RNA–Protein interactions for RNA: ENST00000456506.2

LMCD1-206, Transcript of LIM and cysteine rich domains 1, humanhuman

TSL 2

Gene LMCD1, Length 1,059 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMCD1-206ENST00000456506 PRKAR2BP31323 418 aa16.01■□□□□ 0.15
LMCD1-206ENST00000456506 STYK1Q6J9G0 422 aa16.01■□□□□ 0.15
LMCD1-206ENST00000456506 C7orf43Q8WVR3 580 aa16.01■□□□□ 0.15
LMCD1-206ENST00000456506 PIP4K2AP48426 406 aaPredicted RBP16■□□□□ 0.15
LMCD1-206ENST00000456506 PRPF40BQ6NWY9 871 aaKnown RBP16■□□□□ 0.15
LMCD1-206ENST00000456506 CNBD1Q8NA66 436 aa16■□□□□ 0.15
LMCD1-206ENST00000456506 SETDB2Q96T68 719 aa16■□□□□ 0.15
LMCD1-206ENST00000456506 ZNF219Q9P2Y4 722 aaPredicted RBP16■□□□□ 0.15
LMCD1-206ENST00000456506 ZNF330Q9Y3S2 320 aaPredicted RBP16■□□□□ 0.15
LMCD1-206ENST00000456506 LAMB2P55268 1798 aa16■□□□□ 0.15
LMCD1-206ENST00000456506 LTBP1Q14766 1721 aa15.99■□□□□ 0.15
LMCD1-206ENST00000456506 KLRG2A4D1S0 409 aaPredicted RBP15.99■□□□□ 0.15
LMCD1-206ENST00000456506 NBPF26B4DH59 902 aa15.99■□□□□ 0.15
LMCD1-206ENST00000456506 ERFEQ4G0M1 354 aa15.99■□□□□ 0.15
LMCD1-206ENST00000456506 NBPF10Q6P3W6 841 aaKnown RBP15.99■□□□□ 0.15
LMCD1-206ENST00000456506 DZIP3Q86Y13 1208 aaKnown RBP15.99■□□□□ 0.15
LMCD1-206ENST00000456506 NBPF15Q8N660 670 aa15.99■□□□□ 0.15
LMCD1-206ENST00000456506 ANKRD36CQ5JPF3 1778 aa15.99■□□□□ 0.15
LMCD1-206ENST00000456506 POTEIP0CG38 1075 aa15.98■□□□□ 0.15
LMCD1-206ENST00000456506 POTEJP0CG39 1038 aa15.98■□□□□ 0.15
LMCD1-206ENST00000456506 CNKSR1Q969H4 720 aa15.98■□□□□ 0.15
LMCD1-206ENST00000456506 MASTLQ96GX5 879 aa15.98■□□□□ 0.15
LMCD1-206ENST00000456506 TAOK3Q9H2K8 898 aa15.98■□□□□ 0.15
LMCD1-206ENST00000456506 DDNO94850 711 aaPredicted RBP15.97■□□□□ 0.15
LMCD1-206ENST00000456506 CNGB1Q14028 1251 aaPredicted RBP15.97■□□□□ 0.15
LMCD1-206ENST00000456506 DPY19L2Q6NUT2 758 aa15.97■□□□□ 0.15
LMCD1-206ENST00000456506 CLEC4GQ6UXB4 293 aa15.97■□□□□ 0.15
LMCD1-206ENST00000456506 COL4A5P29400 1685 aa15.97■□□□□ 0.15
LMCD1-206ENST00000456506 RGL2O15211 777 aa15.96■□□□□ 0.15
LMCD1-206ENST00000456506 HSPA1AP0DMV8 641 aaKnown RBP15.96■□□□□ 0.15
LMCD1-206ENST00000456506 HSPA1BP0DMV9 641 aaKnown RBP15.96■□□□□ 0.15
LMCD1-206ENST00000456506 ST5P78524 1137 aa15.96■□□□□ 0.15
LMCD1-206ENST00000456506 MCM10Q7L590 875 aa15.96■□□□□ 0.15
LMCD1-206ENST00000456506 TRPM7Q96QT4 1865 aa15.95■□□□□ 0.14
LMCD1-206ENST00000456506 SNRPA1P09661 255 aaKnown RBP15.95■□□□□ 0.14
LMCD1-206ENST00000456506 PPP2R1AP30153 589 aa15.95■□□□□ 0.14
LMCD1-206ENST00000456506 PASKQ96RG2 1323 aa15.94■□□□□ 0.14
LMCD1-206ENST00000456506 THSD7BQ9C0I4 1608 aa15.94■□□□□ 0.14
LMCD1-206ENST00000456506 DCTN1Q14203 1278 aa15.94■□□□□ 0.14
LMCD1-206ENST00000456506 SOGA3Q5TF21 947 aa15.94■□□□□ 0.14
LMCD1-206ENST00000456506 CHADLQ6NUI6 762 aa15.94■□□□□ 0.14
LMCD1-206ENST00000456506 L3MBTL3Q96JM7 780 aaPredicted RBP15.94■□□□□ 0.14
LMCD1-206ENST00000456506 OLFM4Q6UX06 510 aa15.93■□□□□ 0.14
LMCD1-206ENST00000456506 CFAP53Q96M91 514 aa15.93■□□□□ 0.14
LMCD1-206ENST00000456506 CREBZFQ9NS37 354 aa15.93■□□□□ 0.14
LMCD1-206ENST00000456506 HTATSF1O43719 755 aaKnown RBP15.92■□□□□ 0.14
LMCD1-206ENST00000456506 NPR1P16066 1061 aa15.92■□□□□ 0.14
LMCD1-206ENST00000456506 HLFQ16534 295 aa15.92■□□□□ 0.14
LMCD1-206ENST00000456506 NBPF5PQ86XG9 351 aaPredicted RBP15.92■□□□□ 0.14
LMCD1-206ENST00000456506 RIC1Q4ADV7 1423 aa15.92■□□□□ 0.14
LMCD1-206ENST00000456506 ZNF541Q9H0D2 1346 aa15.92■□□□□ 0.14
LMCD1-206ENST00000456506 TAF1P21675 1872 aa15.91■□□□□ 0.14
LMCD1-206ENST00000456506 ABCC12Q96J65 1359 aa15.91■□□□□ 0.14
LMCD1-206ENST00000456506 U2AF1L5P0DN76 240 aaPredicted RBP15.91■□□□□ 0.14
LMCD1-206ENST00000456506 U2AF1Q01081 240 aaKnown RBP eCLIP15.91■□□□□ 0.14
LMCD1-206ENST00000456506 CCDC93Q567U6 631 aa15.91■□□□□ 0.14
LMCD1-206ENST00000456506 TNS4Q8IZW8 715 aa15.91■□□□□ 0.14
LMCD1-206ENST00000456506 TAF1DQ9H5J8 278 aaPredicted RBP15.91■□□□□ 0.14
LMCD1-206ENST00000456506 ZNF652Q9Y2D9 606 aa15.91■□□□□ 0.14
LMCD1-206ENST00000456506 CNTNAP1P78357 1384 aa15.9■□□□□ 0.14
LMCD1-206ENST00000456506 ITGBL1O95965 494 aaPredicted RBP15.9■□□□□ 0.14
LMCD1-206ENST00000456506 FKBP4Q02790 459 aaKnown RBP eCLIP15.9■□□□□ 0.14
LMCD1-206ENST00000456506 NIP7Q9Y221 180 aaKnown RBP eCLIP15.9■□□□□ 0.14
LMCD1-206ENST00000456506 CRY2Q49AN0 593 aa15.89■□□□□ 0.13
LMCD1-206ENST00000456506 TPTE2Q6XPS3 522 aa15.89■□□□□ 0.13
LMCD1-206ENST00000456506 NPM2Q86SE8 214 aaKnown RBP15.89■□□□□ 0.13
LMCD1-206ENST00000456506 LDHDQ86WU2 507 aa15.89■□□□□ 0.13
LMCD1-206ENST00000456506 RTF1Q92541 710 aaKnown RBP15.89■□□□□ 0.13
LMCD1-206ENST00000456506 NUDCQ9Y266 331 aa15.89■□□□□ 0.13
LMCD1-206ENST00000456506 NPHP1O15259 732 aa15.88■□□□□ 0.13
LMCD1-206ENST00000456506 TAF7Q15545 349 aaPredicted RBP15.88■□□□□ 0.13
LMCD1-206ENST00000456506 ZNF277Q9NRM2 450 aaPredicted RBP15.88■□□□□ 0.13
LMCD1-206ENST00000456506 MIS18AQ9NYP9 233 aa15.88■□□□□ 0.13
LMCD1-206ENST00000456506 MKRN1Q9UHC7 482 aaKnown RBP15.88■□□□□ 0.13
LMCD1-206ENST00000456506 IQCA1LA6NCM1 817 aa15.87■□□□□ 0.13
LMCD1-206ENST00000456506 FZD9O00144 591 aa15.87■□□□□ 0.13
LMCD1-206ENST00000456506 PLEKHF1Q96S99 279 aa15.87■□□□□ 0.13
LMCD1-206ENST00000456506 DDX60Q8IY21 1712 aaKnown RBP15.87■□□□□ 0.13
LMCD1-206ENST00000456506 IBTKQ9P2D0 1353 aaPredicted RBP15.87■□□□□ 0.13
LMCD1-206ENST00000456506 LRRC37AA6NMS7 1700 aa15.86■□□□□ 0.13
LMCD1-206ENST00000456506 SLC51AQ86UW1 340 aa15.86■□□□□ 0.13
LMCD1-206ENST00000456506 RTKN2Q8IZC4 609 aa15.86■□□□□ 0.13
LMCD1-206ENST00000456506 UBN2Q6ZU65 1347 aa15.86■□□□□ 0.13
LMCD1-206ENST00000456506 FAM177BA6PVY3 158 aa15.85■□□□□ 0.13
LMCD1-206ENST00000456506 ERVV-1B6SEH8 477 aa15.85■□□□□ 0.13
LMCD1-206ENST00000456506 CAPN15O75808 1086 aa15.85■□□□□ 0.13
LMCD1-206ENST00000456506 IARSP41252 1262 aaKnown RBP15.85■□□□□ 0.13
LMCD1-206ENST00000456506 ALDH1B1P30837 517 aa15.84■□□□□ 0.13
LMCD1-206ENST00000456506 HOXA10P31260 410 aaPredicted RBP15.84■□□□□ 0.13
LMCD1-206ENST00000456506 EIF4A1P60842 406 aaKnown RBP15.84■□□□□ 0.13
LMCD1-206ENST00000456506 TTLL7Q6ZT98 887 aa15.84■□□□□ 0.13
LMCD1-206ENST00000456506 NUTM1Q86Y26 1132 aa15.84■□□□□ 0.13
LMCD1-206ENST00000456506 SYNE4Q8N205 404 aa15.84■□□□□ 0.13
LMCD1-206ENST00000456506 PSMD1Q99460 953 aa15.84■□□□□ 0.13
LMCD1-206ENST00000456506 MAP3K15Q6ZN16 1313 aa15.84■□□□□ 0.13
LMCD1-206ENST00000456506 FOXN1O15353 648 aa15.83■□□□□ 0.12
LMCD1-206ENST00000456506 EPHX2P34913 555 aa15.83■□□□□ 0.12
LMCD1-206ENST00000456506 LRP10Q7Z4F1 713 aa15.83■□□□□ 0.12
LMCD1-206ENST00000456506 HACL1Q9UJ83 578 aa15.83■□□□□ 0.12
LMCD1-206ENST00000456506 RNF123Q5XPI4 1314 aa15.83■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 49.6 ms