RNA–Protein interactions for RNA: ENST00000456090.2

SMCR2-201, Transcript of Smith-Magenis syndrome chromosome region, candidate 2, humanhuman

TSL 2 BASIC

Gene SMCR2, Length 564 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCR2-201ENST00000456090 CLEC4GQ6UXB4 293 aa16.37■□□□□ 0.21
SMCR2-201ENST00000456090 ZNF622Q969S3 477 aaKnown RBP eCLIP16.37■□□□□ 0.21
SMCR2-201ENST00000456090 ZNF652Q9Y2D9 606 aa16.37■□□□□ 0.21
SMCR2-201ENST00000456090 ST5P78524 1137 aa16.36■□□□□ 0.21
SMCR2-201ENST00000456090 NMRK2Q9NPI5 230 aa16.36■□□□□ 0.21
SMCR2-201ENST00000456090 PDZRN3Q9UPQ7 1066 aa16.36■□□□□ 0.21
SMCR2-201ENST00000456090 MYBBP1AQ9BQG0 1328 aaKnown RBP16.36■□□□□ 0.21
SMCR2-201ENST00000456090 EIF4A1P60842 406 aaKnown RBP16.35■□□□□ 0.21
SMCR2-201ENST00000456090 RIPK4P57078 832 aa16.34■□□□□ 0.21
SMCR2-201ENST00000456090 NBPF5PQ86XG9 351 aaPredicted RBP16.34■□□□□ 0.21
SMCR2-201ENST00000456090 LMNB1P20700 586 aa16.33■□□□□ 0.2
SMCR2-201ENST00000456090 PRELPP51888 382 aa16.33■□□□□ 0.2
SMCR2-201ENST00000456090 NGEFQ8N5V2 710 aa16.33■□□□□ 0.2
SMCR2-201ENST00000456090 ZNF219Q9P2Y4 722 aaPredicted RBP16.33■□□□□ 0.2
SMCR2-201ENST00000456090 NIP7Q9Y221 180 aaKnown RBP eCLIP16.33■□□□□ 0.2
SMCR2-201ENST00000456090 PCNTO95613 3336 aa16.32■□□□□ 0.2
SMCR2-201ENST00000456090 RGL2O15211 777 aa16.32■□□□□ 0.2
SMCR2-201ENST00000456090 TOMM70O94826 608 aa16.32■□□□□ 0.2
SMCR2-201ENST00000456090 HSPA6P17066 643 aa16.32■□□□□ 0.2
SMCR2-201ENST00000456090 HLFQ16534 295 aa16.32■□□□□ 0.2
SMCR2-201ENST00000456090 KDM2BQ8NHM5 1336 aa16.32■□□□□ 0.2
SMCR2-201ENST00000456090 TSPYL4Q9UJ04 414 aa16.32■□□□□ 0.2
SMCR2-201ENST00000456090 NFKBIEO00221 500 aa16.31■□□□□ 0.2
SMCR2-201ENST00000456090 C21orf2O43822 256 aa16.31■□□□□ 0.2
SMCR2-201ENST00000456090 SRGNP10124 158 aa16.31■□□□□ 0.2
SMCR2-201ENST00000456090 TMPOP42166 694 aaKnown RBP16.31■□□□□ 0.2
SMCR2-201ENST00000456090 CCDC146Q8IYE0 955 aa16.31■□□□□ 0.2
SMCR2-201ENST00000456090 RRP7AQ9Y3A4 280 aaKnown RBP16.31■□□□□ 0.2
SMCR2-201ENST00000456090 ZC3H4Q9UPT8 1303 aaKnown RBP16.3■□□□□ 0.2
SMCR2-201ENST00000456090 FAM177BA6PVY3 158 aa16.3■□□□□ 0.2
SMCR2-201ENST00000456090 MYL6BP14649 208 aa16.3■□□□□ 0.2
SMCR2-201ENST00000456090 STYK1Q6J9G0 422 aa16.3■□□□□ 0.2
SMCR2-201ENST00000456090 TPTE2Q6XPS3 522 aa16.3■□□□□ 0.2
SMCR2-201ENST00000456090 CNKSR1Q969H4 720 aa16.3■□□□□ 0.2
SMCR2-201ENST00000456090 MASTLQ96GX5 879 aa16.3■□□□□ 0.2
SMCR2-201ENST00000456090 LMOD3Q0VAK6 560 aa16.29■□□□□ 0.2
SMCR2-201ENST00000456090 WDR43Q15061 677 aaKnown RBP eCLIP16.29■□□□□ 0.2
SMCR2-201ENST00000456090 PRPF40BQ6NWY9 871 aaKnown RBP16.29■□□□□ 0.2
SMCR2-201ENST00000456090 KIF6Q6ZMV9 814 aa16.29■□□□□ 0.2
SMCR2-201ENST00000456090 C16orf71Q8IYS4 520 aaPredicted RBP16.29■□□□□ 0.2
SMCR2-201ENST00000456090 RRAGCQ9HB90 399 aa16.29■□□□□ 0.2
SMCR2-201ENST00000456090 MAP3K15Q6ZN16 1313 aa16.28■□□□□ 0.2
SMCR2-201ENST00000456090 ERVV-1B6SEH8 477 aa16.28■□□□□ 0.2
SMCR2-201ENST00000456090 NEUROD2Q15784 382 aa16.28■□□□□ 0.2
SMCR2-201ENST00000456090 TTLL7Q6ZT98 887 aa16.28■□□□□ 0.2
SMCR2-201ENST00000456090 ANKRD36CQ5JPF3 1778 aa16.28■□□□□ 0.2
SMCR2-201ENST00000456090 GTF2E1P29083 439 aaPredicted RBP16.27■□□□□ 0.2
SMCR2-201ENST00000456090 RUNDC1Q96C34 613 aa16.27■□□□□ 0.2
SMCR2-201ENST00000456090 ERBB4Q15303 1308 aa16.26■□□□□ 0.19
SMCR2-201ENST00000456090 WDR90Q96KV7 1748 aa16.26■□□□□ 0.19
SMCR2-201ENST00000456090 KLRG2A4D1S0 409 aaPredicted RBP16.26■□□□□ 0.19
SMCR2-201ENST00000456090 NPR1P16066 1061 aa16.26■□□□□ 0.19
SMCR2-201ENST00000456090 EIF2S2P20042 333 aaKnown RBP16.26■□□□□ 0.19
SMCR2-201ENST00000456090 RBM46Q8TBY0 533 aaKnown RBP16.26■□□□□ 0.19
SMCR2-201ENST00000456090 TAOK3Q9H2K8 898 aa16.26■□□□□ 0.19
SMCR2-201ENST00000456090 ZBTB3Q9H5J0 574 aa16.26■□□□□ 0.19
SMCR2-201ENST00000456090 PRKRIP1Q9H875 184 aaPredicted RBP16.26■□□□□ 0.19
SMCR2-201ENST00000456090 BABAM1Q9NWV8 329 aa16.26■□□□□ 0.19
SMCR2-201ENST00000456090 GLTPD2A6NH11 291 aa16.25■□□□□ 0.19
SMCR2-201ENST00000456090 SOGA3Q5TF21 947 aa16.25■□□□□ 0.19
SMCR2-201ENST00000456090 NUTM1Q86Y26 1132 aa16.25■□□□□ 0.19
SMCR2-201ENST00000456090 NYXQ9GZU5 481 aa16.25■□□□□ 0.19
SMCR2-201ENST00000456090 ADAMTS8Q9UP79 889 aa16.25■□□□□ 0.19
SMCR2-201ENST00000456090 LTBP3Q9NS15 1303 aa16.24■□□□□ 0.19
SMCR2-201ENST00000456090 GPTP24298 496 aa16.24■□□□□ 0.19
SMCR2-201ENST00000456090 ERFEQ4G0M1 354 aa16.24■□□□□ 0.19
SMCR2-201ENST00000456090 TRIM35Q9UPQ4 493 aa16.24■□□□□ 0.19
SMCR2-201ENST00000456090 ABCC12Q96J65 1359 aa16.24■□□□□ 0.19
SMCR2-201ENST00000456090 UBN2Q6ZU65 1347 aa16.23■□□□□ 0.19
SMCR2-201ENST00000456090 APLP1P51693 650 aa16.23■□□□□ 0.19
SMCR2-201ENST00000456090 PDIA6Q15084 440 aa16.23■□□□□ 0.19
SMCR2-201ENST00000456090 C7orf43Q8WVR3 580 aa16.23■□□□□ 0.19
SMCR2-201ENST00000456090 LAS1LQ9Y4W2 734 aaKnown RBP16.23■□□□□ 0.19
SMCR2-201ENST00000456090 ANXA1P04083 346 aa16.22■□□□□ 0.19
SMCR2-201ENST00000456090 PROSER3Q2NL68 480 aa16.22■□□□□ 0.19
SMCR2-201ENST00000456090 GIGYF2Q6Y7W6 1299 aaKnown RBP16.22■□□□□ 0.19
SMCR2-201ENST00000456090 LRP10Q7Z4F1 713 aa16.22■□□□□ 0.19
SMCR2-201ENST00000456090 NECTIN2Q92692 538 aa16.22■□□□□ 0.19
SMCR2-201ENST00000456090 LAMB2P55268 1798 aa16.22■□□□□ 0.19
SMCR2-201ENST00000456090 CHL1O00533 1208 aa16.21■□□□□ 0.19
SMCR2-201ENST00000456090 VEGFAP15692 232 aaPredicted RBP16.21■□□□□ 0.19
SMCR2-201ENST00000456090 ALDH1B1P30837 517 aa16.21■□□□□ 0.19
SMCR2-201ENST00000456090 FSTL1Q12841 308 aa16.21■□□□□ 0.19
SMCR2-201ENST00000456090 CCDC93Q567U6 631 aa16.21■□□□□ 0.19
SMCR2-201ENST00000456090 SUSD4Q5VX71 490 aa16.21■□□□□ 0.19
SMCR2-201ENST00000456090 DPY19L2Q6NUT2 758 aa16.21■□□□□ 0.19
SMCR2-201ENST00000456090 OLFM4Q6UX06 510 aa16.21■□□□□ 0.19
SMCR2-201ENST00000456090 ZNF34Q8IZ26 560 aa16.21■□□□□ 0.19
SMCR2-201ENST00000456090 IBTKQ9P2D0 1353 aaPredicted RBP16.21■□□□□ 0.19
SMCR2-201ENST00000456090 KRT24Q2M2I5 525 aa16.2■□□□□ 0.18
SMCR2-201ENST00000456090 CRY2Q49AN0 593 aa16.2■□□□□ 0.18
SMCR2-201ENST00000456090 RIC1Q4ADV7 1423 aa16.19■□□□□ 0.18
SMCR2-201ENST00000456090 SCN4AP35499 1836 aa16.19■□□□□ 0.18
SMCR2-201ENST00000456090 NTSR2O95665 410 aa16.18■□□□□ 0.18
SMCR2-201ENST00000456090 AIMP1Q12904 312 aaKnown RBP16.18■□□□□ 0.18
SMCR2-201ENST00000456090 COPS6Q7L5N1 327 aa16.18■□□□□ 0.18
SMCR2-201ENST00000456090 PPP1R42Q7Z4L9 355 aa16.18■□□□□ 0.18
SMCR2-201ENST00000456090 SMC1BQ8NDV3 1235 aa16.18■□□□□ 0.18
SMCR2-201ENST00000456090 RPGRQ92834 1020 aaKnown RBP16.18■□□□□ 0.18
SMCR2-201ENST00000456090 ZNF277Q9NRM2 450 aaPredicted RBP16.18■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms