0.8
LMNA-209ENST00000459904 MYL6BP14649 208 aa20.06■□□□□ 0.8
LMNA-209ENST00000459904 SYNE4Q8N205 404 aa20.06■□□□□ 0.8
LMNA-209ENST00000459904 ADAMTSL1Q8N6G6 1762 aa20.06■□□□□ 0.8
LMNA-209ENST00000459904 LTBP1Q14766 1721 aa20.05■□□□□ 0.8
LMNA-209ENST00000459904 KLRG2A4D1S0 409 aaPredicted RBP20.05■□□□□ 0.8
LMNA-209ENST00000459904 GTF2E1P29083 439 aaPredicted RBP20.05■□□□□ 0.8
LMNA-209ENST00000459904 SOGA3Q5TF21 947 aa20.05■□□□□ 0.8
LMNA-209ENST00000459904 CREBZFQ9NS37 354 aa20.05■□□□□ 0.8
LMNA-209ENST00000459904 RNF123Q5XPI4 1314 aa20.04■□□□□ 0.8
LMNA-209ENST00000459904 LAMB2P55268 1798 aa20.04■□□□□ 0.8
LMNA-209ENST00000459904 ZBTB3Q9H5J0 574 aa20.04■□□□□ 0.8
LMNA-209ENST00000459904 CLEC11AQ9Y240 323 aa20.04■□□□□ 0.8
LMNA-209ENST00000459904 FMR1Q06787 632 aaKnown RBP eCLIP20.03■□□□□ 0.81e-9■■□□□ 12.9
LMNA-209ENST00000459904 C3orf67Q6ZVT6 689 aa20.03■□□□□ 0.8
LMNA-209ENST00000459904 PASKQ96RG2 1323 aa20.02■□□□□ 0.8
LMNA-209ENST00000459904 FOXN1O15353 648 aa20.02■□□□□ 0.8
LMNA-209ENST00000459904 IARSP41252 1262 aaKnown RBP20.02■□□□□ 0.8
LMNA-209ENST00000459904 EIF4A1P60842 406 aaKnown RBP20.02■□□□□ 0.8
LMNA-209ENST00000459904 MAP1SQ66K74 1059 aaPredicted RBP20.02■□□□□ 0.8
LMNA-209ENST00000459904 LDHDQ86WU2 507 aa20.02■□□□□ 0.8
LMNA-209ENST00000459904 L3MBTL3Q96JM7 780 aaPredicted RBP20.02■□□□□ 0.8
LMNA-209ENST00000459904 UBN2Q6ZU65 1347 aa20.02■□□□□ 0.79
LMNA-209ENST00000459904 HTATSF1O43719 755 aaKnown RBP20.01■□□□□ 0.79
LMNA-209ENST00000459904 SUSD4Q5VX71 490 aa20.01■□□□□ 0.79
LMNA-209ENST00000459904 ZNF428Q96B54 188 aa20.01■□□□□ 0.79
LMNA-209ENST00000459904 PLEKHF1Q96S99 279 aa20.01■□□□□ 0.79
LMNA-209ENST00000459904 GJA3Q9Y6H8 435 aa20.01■□□□□ 0.79
LMNA-209ENST00000459904 SNED1Q8TER0 1413 aa20.01■□□□□ 0.79
LMNA-209ENST00000459904 MAP3K15Q6ZN16 1313 aa20.01■□□□□ 0.79
LMNA-209ENST00000459904 CNTNAP1P78357 1384 aa20■□□□□ 0.79
LMNA-209ENST00000459904 IQCA1LA6NCM1 817 aa20■□□□□ 0.79
LMNA-209ENST00000459904 ITGBL1O95965 494 aaPredicted RBP20■□□□□ 0.79
LMNA-209ENST00000459904 ANXA1P04083 346 aa20■□□□□ 0.79
LMNA-209ENST00000459904 EPHX2P34913 555 aa20■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 56.5 ms