RNA–Protein interactions for RNA: ENST00000456222.1

SEC22C-213, Transcript of SEC22 homolog C, vesicle trafficking protein, humanhuman

TSL 4

Gene SEC22C, Length 558 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC22C-213ENST00000456222 HLFQ16534 295 aa28.76■■■□□ 2.19
SEC22C-213ENST00000456222 TIAM2Q8IVF5 1701 aa28.76■■■□□ 2.19
SEC22C-213ENST00000456222 TOMM70O94826 608 aa28.75■■■□□ 2.19
SEC22C-213ENST00000456222 LMNB1P20700 586 aa28.75■■■□□ 2.19
SEC22C-213ENST00000456222 PNISRQ8TF01 805 aaKnown RBP28.75■■■□□ 2.19
SEC22C-213ENST00000456222 NPHP1O15259 732 aa28.74■■■□□ 2.19
SEC22C-213ENST00000456222 C21orf2O43822 256 aa28.74■■■□□ 2.19
SEC22C-213ENST00000456222 ST5P78524 1137 aa28.74■■■□□ 2.19
SEC22C-213ENST00000456222 NBPF5PQ86XG9 351 aaPredicted RBP28.74■■■□□ 2.19
SEC22C-213ENST00000456222 ARFGEF2Q9Y6D5 1785 aa28.74■■■□□ 2.19
SEC22C-213ENST00000456222 SRGNP10124 158 aa28.73■■■□□ 2.19
SEC22C-213ENST00000456222 NGEFQ8N5V2 710 aa28.73■■■□□ 2.19
SEC22C-213ENST00000456222 PDZRN3Q9UPQ7 1066 aa28.73■■■□□ 2.19
SEC22C-213ENST00000456222 NIP7Q9Y221 180 aaKnown RBP eCLIP28.73■■■□□ 2.19
SEC22C-213ENST00000456222 ZNF652Q9Y2D9 606 aa28.73■■■□□ 2.19
SEC22C-213ENST00000456222 NUP98P52948 1817 aa28.73■■■□□ 2.19
SEC22C-213ENST00000456222 TNRC6CQ9HCJ0 1690 aaKnown RBP28.73■■■□□ 2.19
SEC22C-213ENST00000456222 PNNQ9H307 717 aaKnown RBP28.72■■■□□ 2.19
SEC22C-213ENST00000456222 RRAGCQ9HB90 399 aa28.72■■■□□ 2.19
SEC22C-213ENST00000456222 KDM2BQ8NHM5 1336 aa28.71■■■□□ 2.19
SEC22C-213ENST00000456222 FAM177BA6PVY3 158 aa28.71■■■□□ 2.19
SEC22C-213ENST00000456222 RIPK4P57078 832 aa28.7■■■□□ 2.18
SEC22C-213ENST00000456222 TTLL7Q6ZT98 887 aa28.7■■■□□ 2.18
SEC22C-213ENST00000456222 RRP7AQ9Y3A4 280 aaKnown RBP28.7■■■□□ 2.18
SEC22C-213ENST00000456222 DICER1Q9UPY3 1922 aaKnown RBP28.7■■■□□ 2.18
SEC22C-213ENST00000456222 MYBBP1AQ9BQG0 1328 aaKnown RBP28.69■■■□□ 2.18
SEC22C-213ENST00000456222 STYK1Q6J9G0 422 aa28.69■■■□□ 2.18
SEC22C-213ENST00000456222 PRPF40BQ6NWY9 871 aaKnown RBP28.69■■■□□ 2.18
SEC22C-213ENST00000456222 RGL2O15211 777 aa28.68■■■□□ 2.18
SEC22C-213ENST00000456222 TMPOP42166 694 aaKnown RBP28.68■■■□□ 2.18
SEC22C-213ENST00000456222 CCDC146Q8IYE0 955 aa28.68■■■□□ 2.18
SEC22C-213ENST00000456222 ZC3H4Q9UPT8 1303 aaKnown RBP28.68■■■□□ 2.18
SEC22C-213ENST00000456222 MYL6BP14649 208 aa28.67■■■□□ 2.18
SEC22C-213ENST00000456222 CNKSR1Q969H4 720 aa28.67■■■□□ 2.18
SEC22C-213ENST00000456222 MASTLQ96GX5 879 aa28.67■■■□□ 2.18
SEC22C-213ENST00000456222 TSPYL4Q9UJ04 414 aa28.67■■■□□ 2.18
SEC22C-213ENST00000456222 RBM46Q8TBY0 533 aaKnown RBP28.66■■■□□ 2.18
SEC22C-213ENST00000456222 KLRG2A4D1S0 409 aaPredicted RBP28.65■■■□□ 2.18
SEC22C-213ENST00000456222 TPTE2Q6XPS3 522 aa28.65■■■□□ 2.18
SEC22C-213ENST00000456222 MAP3K15Q6ZN16 1313 aa28.65■■■□□ 2.18
SEC22C-213ENST00000456222 GLTPD2A6NH11 291 aa28.64■■■□□ 2.18
SEC22C-213ENST00000456222 ABCC12Q96J65 1359 aa28.63■■■□□ 2.17
SEC22C-213ENST00000456222 C16orf71Q8IYS4 520 aaPredicted RBP28.63■■■□□ 2.17
SEC22C-213ENST00000456222 C7orf43Q8WVR3 580 aa28.63■■■□□ 2.17
SEC22C-213ENST00000456222 ERVV-1B6SEH8 477 aa28.62■■■□□ 2.17
SEC22C-213ENST00000456222 LRP10Q7Z4F1 713 aa28.62■■■□□ 2.17
SEC22C-213ENST00000456222 ZBTB3Q9H5J0 574 aa28.62■■■□□ 2.17
SEC22C-213ENST00000456222 NPR1P16066 1061 aa28.61■■■□□ 2.17
SEC22C-213ENST00000456222 NEUROD2Q15784 382 aa28.61■■■□□ 2.17
SEC22C-213ENST00000456222 OLFM4Q6UX06 510 aa28.61■■■□□ 2.17
SEC22C-213ENST00000456222 NUTM1Q86Y26 1132 aa28.61■■■□□ 2.17
SEC22C-213ENST00000456222 TAOK3Q9H2K8 898 aa28.61■■■□□ 2.17
SEC22C-213ENST00000456222 UBN2Q6ZU65 1347 aa28.61■■■□□ 2.17
SEC22C-213ENST00000456222 LTBP3Q9NS15 1303 aa28.61■■■□□ 2.17
SEC22C-213ENST00000456222 GPTP24298 496 aa28.6■■■□□ 2.17
SEC22C-213ENST00000456222 PDIA6Q15084 440 aa28.6■■■□□ 2.17
SEC22C-213ENST00000456222 PROSER3Q2NL68 480 aa28.6■■■□□ 2.17
SEC22C-213ENST00000456222 ANXA1P04083 346 aa28.59■■■□□ 2.17
SEC22C-213ENST00000456222 APLP1P51693 650 aa28.59■■■□□ 2.17
SEC22C-213ENST00000456222 ERFEQ4G0M1 354 aa28.59■■■□□ 2.17
SEC22C-213ENST00000456222 KIF6Q6ZMV9 814 aa28.59■■■□□ 2.17
SEC22C-213ENST00000456222 WDR90Q96KV7 1748 aa28.59■■■□□ 2.17
SEC22C-213ENST00000456222 POTECB2RU33 542 aa28.58■■■□□ 2.17
SEC22C-213ENST00000456222 EIF2S2P20042 333 aaKnown RBP28.58■■■□□ 2.17
SEC22C-213ENST00000456222 HTRA3P83110 453 aa28.58■■■□□ 2.17
SEC22C-213ENST00000456222 TRIM35Q9UPQ4 493 aa28.58■■■□□ 2.17
SEC22C-213ENST00000456222 KRT24Q2M2I5 525 aa28.57■■■□□ 2.16
SEC22C-213ENST00000456222 ADAMTS8Q9UP79 889 aa28.57■■■□□ 2.16
SEC22C-213ENST00000456222 ERBB4Q15303 1308 aa28.57■■■□□ 2.16
SEC22C-213ENST00000456222 LMOD3Q0VAK6 560 aa28.56■■■□□ 2.16
SEC22C-213ENST00000456222 FSTL1Q12841 308 aa28.56■■■□□ 2.16
SEC22C-213ENST00000456222 DNAJC5GQ8N7S2 189 aa28.56■■■□□ 2.16
SEC22C-213ENST00000456222 PCNTO95613 3336 aa28.55■■■□□ 2.16
SEC22C-213ENST00000456222 VEGFAP15692 232 aaPredicted RBP28.55■■■□□ 2.16
SEC22C-213ENST00000456222 GTF2E1P29083 439 aaPredicted RBP28.55■■■□□ 2.16
SEC22C-213ENST00000456222 SUSD4Q5VX71 490 aa28.55■■■□□ 2.16
SEC22C-213ENST00000456222 ZNF34Q8IZ26 560 aa28.55■■■□□ 2.16
SEC22C-213ENST00000456222 RUNDC1Q96C34 613 aa28.55■■■□□ 2.16
SEC22C-213ENST00000456222 PRKRIP1Q9H875 184 aaPredicted RBP28.55■■■□□ 2.16
SEC22C-213ENST00000456222 BABAM1Q9NWV8 329 aa28.55■■■□□ 2.16
SEC22C-213ENST00000456222 WDR43Q15061 677 aaKnown RBP eCLIP28.54■■■□□ 2.16
SEC22C-213ENST00000456222 NECTIN2Q92692 538 aa28.54■■■□□ 2.16
SEC22C-213ENST00000456222 CRY2Q49AN0 593 aa28.53■■■□□ 2.16
SEC22C-213ENST00000456222 CCDC93Q567U6 631 aa28.53■■■□□ 2.16
SEC22C-213ENST00000456222 SOGA3Q5TF21 947 aa28.53■■■□□ 2.16
SEC22C-213ENST00000456222 GIGYF2Q6Y7W6 1299 aaKnown RBP28.53■■■□□ 2.16
SEC22C-213ENST00000456222 NYXQ9GZU5 481 aa28.53■■■□□ 2.16
SEC22C-213ENST00000456222 CHL1O00533 1208 aa28.52■■■□□ 2.16
SEC22C-213ENST00000456222 SLC51AQ86UW1 340 aa28.52■■■□□ 2.16
SEC22C-213ENST00000456222 IBTKQ9P2D0 1353 aaPredicted RBP28.51■■■□□ 2.16
SEC22C-213ENST00000456222 NTSR2O95665 410 aa28.51■■■□□ 2.15
SEC22C-213ENST00000456222 C3orf67Q6ZVT6 689 aa28.51■■■□□ 2.15
SEC22C-213ENST00000456222 SNED1Q8TER0 1413 aa28.51■■■□□ 2.15
SEC22C-213ENST00000456222 DDNO94850 711 aaPredicted RBP28.5■■■□□ 2.15
SEC22C-213ENST00000456222 SMC1BQ8NDV3 1235 aa28.5■■■□□ 2.15
SEC22C-213ENST00000456222 ZNF277Q9NRM2 450 aaPredicted RBP28.5■■■□□ 2.15
SEC22C-213ENST00000456222 LAS1LQ9Y4W2 734 aaKnown RBP28.5■■■□□ 2.15
SEC22C-213ENST00000456222 DPY19L2Q6NUT2 758 aa28.49■■■□□ 2.15
SEC22C-213ENST00000456222 RIC1Q4ADV7 1423 aa28.49■■■□□ 2.15
SEC22C-213ENST00000456222 ANKRD36CQ5JPF3 1778 aa28.49■■■□□ 2.15
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms