RNA–Protein interactions for RNA: ENST00000456957.2

PKNOX1-204, Transcript of PBX/knotted 1 homeobox 1, humanhuman

TSL 3

Gene PKNOX1, Length 569 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKNOX1-204ENST00000456957 ADCY9O60503 1353 aa20.65■□□□□ 0.9
PKNOX1-204ENST00000456957 FKBP5Q13451 457 aaPredicted RBP20.65■□□□□ 0.9
PKNOX1-204ENST00000456957 KIF6Q6ZMV9 814 aa20.65■□□□□ 0.9
PKNOX1-204ENST00000456957 FRAT1Q92837 279 aaPredicted RBP20.65■□□□□ 0.9
PKNOX1-204ENST00000456957 ARHGEF1Q92888 912 aaKnown RBP20.65■□□□□ 0.9
PKNOX1-204ENST00000456957 ARXQ96QS3 562 aa20.64■□□□□ 0.89
PKNOX1-204ENST00000456957 MAP3K15Q6ZN16 1313 aa20.63■□□□□ 0.89
PKNOX1-204ENST00000456957 USP42Q9H9J4 1324 aaKnown RBP20.63■□□□□ 0.89
PKNOX1-204ENST00000456957 CAMTA2O94983 1202 aa20.63■□□□□ 0.89
PKNOX1-204ENST00000456957 DDX58O95786 925 aaKnown RBP20.63■□□□□ 0.89
PKNOX1-204ENST00000456957 ANKRD13DQ6ZTN6 518 aa20.63■□□□□ 0.89
PKNOX1-204ENST00000456957 COL23A1Q86Y22 540 aaPredicted RBP20.63■□□□□ 0.89
PKNOX1-204ENST00000456957 ZBTB3Q9H5J0 574 aa20.63■□□□□ 0.89
PKNOX1-204ENST00000456957 RFC4P35249 363 aa20.62■□□□□ 0.89
PKNOX1-204ENST00000456957 ZKSCAN2Q63HK3 967 aa20.62■□□□□ 0.89
PKNOX1-204ENST00000456957 KSR2Q6VAB6 950 aa20.62■□□□□ 0.89
PKNOX1-204ENST00000456957 FLAD1Q8NFF5 587 aa20.62■□□□□ 0.89
PKNOX1-204ENST00000456957 PLBD2Q8NHP8 589 aa20.62■□□□□ 0.89
PKNOX1-204ENST00000456957 ARHGAP45Q92619 1136 aa20.62■□□□□ 0.89
PKNOX1-204ENST00000456957 SRP68Q9UHB9 627 aaKnown RBP20.62■□□□□ 0.89
PKNOX1-204ENST00000456957 NARFQ9UHQ1 456 aa20.62■□□□□ 0.89
PKNOX1-204ENST00000456957 PI4KAP2A4QPH2 592 aa20.61■□□□□ 0.89
PKNOX1-204ENST00000456957 PSDA5PKW4 1024 aaPredicted RBP20.61■□□□□ 0.89
PKNOX1-204ENST00000456957 IPO8O15397 1037 aaKnown RBP20.61■□□□□ 0.89
PKNOX1-204ENST00000456957 PLIN1O60240 522 aa20.61■□□□□ 0.89
PKNOX1-204ENST00000456957 TRIM27P14373 513 aa20.61■□□□□ 0.89
PKNOX1-204ENST00000456957 PI4KAP1Q8N8J0 262 aa20.61■□□□□ 0.89
PKNOX1-204ENST00000456957 TNNQ9UQP3 1299 aa20.61■□□□□ 0.89
PKNOX1-204ENST00000456957 MAP3K2Q9Y2U5 619 aa20.61■□□□□ 0.89
PKNOX1-204ENST00000456957 PXDNLA1KZ92 1463 aa20.61■□□□□ 0.89
PKNOX1-204ENST00000456957 ERVV-1B6SEH8 477 aa20.6■□□□□ 0.89
PKNOX1-204ENST00000456957 F6X3S4 739 aa20.6■□□□□ 0.89
PKNOX1-204ENST00000456957 RRP1P56182 461 aaKnown RBP20.6■□□□□ 0.89
PKNOX1-204ENST00000456957 HLFQ16534 295 aa20.6■□□□□ 0.89
PKNOX1-204ENST00000456957 USPL1Q5W0Q7 1092 aa20.6■□□□□ 0.89
PKNOX1-204ENST00000456957 ATF7IPQ6VMQ6 1270 aa20.6■□□□□ 0.89
PKNOX1-204ENST00000456957 RIC3Q7Z5B4 369 aa20.6■□□□□ 0.89
PKNOX1-204ENST00000456957 API5Q9BZZ5 524 aaKnown RBP20.6■□□□□ 0.89
PKNOX1-204ENST00000456957 COL24A1Q17RW2 1714 aa20.6■□□□□ 0.89
PKNOX1-204ENST00000456957 RNF123Q5XPI4 1314 aa20.59■□□□□ 0.89
PKNOX1-204ENST00000456957 ZPR1O75312 459 aa20.59■□□□□ 0.89
PKNOX1-204ENST00000456957 BCL2L12Q9HB09 334 aa20.59■□□□□ 0.89
PKNOX1-204ENST00000456957 SUPT16HQ9Y5B9 1047 aaKnown RBP20.59■□□□□ 0.89
PKNOX1-204ENST00000456957 MSH5O43196 834 aa20.58■□□□□ 0.89
PKNOX1-204ENST00000456957 DNAAF4Q8WXU2 420 aa20.58■□□□□ 0.89
PKNOX1-204ENST00000456957 ABCC4O15439 1325 aa20.57■□□□□ 0.88
PKNOX1-204ENST00000456957 R3HDM1Q15032 1099 aaKnown RBP20.57■□□□□ 0.88
PKNOX1-204ENST00000456957 GIGYF2Q6Y7W6 1299 aaKnown RBP20.57■□□□□ 0.88
PKNOX1-204ENST00000456957 GOLGA6L2Q8N9W4 650 aaPredicted RBP20.57■□□□□ 0.88
PKNOX1-204ENST00000456957 METTL22Q9BUU2 404 aaPredicted RBP20.57■□□□□ 0.88
PKNOX1-204ENST00000456957 PDGFDQ9GZP0 370 aaPredicted RBP20.57■□□□□ 0.88
PKNOX1-204ENST00000456957 ATP10DQ9P241 1426 aa20.57■□□□□ 0.88
PKNOX1-204ENST00000456957 RGL2O15211 777 aa20.56■□□□□ 0.88
PKNOX1-204ENST00000456957 GYS1P13807 737 aa20.56■□□□□ 0.88
PKNOX1-204ENST00000456957 CLUAP1Q96AJ1 413 aa20.56■□□□□ 0.88
PKNOX1-204ENST00000456957 ZNF652Q9Y2D9 606 aa20.56■□□□□ 0.88
PKNOX1-204ENST00000456957 SLC4A10Q6U841 1118 aa20.55■□□□□ 0.88
PKNOX1-204ENST00000456957 MYD88Q99836 296 aa20.55■□□□□ 0.88
PKNOX1-204ENST00000456957 RLBP1P12271 317 aa20.54■□□□□ 0.88
PKNOX1-204ENST00000456957 TCIRG1Q13488 830 aa20.54■□□□□ 0.88
PKNOX1-204ENST00000456957 FKBP8Q14318 412 aa20.54■□□□□ 0.88
PKNOX1-204ENST00000456957 C20orf194Q5TEA3 1177 aa20.54■□□□□ 0.88
PKNOX1-204ENST00000456957 CLEC4GQ6UXB4 293 aa20.54■□□□□ 0.88
PKNOX1-204ENST00000456957 HSP90AB3PQ58FF7 597 aa20.53■□□□□ 0.88
PKNOX1-204ENST00000456957 BEND3Q5T5X7 828 aa20.53■□□□□ 0.88
PKNOX1-204ENST00000456957 FTSJ3Q8IY81 847 aaKnown RBP20.53■□□□□ 0.88
PKNOX1-204ENST00000456957 DZIP1LQ8IYY4 767 aaKnown RBP20.53■□□□□ 0.88
PKNOX1-204ENST00000456957 PANK1Q8TE04 598 aa20.53■□□□□ 0.88
PKNOX1-204ENST00000456957 ATP5J2-PTCD1G3V325 749 aa20.52■□□□□ 0.88
PKNOX1-204ENST00000456957 IGKV5-2P06315 115 aa20.52■□□□□ 0.88
PKNOX1-204ENST00000456957 NEXNQ0ZGT2 675 aa20.52■□□□□ 0.88
PKNOX1-204ENST00000456957 TBC1D9BQ66K14 1250 aa20.52■□□□□ 0.88
PKNOX1-204ENST00000456957 ZNF34Q8IZ26 560 aa20.52■□□□□ 0.88
PKNOX1-204ENST00000456957 ISCA1Q9BUE6 129 aa20.52■□□□□ 0.88
PKNOX1-204ENST00000456957 UBN2Q6ZU65 1347 aa20.52■□□□□ 0.87
PKNOX1-204ENST00000456957 MS4A1P11836 297 aa20.51■□□□□ 0.87
PKNOX1-204ENST00000456957 GPTP24298 496 aa20.51■□□□□ 0.87
PKNOX1-204ENST00000456957 CWF19L2Q2TBE0 894 aaKnown RBP20.51■□□□□ 0.87
PKNOX1-204ENST00000456957 TMEM57Q8N5G2 664 aa20.51■□□□□ 0.87
PKNOX1-204ENST00000456957 LINS1Q8NG48 757 aa20.51■□□□□ 0.87
PKNOX1-204ENST00000456957 NRXN2Q9P2S2 1712 aa20.5■□□□□ 0.87
PKNOX1-204ENST00000456957 LAMB2P55268 1798 aa20.5■□□□□ 0.87
PKNOX1-204ENST00000456957 CCT4P50991 539 aaKnown RBP20.5■□□□□ 0.87
PKNOX1-204ENST00000456957 PDE3AQ14432 1141 aa20.5■□□□□ 0.87
PKNOX1-204ENST00000456957 MSL1Q68DK7 614 aa20.5■□□□□ 0.87
PKNOX1-204ENST00000456957 INTS3Q68E01 1043 aaKnown RBP20.5■□□□□ 0.87
PKNOX1-204ENST00000456957 BICDL1Q6ZP65 573 aa20.5■□□□□ 0.87
PKNOX1-204ENST00000456957 SRCIN1Q9C0H9 1055 aa20.5■□□□□ 0.87
PKNOX1-204ENST00000456957 NIP7Q9Y221 180 aaKnown RBP eCLIP20.5■□□□□ 0.87
PKNOX1-204ENST00000456957 NEURL1BA8MQ27 555 aa20.49■□□□□ 0.87
PKNOX1-204ENST00000456957 NFIXQ14938 502 aa20.49■□□□□ 0.87
PKNOX1-204ENST00000456957 SLC16A10Q8TF71 515 aa20.49■□□□□ 0.87
PKNOX1-204ENST00000456957 LRP5O75197 1615 aa20.49■□□□□ 0.87
PKNOX1-204ENST00000456957 ALDH1L1O75891 902 aa20.48■□□□□ 0.87
PKNOX1-204ENST00000456957 TRIM28Q13263 835 aaKnown RBP20.48■□□□□ 0.87
PKNOX1-204ENST00000456957 NLRP10Q86W26 655 aa20.48■□□□□ 0.87
PKNOX1-204ENST00000456957 NLGN1Q8N2Q7 840 aa20.48■□□□□ 0.87
PKNOX1-204ENST00000456957 CARMIL3Q8ND23 1372 aa20.47■□□□□ 0.87
PKNOX1-204ENST00000456957 DDX60Q8IY21 1712 aaKnown RBP20.47■□□□□ 0.87
PKNOX1-204ENST00000456957 TM4SF1P30408 202 aa20.47■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms