RNA–Protein interactions for RNA: ENST00000457478.1

LINC01250-201, Transcript of long intergenic non-protein coding RNA 1250, humanhuman

TSL 2 BASIC

Gene LINC01250, Length 2,344 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01250-201ENST00000457478 ROBO2Q9HCK4 1378 aa17.34■□□□□ 0.37
LINC01250-201ENST00000457478 PTCH1Q13635 1447 aa17.34■□□□□ 0.37
LINC01250-201ENST00000457478 ATP8B1O43520 1251 aa17.33■□□□□ 0.37
LINC01250-201ENST00000457478 ZRANB2O95218 330 aaKnown RBP eCLIP17.33■□□□□ 0.37
LINC01250-201ENST00000457478 PPM1EQ8WY54 764 aa17.33■□□□□ 0.37
LINC01250-201ENST00000457478 PLCD4Q9BRC7 762 aa17.33■□□□□ 0.37
LINC01250-201ENST00000457478 C14orf93Q9H972 538 aaKnown RBP17.33■□□□□ 0.37
LINC01250-201ENST00000457478 CCDC196A0A1B0GTZ2 297 aa17.33■□□□□ 0.36
LINC01250-201ENST00000457478 ST5P78524 1137 aa17.33■□□□□ 0.36
LINC01250-201ENST00000457478 SGSM3Q96HU1 749 aa17.33■□□□□ 0.36
LINC01250-201ENST00000457478 AK7Q96M32 723 aa17.33■□□□□ 0.36
LINC01250-201ENST00000457478 PPP1R12AO14974 1030 aaPredicted RBP17.32■□□□□ 0.36
LINC01250-201ENST00000457478 IVLP07476 585 aa17.32■□□□□ 0.36
LINC01250-201ENST00000457478 CT47B1P0C2W7 299 aaPredicted RBP17.32■□□□□ 0.36
LINC01250-201ENST00000457478 CLCN6P51797 869 aa17.32■□□□□ 0.36
LINC01250-201ENST00000457478 DNAJC21Q5F1R6 531 aaKnown RBP17.32■□□□□ 0.36
LINC01250-201ENST00000457478 GTF3C5Q9Y5Q8 519 aaPredicted RBP17.32■□□□□ 0.36
LINC01250-201ENST00000457478 SIPA1L2Q9P2F8 1722 aaPredicted RBP17.32■□□□□ 0.36
LINC01250-201ENST00000457478 GADD45BO75293 160 aaPredicted RBP17.32■□□□□ 0.36
LINC01250-201ENST00000457478 CPP00450 1065 aa17.32■□□□□ 0.36
LINC01250-201ENST00000457478 PLCB2Q00722 1185 aa17.32■□□□□ 0.36
LINC01250-201ENST00000457478 CADPS2Q86UW7 1296 aa17.32■□□□□ 0.36
LINC01250-201ENST00000457478 SLAIN2Q9P270 581 aa17.32■□□□□ 0.36
LINC01250-201ENST00000457478 MAP2K2P36507 400 aa17.31■□□□□ 0.36
LINC01250-201ENST00000457478 NYAP1Q6ZVC0 841 aa17.31■□□□□ 0.36
LINC01250-201ENST00000457478 ZBTB40Q9NUA8 1239 aa17.31■□□□□ 0.36
LINC01250-201ENST00000457478 NOL12Q9UGY1 213 aaKnown RBP eCLIP17.31■□□□□ 0.36
LINC01250-201ENST00000457478 TCHHQ07283 1943 aa17.31■□□□□ 0.36
LINC01250-201ENST00000457478 CALRP27797 417 aaKnown RBP17.31■□□□□ 0.36
LINC01250-201ENST00000457478 ZSCAN25Q6NSZ9 544 aa17.31■□□□□ 0.36
LINC01250-201ENST00000457478 MMS22LQ6ZRQ5 1243 aa17.31■□□□□ 0.36
LINC01250-201ENST00000457478 ANKRD20A12PQ8NF67 263 aa17.31■□□□□ 0.36
LINC01250-201ENST00000457478 EXOC4Q96A65 974 aa17.31■□□□□ 0.36
LINC01250-201ENST00000457478 FBXO3Q9UK99 471 aa17.31■□□□□ 0.36
LINC01250-201ENST00000457478 ARHGAP30Q7Z6I6 1101 aaPredicted RBP17.3■□□□□ 0.36
LINC01250-201ENST00000457478 ELP1O95163 1332 aa17.3■□□□□ 0.36
LINC01250-201ENST00000457478 USP48Q86UV5 1035 aa17.3■□□□□ 0.36
LINC01250-201ENST00000457478 SH3BP1Q9Y3L3 701 aa17.3■□□□□ 0.36
LINC01250-201ENST00000457478 FAM135BQ49AJ0 1406 aa17.29■□□□□ 0.36
LINC01250-201ENST00000457478 YTHDC2Q9H6S0 1430 aaKnown RBP17.29■□□□□ 0.36
LINC01250-201ENST00000457478 ADGRL3Q9HAR2 1447 aa17.29■□□□□ 0.36
LINC01250-201ENST00000457478 KIF3CO14782 793 aa17.29■□□□□ 0.36
LINC01250-201ENST00000457478 U2SURPO15042 1029 aaKnown RBP17.29■□□□□ 0.36
LINC01250-201ENST00000457478 POLR3GO15318 223 aaPredicted RBP17.29■□□□□ 0.36
LINC01250-201ENST00000457478 LRCH2Q5VUJ6 765 aa17.29■□□□□ 0.36
LINC01250-201ENST00000457478 CCDC186Q7Z3E2 898 aa17.29■□□□□ 0.36
LINC01250-201ENST00000457478 AATKQ6ZMQ8 1374 aa17.29■□□□□ 0.36
LINC01250-201ENST00000457478 LRMPQ12912 555 aa17.29■□□□□ 0.36
LINC01250-201ENST00000457478 KIF2AO00139 706 aaPredicted RBP17.28■□□□□ 0.36
LINC01250-201ENST00000457478 ACTN2P35609 894 aa17.28■□□□□ 0.36
LINC01250-201ENST00000457478 ITPRIPQ8IWB1 547 aa17.28■□□□□ 0.36
LINC01250-201ENST00000457478 ZNF592Q92610 1267 aa17.28■□□□□ 0.36
LINC01250-201ENST00000457478 GCC1Q96CN9 775 aa17.28■□□□□ 0.36
LINC01250-201ENST00000457478 ARGLU1Q9NWB6 273 aaPredicted RBP17.28■□□□□ 0.36
LINC01250-201ENST00000457478 ROBO1Q9Y6N7 1651 aa17.28■□□□□ 0.36
LINC01250-201ENST00000457478 DCCP43146 1447 aa17.28■□□□□ 0.36
LINC01250-201ENST00000457478 NALCNQ8IZF0 1738 aa17.28■□□□□ 0.36
LINC01250-201ENST00000457478 E2F4Q16254 413 aa17.27■□□□□ 0.36
LINC01250-201ENST00000457478 WAPLQ7Z5K2 1190 aa17.27■□□□□ 0.36
LINC01250-201ENST00000457478 EXOC6BQ9Y2D4 811 aa17.27■□□□□ 0.36
LINC01250-201ENST00000457478 ABCC11Q96J66 1382 aa17.27■□□□□ 0.36
LINC01250-201ENST00000457478 SHPRHQ149N8 1683 aa17.27■□□□□ 0.36
LINC01250-201ENST00000457478 TRIM27P14373 513 aa17.27■□□□□ 0.35
LINC01250-201ENST00000457478 PTPN14Q15678 1187 aa17.27■□□□□ 0.35
LINC01250-201ENST00000457478 FOXD4L5Q5VV16 416 aaPredicted RBP17.27■□□□□ 0.35
LINC01250-201ENST00000457478 REXO1L1PQ8IX06 675 aa17.27■□□□□ 0.35
LINC01250-201ENST00000457478 FOXD4L4Q8WXT5 416 aaPredicted RBP17.27■□□□□ 0.35
LINC01250-201ENST00000457478 BSDC1Q9NW68 430 aaPredicted RBP17.27■□□□□ 0.35
LINC01250-201ENST00000457478 TECPR2O15040 1411 aa17.27■□□□□ 0.35
LINC01250-201ENST00000457478 MYOM1P52179 1685 aa17.26■□□□□ 0.35
LINC01250-201ENST00000457478 SMARCA5O60264 1052 aaPredicted RBP17.26■□□□□ 0.35
LINC01250-201ENST00000457478 RPS6KA5O75582 802 aa17.26■□□□□ 0.35
LINC01250-201ENST00000457478 SEMA3FQ13275 785 aa17.26■□□□□ 0.35
LINC01250-201ENST00000457478 CCDC27Q2M243 656 aa17.26■□□□□ 0.35
LINC01250-201ENST00000457478 TMCO3Q6UWJ1 677 aa17.26■□□□□ 0.35
LINC01250-201ENST00000457478 L2HGDHQ9H9P8 463 aa17.26■□□□□ 0.35
LINC01250-201ENST00000457478 CUL4AQ13619 759 aa17.26■□□□□ 0.35
LINC01250-201ENST00000457478 C11orf91Q3C1V1 193 aa17.26■□□□□ 0.35
LINC01250-201ENST00000457478 INTS4Q96HW7 963 aaKnown RBP17.26■□□□□ 0.35
LINC01250-201ENST00000457478 EIF3CLB5ME19 914 aaKnown RBP17.25■□□□□ 0.35
LINC01250-201ENST00000457478 MCM2P49736 904 aa17.25■□□□□ 0.35
LINC01250-201ENST00000457478 NBPF9Q3BBW0 867 aa17.25■□□□□ 0.35
LINC01250-201ENST00000457478 NBPF10Q6P3W6 841 aaKnown RBP17.25■□□□□ 0.35
LINC01250-201ENST00000457478 FILIP1Q7Z7B0 1213 aa17.25■□□□□ 0.35
LINC01250-201ENST00000457478 EIF3CQ99613 913 aaKnown RBP17.25■□□□□ 0.35
LINC01250-201ENST00000457478 TACO1Q9BSH4 297 aaKnown RBP17.25■□□□□ 0.35
LINC01250-201ENST00000457478 OAS2P29728 719 aaKnown RBP17.25■□□□□ 0.35
LINC01250-201ENST00000457478 CORO7P57737 925 aa17.25■□□□□ 0.35
LINC01250-201ENST00000457478 UBE2HP62256 183 aa17.25■□□□□ 0.35
LINC01250-201ENST00000457478 KNDC1Q76NI1 1749 aa17.25■□□□□ 0.35
LINC01250-201ENST00000457478 JMYQ8N9B5 988 aa17.25■□□□□ 0.35
LINC01250-201ENST00000457478 KCND1Q9NSA2 647 aa17.25■□□□□ 0.35
LINC01250-201ENST00000457478 CCDC9Q9Y3X0 531 aaKnown RBP17.25■□□□□ 0.35
LINC01250-201ENST00000457478 POLR3AO14802 1390 aaPredicted RBP17.24■□□□□ 0.35
LINC01250-201ENST00000457478 NEMFO60524 1076 aa17.24■□□□□ 0.35
LINC01250-201ENST00000457478 ATF7IPQ6VMQ6 1270 aa17.24■□□□□ 0.35
LINC01250-201ENST00000457478 NBPF11Q86T75 865 aa17.24■□□□□ 0.35
LINC01250-201ENST00000457478 ZSCAN16Q9H4T2 348 aaPredicted RBP17.24■□□□□ 0.35
LINC01250-201ENST00000457478 RPAP1Q9BWH6 1393 aaPredicted RBP17.24■□□□□ 0.35
LINC01250-201ENST00000457478 FAM200AQ8TCP9 573 aa17.24■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms