RNA–Protein interactions for RNA: ENST00000456075.5

TOP3B-212, Transcript of DNA topoisomerase III beta, humanhuman

TSL 4

Gene TOP3B, Length 561 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3B-212ENST00000456075 NBPF5PQ86XG9 351 aaPredicted RBP13.38□□□□□ -0.27
TOP3B-212ENST00000456075 WDR63Q8IWG1 891 aa13.38□□□□□ -0.27
TOP3B-212ENST00000456075 CNBD1Q8NA66 436 aa13.38□□□□□ -0.27
TOP3B-212ENST00000456075 TSR2Q969E8 191 aaKnown RBP13.38□□□□□ -0.27
TOP3B-212ENST00000456075 ZBTB3Q9H5J0 574 aa13.38□□□□□ -0.27
TOP3B-212ENST00000456075 DDX21Q9NR30 783 aaKnown RBP eCLIP13.38□□□□□ -0.27
TOP3B-212ENST00000456075 DBF4Q9UBU7 674 aaPredicted RBP13.38□□□□□ -0.27
TOP3B-212ENST00000456075 NIP7Q9Y221 180 aaKnown RBP eCLIP13.38□□□□□ -0.27
TOP3B-212ENST00000456075 MAP3K15Q6ZN16 1313 aa13.38□□□□□ -0.27
TOP3B-212ENST00000456075 A0A0G2JLW4 131 aa13.37□□□□□ -0.27
TOP3B-212ENST00000456075 ERVV-1B6SEH8 477 aa13.37□□□□□ -0.27
TOP3B-212ENST00000456075 ANXA1P04083 346 aa13.37□□□□□ -0.27
TOP3B-212ENST00000456075 GTF2E1P29083 439 aaPredicted RBP13.37□□□□□ -0.27
TOP3B-212ENST00000456075 AIMP1Q12904 312 aaKnown RBP13.37□□□□□ -0.27
TOP3B-212ENST00000456075 TTLL7Q6ZT98 887 aa13.37□□□□□ -0.27
TOP3B-212ENST00000456075 CHPF2Q9P2E5 772 aa13.37□□□□□ -0.27
TOP3B-212ENST00000456075 PXDNLA1KZ92 1463 aa13.36□□□□□ -0.27
TOP3B-212ENST00000456075 BCORQ6W2J9 1755 aa13.36□□□□□ -0.27
TOP3B-212ENST00000456075 UTRNP46939 3433 aa13.36□□□□□ -0.27
TOP3B-212ENST00000456075 FAM177BA6PVY3 158 aa13.36□□□□□ -0.27
TOP3B-212ENST00000456075 DPEP1P16444 411 aa13.36□□□□□ -0.27
TOP3B-212ENST00000456075 PROSER3Q2NL68 480 aa13.36□□□□□ -0.27
TOP3B-212ENST00000456075 MYH16Q9H6N6 1097 aa13.36□□□□□ -0.27
TOP3B-212ENST00000456075 PDIA6Q15084 440 aa13.35□□□□□ -0.27
TOP3B-212ENST00000456075 HLFQ16534 295 aa13.35□□□□□ -0.27
TOP3B-212ENST00000456075 CCDC30Q5VVM6 783 aa13.35□□□□□ -0.27
TOP3B-212ENST00000456075 TPTE2Q6XPS3 522 aa13.35□□□□□ -0.27
TOP3B-212ENST00000456075 COPS6Q7L5N1 327 aa13.35□□□□□ -0.27
TOP3B-212ENST00000456075 C8orf58Q8NAV2 365 aa13.35□□□□□ -0.27
TOP3B-212ENST00000456075 XAGE3Q8WTP9 111 aa13.35□□□□□ -0.27
TOP3B-212ENST00000456075 HYPKQ9NX55 129 aa13.35□□□□□ -0.27
TOP3B-212ENST00000456075 PIM2Q9P1W9 311 aa13.35□□□□□ -0.27
TOP3B-212ENST00000456075 BCS1LQ9Y276 419 aa13.35□□□□□ -0.27
TOP3B-212ENST00000456075 H0YIN7 160 aa13.34□□□□□ -0.27
TOP3B-212ENST00000456075 YBX3P16989 372 aaKnown RBP eCLIP13.34□□□□□ -0.27
TOP3B-212ENST00000456075 GPTP24298 496 aa13.34□□□□□ -0.27
TOP3B-212ENST00000456075 PDE6BP35913 854 aa13.34□□□□□ -0.27
TOP3B-212ENST00000456075 GOLGA2Q08379 1002 aa13.34□□□□□ -0.27
TOP3B-212ENST00000456075 HSP90AB3PQ58FF7 597 aa13.34□□□□□ -0.27
TOP3B-212ENST00000456075 PRR5LQ6MZQ0 368 aa13.34□□□□□ -0.27
TOP3B-212ENST00000456075 BRIP1Q9BX63 1249 aa13.34□□□□□ -0.27
TOP3B-212ENST00000456075 STK31Q9BXU1 1019 aa13.34□□□□□ -0.27
TOP3B-212ENST00000456075 NYXQ9GZU5 481 aa13.34□□□□□ -0.27
TOP3B-212ENST00000456075 FANCIQ9NVI1 1328 aa13.34□□□□□ -0.27
TOP3B-212ENST00000456075 KIF13BQ9NQT8 1826 aa13.34□□□□□ -0.27
TOP3B-212ENST00000456075 YY1P25490 414 aa13.33□□□□□ -0.28
TOP3B-212ENST00000456075 CHRNA5P30532 468 aa13.33□□□□□ -0.28
TOP3B-212ENST00000456075 TWISTNBQ3B726 338 aaPredicted RBP13.33□□□□□ -0.28
TOP3B-212ENST00000456075 DALRD3Q5D0E6 543 aaKnown RBP13.33□□□□□ -0.28
TOP3B-212ENST00000456075 GIGYF2Q6Y7W6 1299 aaKnown RBP13.33□□□□□ -0.28
TOP3B-212ENST00000456075 C2CD5Q86YS7 1000 aa13.33□□□□□ -0.28
TOP3B-212ENST00000456075 MIER1Q8N108 512 aa13.33□□□□□ -0.28
TOP3B-212ENST00000456075 CCDC24Q8N4L8 307 aa13.33□□□□□ -0.28
TOP3B-212ENST00000456075 PDZRN3Q9UPQ7 1066 aa13.33□□□□□ -0.28
TOP3B-212ENST00000456075 ATP10DQ9P241 1426 aa13.32□□□□□ -0.28
TOP3B-212ENST00000456075 AFDNP55196 1824 aaKnown RBP13.32□□□□□ -0.28
TOP3B-212ENST00000456075 NRXN2Q9P2S2 1712 aa13.31□□□□□ -0.28
TOP3B-212ENST00000456075 N4BP2Q86UW6 1770 aaPredicted RBP13.31□□□□□ -0.28
TOP3B-212ENST00000456075 DDX58O95786 925 aaKnown RBP13.31□□□□□ -0.28
TOP3B-212ENST00000456075 PARP10Q53GL7 1025 aa13.31□□□□□ -0.28
TOP3B-212ENST00000456075 ANKRD13DQ6ZTN6 518 aa13.31□□□□□ -0.28
TOP3B-212ENST00000456075 LRP10Q7Z4F1 713 aa13.31□□□□□ -0.28
TOP3B-212ENST00000456075 PPP1R42Q7Z4L9 355 aa13.31□□□□□ -0.28
TOP3B-212ENST00000456075 TSPYL6Q8N831 410 aa13.31□□□□□ -0.28
TOP3B-212ENST00000456075 ZNF622Q969S3 477 aaKnown RBP eCLIP13.31□□□□□ -0.287e-13■■□□□ 12.8
TOP3B-212ENST00000456075 RIC3Q7Z5B4 369 aa13.3□□□□□ -0.28
TOP3B-212ENST00000456075 PLBD2Q8NHP8 589 aa13.3□□□□□ -0.28
TOP3B-212ENST00000456075 KCNA3P22001 575 aa13.29□□□□□ -0.28
TOP3B-212ENST00000456075 EXOSC9Q06265 439 aaKnown RBP13.29□□□□□ -0.28
TOP3B-212ENST00000456075 ARHGAP27Q6ZUM4 889 aa13.29□□□□□ -0.28
TOP3B-212ENST00000456075 ZNF34Q8IZ26 560 aa13.29□□□□□ -0.28
TOP3B-212ENST00000456075 TTLL6Q8N841 843 aa13.29□□□□□ -0.28
TOP3B-212ENST00000456075 E9PSI1 815 aa13.28□□□□□ -0.28
TOP3B-212ENST00000456075 TCERG1O14776 1098 aaKnown RBP13.28□□□□□ -0.28
TOP3B-212ENST00000456075 TCIRG1Q13488 830 aa13.28□□□□□ -0.28
TOP3B-212ENST00000456075 NUTM1Q86Y26 1132 aa13.28□□□□□ -0.28
TOP3B-212ENST00000456075 UTP14AQ9BVJ6 771 aaKnown RBP13.28□□□□□ -0.28
TOP3B-212ENST00000456075 PHAXQ9H814 394 aaKnown RBP13.28□□□□□ -0.28
TOP3B-212ENST00000456075 UBN2Q6ZU65 1347 aa13.28□□□□□ -0.28
TOP3B-212ENST00000456075 IBTKQ9P2D0 1353 aaPredicted RBP13.28□□□□□ -0.28
TOP3B-212ENST00000456075 KIAA1551Q9HCM1 1747 aa13.27□□□□□ -0.28
TOP3B-212ENST00000456075 NUP98P52948 1817 aa13.27□□□□□ -0.28
TOP3B-212ENST00000456075 SLC4A2P04920 1241 aa13.27□□□□□ -0.29
TOP3B-212ENST00000456075 ERFEQ4G0M1 354 aa13.27□□□□□ -0.29
TOP3B-212ENST00000456075 SUSD4Q5VX71 490 aa13.27□□□□□ -0.29
TOP3B-212ENST00000456075 CNKSR1Q969H4 720 aa13.27□□□□□ -0.29
TOP3B-212ENST00000456075 MASTLQ96GX5 879 aa13.27□□□□□ -0.29
TOP3B-212ENST00000456075 TRMT112Q9UI30 125 aaKnown RBP13.27□□□□□ -0.29
TOP3B-212ENST00000456075 RNF123Q5XPI4 1314 aa13.26□□□□□ -0.29
TOP3B-212ENST00000456075 STYK1Q6J9G0 422 aa13.26□□□□□ -0.29
TOP3B-212ENST00000456075 NLRP10Q86W26 655 aa13.26□□□□□ -0.29
TOP3B-212ENST00000456075 RPGRQ92834 1020 aaKnown RBP13.26□□□□□ -0.29
TOP3B-212ENST00000456075 ZNF521Q96K83 1311 aa13.26□□□□□ -0.29
TOP3B-212ENST00000456075 SPINK5Q9NQ38 1064 aaPredicted RBP13.26□□□□□ -0.29
TOP3B-212ENST00000456075 ATP5J2-PTCD1G3V325 749 aa13.25□□□□□ -0.29
TOP3B-212ENST00000456075 NTSR2O95665 410 aa13.25□□□□□ -0.29
TOP3B-212ENST00000456075 SRGNP10124 158 aa13.25□□□□□ -0.29
TOP3B-212ENST00000456075 NPR1P16066 1061 aa13.25□□□□□ -0.29
TOP3B-212ENST00000456075 NEXNQ0ZGT2 675 aa13.25□□□□□ -0.29
TOP3B-212ENST00000456075 ABCC12Q96J65 1359 aa13.24□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 88.7 ms