RNA–Protein interactions for RNA: ENST00000457153.6

SYT1-204, Transcript of synaptotagmin 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SYT1, Length 4,592 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYT1-204ENST00000457153 AKAP17AQ02040 695 aaKnown RBP16.67■□□□□ 0.26
SYT1-204ENST00000457153 STK3Q13188 491 aa16.67■□□□□ 0.26
SYT1-204ENST00000457153 MYOM1P52179 1685 aa16.67■□□□□ 0.26
SYT1-204ENST00000457153 GCP02774 474 aa16.66■□□□□ 0.26
SYT1-204ENST00000457153 SIRT2Q8IXJ6 389 aa16.66■□□□□ 0.26
SYT1-204ENST00000457153 ZSCAN25Q6NSZ9 544 aa16.66■□□□□ 0.26
SYT1-204ENST00000457153 ZGPATQ8N5A5 531 aaKnown RBP16.66■□□□□ 0.26
SYT1-204ENST00000457153 RNMTO43148 476 aaKnown RBP16.66■□□□□ 0.26
SYT1-204ENST00000457153 HS1BP3Q53T59 392 aa16.66■□□□□ 0.26
SYT1-204ENST00000457153 TRIM5Q9C035 493 aa16.66■□□□□ 0.26
SYT1-204ENST00000457153 MAP3K11Q16584 847 aa16.65■□□□□ 0.26
SYT1-204ENST00000457153 SDF4Q9BRK5 362 aa16.65■□□□□ 0.26
SYT1-204ENST00000457153 AGLP35573 1532 aa16.65■□□□□ 0.26
SYT1-204ENST00000457153 RBM33Q96EV2 1170 aaKnown RBP16.65■□□□□ 0.26
SYT1-204ENST00000457153 NFXL1Q6ZNB6 911 aa16.65■□□□□ 0.26
SYT1-204ENST00000457153 ANKRD13DQ6ZTN6 518 aa16.65■□□□□ 0.26
SYT1-204ENST00000457153 FAM13BQ9NYF5 915 aa16.65■□□□□ 0.26
SYT1-204ENST00000457153 RAD50Q92878 1312 aa16.65■□□□□ 0.26
SYT1-204ENST00000457153 GJB2P29033 226 aa16.65■□□□□ 0.26
SYT1-204ENST00000457153 A0A087WZG4 1122 aa16.64■□□□□ 0.25
SYT1-204ENST00000457153 PNMA6EA0A0J9YXQ4 647 aa16.64■□□□□ 0.25
SYT1-204ENST00000457153 SAFBQ15424 915 aaKnown RBP eCLIP16.64■□□□□ 0.25
SYT1-204ENST00000457153 AKAP2Q9Y2D5 859 aa16.64■□□□□ 0.25
SYT1-204ENST00000457153 SSH3Q8TE77 659 aa16.64■□□□□ 0.25
SYT1-204ENST00000457153 DDX21Q9NR30 783 aaKnown RBP eCLIP16.64■□□□□ 0.25
SYT1-204ENST00000457153 ERICH2A1L162 156 aa16.63■□□□□ 0.25
SYT1-204ENST00000457153 GTF2E1P29083 439 aaPredicted RBP16.63■□□□□ 0.25
SYT1-204ENST00000457153 FRMPD1Q5SYB0 1578 aa16.63■□□□□ 0.25
SYT1-204ENST00000457153 TSPOAP1O95153 1857 aa16.63■□□□□ 0.25
SYT1-204ENST00000457153 DHX8Q14562 1220 aaKnown RBP16.63■□□□□ 0.25
SYT1-204ENST00000457153 IL17REQ8NFR9 667 aa16.63■□□□□ 0.25
SYT1-204ENST00000457153 LRRC59Q96AG4 307 aaKnown RBP16.63■□□□□ 0.25
SYT1-204ENST00000457153 RBM27Q9P2N5 1060 aaKnown RBP16.63■□□□□ 0.25
SYT1-204ENST00000457153 ZNF445P59923 1031 aa16.62■□□□□ 0.25
SYT1-204ENST00000457153 IBTKQ9P2D0 1353 aaPredicted RBP16.62■□□□□ 0.25
SYT1-204ENST00000457153 EIF4A1P60842 406 aaKnown RBP16.62■□□□□ 0.25
SYT1-204ENST00000457153 FOSBP53539 338 aa16.62■□□□□ 0.25
SYT1-204ENST00000457153 USP44Q9H0E7 712 aa16.62■□□□□ 0.25
SYT1-204ENST00000457153 VPS53Q5VIR6 699 aa16.62■□□□□ 0.25
SYT1-204ENST00000457153 STAP2Q9UGK3 403 aa16.62■□□□□ 0.25
SYT1-204ENST00000457153 SGSM2O43147 1006 aa16.61■□□□□ 0.25
SYT1-204ENST00000457153 RBM8AQ9Y5S9 174 aaKnown RBP16.61■□□□□ 0.25
SYT1-204ENST00000457153 STK38Q15208 465 aa16.61■□□□□ 0.25
SYT1-204ENST00000457153 CADPS2Q86UW7 1296 aa16.61■□□□□ 0.25
SYT1-204ENST00000457153 DDX54Q8TDD1 881 aaKnown RBP16.61■□□□□ 0.25
SYT1-204ENST00000457153 XAGE3Q8WTP9 111 aa16.61■□□□□ 0.25
SYT1-204ENST00000457153 JMYQ8N9B5 988 aa16.6■□□□□ 0.25
SYT1-204ENST00000457153 CNNM1Q9NRU3 951 aa16.6■□□□□ 0.25
SYT1-204ENST00000457153 DDX19AQ9NUU7 478 aaKnown RBP16.6■□□□□ 0.25
SYT1-204ENST00000457153 PREX1Q8TCU6 1659 aa16.6■□□□□ 0.25
SYT1-204ENST00000457153 SART3Q15020 963 aaKnown RBP16.6■□□□□ 0.25
SYT1-204ENST00000457153 SYTL4Q96C24 671 aaPredicted RBP16.6■□□□□ 0.25
SYT1-204ENST00000457153 GDPD2Q9HCC8 539 aa16.6■□□□□ 0.25
SYT1-204ENST00000457153 RRP9O43818 475 aaKnown RBP16.6■□□□□ 0.25
SYT1-204ENST00000457153 IFIT1P09914 478 aaKnown RBP16.6■□□□□ 0.25
SYT1-204ENST00000457153 COPS6Q7L5N1 327 aa16.6■□□□□ 0.25
SYT1-204ENST00000457153 FERMT3Q86UX7 667 aa16.6■□□□□ 0.25
SYT1-204ENST00000457153 ARHGEF28Q8N1W1 1705 aaKnown RBP16.6■□□□□ 0.25
SYT1-204ENST00000457153 UBE3BQ7Z3V4 1068 aa16.6■□□□□ 0.25
SYT1-204ENST00000457153 FSD2A1L4K1 749 aa16.59■□□□□ 0.25
SYT1-204ENST00000457153 F13A1P00488 732 aa16.59■□□□□ 0.25
SYT1-204ENST00000457153 AK2P54819 239 aa16.59■□□□□ 0.25
SYT1-204ENST00000457153 FKBP4Q02790 459 aaKnown RBP eCLIP16.59■□□□□ 0.25
SYT1-204ENST00000457153 IMMTQ16891 758 aaKnown RBP16.59■□□□□ 0.25
SYT1-204ENST00000457153 USP48Q86UV5 1035 aa16.59■□□□□ 0.25
SYT1-204ENST00000457153 STRN4Q9NRL3 753 aa16.59■□□□□ 0.25
SYT1-204ENST00000457153 ANKARQ7Z5J8 1434 aa16.59■□□□□ 0.25
SYT1-204ENST00000457153 HSPA4P34932 840 aa16.59■□□□□ 0.25
SYT1-204ENST00000457153 NEK1Q96PY6 1258 aa16.59■□□□□ 0.25
SYT1-204ENST00000457153 C19orf44Q9H6X5 657 aa16.59■□□□□ 0.25
SYT1-204ENST00000457153 CWC25Q9NXE8 425 aaPredicted RBP16.59■□□□□ 0.25
SYT1-204ENST00000457153 CDC42BPGQ6DT37 1551 aa16.59■□□□□ 0.25
SYT1-204ENST00000457153 REREQ9P2R6 1566 aa16.59■□□□□ 0.25
SYT1-204ENST00000457153 STARD3NLO95772 234 aa16.58■□□□□ 0.25
SYT1-204ENST00000457153 NBPF6Q5VWK0 638 aa16.58■□□□□ 0.25
SYT1-204ENST00000457153 NBPF4Q96M43 638 aa16.58■□□□□ 0.25
SYT1-204ENST00000457153 CDKL5O76039 1030 aa16.58■□□□□ 0.25
SYT1-204ENST00000457153 ME1P48163 572 aa16.58■□□□□ 0.25
SYT1-204ENST00000457153 PRIM1P49642 420 aaKnown RBP16.58■□□□□ 0.25
SYT1-204ENST00000457153 NPHP3Q7Z494 1330 aa16.58■□□□□ 0.24
SYT1-204ENST00000457153 LGR6Q9HBX8 967 aa16.58■□□□□ 0.24
SYT1-204ENST00000457153 LMBRD1Q9NUN5 540 aa16.58■□□□□ 0.24
SYT1-204ENST00000457153 CAVIN2O95810 425 aa16.57■□□□□ 0.24
SYT1-204ENST00000457153 CTAGE5O15320 804 aa16.57■□□□□ 0.24
SYT1-204ENST00000457153 CWF19L2Q2TBE0 894 aaKnown RBP16.57■□□□□ 0.24
SYT1-204ENST00000457153 TEX13AQ9BXU3 409 aaPredicted RBP16.57■□□□□ 0.24
SYT1-204ENST00000457153 PA2G4Q9UQ80 394 aaKnown RBP16.57■□□□□ 0.24
SYT1-204ENST00000457153 DCAF5Q96JK2 942 aa16.57■□□□□ 0.24
SYT1-204ENST00000457153 ZSCAN16Q9H4T2 348 aaPredicted RBP16.57■□□□□ 0.24
SYT1-204ENST00000457153 NBPF7P0C2Y1 421 aaPredicted RBP16.56■□□□□ 0.24
SYT1-204ENST00000457153 CEBPZQ03701 1054 aaKnown RBP16.56■□□□□ 0.24
SYT1-204ENST00000457153 CCDC171Q6TFL3 1326 aa16.56■□□□□ 0.24
SYT1-204ENST00000457153 XBP1P17861 261 aa16.56■□□□□ 0.24
SYT1-204ENST00000457153 LARP6Q9BRS8 491 aaKnown RBP16.56■□□□□ 0.24
SYT1-204ENST00000457153 COL3A1P02461 1466 aaPredicted RBP16.56■□□□□ 0.24
SYT1-204ENST00000457153 ADGRB2O60241 1585 aa16.56■□□□□ 0.24
SYT1-204ENST00000457153 TMEM131LA2VDJ0 1609 aa16.56■□□□□ 0.24
SYT1-204ENST00000457153 NMIQ13287 307 aaPredicted RBP16.56■□□□□ 0.24
SYT1-204ENST00000457153 HSP90AB3PQ58FF7 597 aa16.55■□□□□ 0.24
SYT1-204ENST00000457153 OLFM4Q6UX06 510 aa16.55■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms