RNA–Protein interactions for RNA: ENST00000455939.1

LINC00161-202, long intergenic non-protein coding RNA 161, humanhuman

TSL 2

Gene LINC00161, Length 514 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00161-202ENST00000455939 RTN1Q16799 776 aa9.16□□□□□ -0.94
LINC00161-202ENST00000455939 FIGNL1Q6PIW4 674 aa9.16□□□□□ -0.94
LINC00161-202ENST00000455939 NLRP8Q86W28 1048 aa9.16□□□□□ -0.94
LINC00161-202ENST00000455939 HSH2DQ96JZ2 352 aa9.16□□□□□ -0.94
LINC00161-202ENST00000455939 ZCCHC2Q9C0B9 1178 aaKnown RBP9.16□□□□□ -0.94
LINC00161-202ENST00000455939 GMPRP36959 345 aa9.15□□□□□ -0.94
LINC00161-202ENST00000455939 CAPN12Q6ZSI9 719 aa9.15□□□□□ -0.94
LINC00161-202ENST00000455939 KLRG1Q96E93 195 aa9.15□□□□□ -0.94
LINC00161-202ENST00000455939 QTRT2Q9H974 415 aaKnown RBP9.15□□□□□ -0.94
LINC00161-202ENST00000455939 ANKIB1Q9P2G1 1089 aa9.15□□□□□ -0.94
LINC00161-202ENST00000455939 GPC6Q9Y625 555 aaPredicted RBP9.15□□□□□ -0.94
LINC00161-202ENST00000455939 CCDC180Q9P1Z9 1646 aa9.15□□□□□ -0.94
LINC00161-202ENST00000455939 DCDC2BA2VCK2 349 aa9.14□□□□□ -0.95
LINC00161-202ENST00000455939 ATXN7O15265 892 aaPredicted RBP9.14□□□□□ -0.95
LINC00161-202ENST00000455939 PTCD1O75127 700 aaKnown RBP9.14□□□□□ -0.95
LINC00161-202ENST00000455939 DGKZQ13574 1117 aa9.14□□□□□ -0.95
LINC00161-202ENST00000455939 HIF1AQ16665 826 aa9.14□□□□□ -0.95
LINC00161-202ENST00000455939 ABHD17AQ96GS6 310 aa9.14□□□□□ -0.95
LINC00161-202ENST00000455939 SUSD3Q96L08 255 aa9.14□□□□□ -0.95
LINC00161-202ENST00000455939 COL25A1Q9BXS0 654 aaPredicted RBP9.14□□□□□ -0.95
LINC00161-202ENST00000455939 KLK14Q9P0G3 267 aa9.14□□□□□ -0.95
LINC00161-202ENST00000455939 PHF24Q9UPV7 400 aa9.14□□□□□ -0.95
LINC00161-202ENST00000455939 PCDHGC4Q9Y5F7 938 aa9.14□□□□□ -0.95
LINC00161-202ENST00000455939 KHNYNO15037 678 aaKnown RBP9.13□□□□□ -0.95
LINC00161-202ENST00000455939 SSFA2P28290 1259 aa9.13□□□□□ -0.95
LINC00161-202ENST00000455939 SCNN1AP37088 669 aa9.13□□□□□ -0.95
LINC00161-202ENST00000455939 B4GALNT3Q6L9W6 998 aa9.13□□□□□ -0.95
LINC00161-202ENST00000455939 C16orf46Q6P387 395 aa9.13□□□□□ -0.95
LINC00161-202ENST00000455939 ZNF280CQ8ND82 737 aa9.13□□□□□ -0.95
LINC00161-202ENST00000455939 BNIP3LO60238 219 aa9.12□□□□□ -0.95
LINC00161-202ENST00000455939 C7orf43Q8WVR3 580 aa9.12□□□□□ -0.95
LINC00161-202ENST00000455939 CNTNAP3BQ96NU0 1288 aa9.12□□□□□ -0.95
LINC00161-202ENST00000455939 CNTNAP3Q9BZ76 1288 aa9.12□□□□□ -0.95
LINC00161-202ENST00000455939 UBAP2LQ14157 1087 aaKnown RBP9.11□□□□□ -0.95
LINC00161-202ENST00000455939 COX20Q5RI15 118 aa9.11□□□□□ -0.95
LINC00161-202ENST00000455939 COL26A1Q96A83 441 aa9.11□□□□□ -0.95
LINC00161-202ENST00000455939 CEP63Q96MT8 703 aa9.11□□□□□ -0.95
LINC00161-202ENST00000455939 SAP130Q9H0E3 1048 aa9.11□□□□□ -0.95
LINC00161-202ENST00000455939 SEPT3Q9UH03 358 aa9.11□□□□□ -0.95
LINC00161-202ENST00000455939 ATXN7L1Q9ULK2 861 aaPredicted RBP9.11□□□□□ -0.95
LINC00161-202ENST00000455939 MX2P20592 715 aa9.1□□□□□ -0.95
LINC00161-202ENST00000455939 LORP23490 312 aaPredicted RBP9.1□□□□□ -0.95
LINC00161-202ENST00000455939 C11orf91Q3C1V1 193 aa9.1□□□□□ -0.95
LINC00161-202ENST00000455939 RNFT1Q5M7Z0 435 aa9.1□□□□□ -0.95
LINC00161-202ENST00000455939 MYO19Q96H55 970 aa9.1□□□□□ -0.95
LINC00161-202ENST00000455939 CFHR5Q9BXR6 569 aa9.1□□□□□ -0.95
LINC00161-202ENST00000455939 LRFN2Q9ULH4 789 aa9.1□□□□□ -0.95
LINC00161-202ENST00000455939 MAPTP10636 758 aaKnown RBP9.09□□□□□ -0.95
LINC00161-202ENST00000455939 FGFR3P22607 806 aa9.09□□□□□ -0.95
LINC00161-202ENST00000455939 GAS6Q14393 721 aa9.09□□□□□ -0.95
LINC00161-202ENST00000455939 SAMD5Q5TGI4 173 aa9.09□□□□□ -0.95
LINC00161-202ENST00000455939 MTMR7Q9Y216 660 aa9.09□□□□□ -0.95
LINC00161-202ENST00000455939 TGFBR3LH3BV60 316 aa9.08□□□□□ -0.96
LINC00161-202ENST00000455939 FAM157BP0CG42 384 aa9.08□□□□□ -0.96
LINC00161-202ENST00000455939 CD33P20138 364 aa9.08□□□□□ -0.96
LINC00161-202ENST00000455939 KRT76Q01546 638 aa9.08□□□□□ -0.96
LINC00161-202ENST00000455939 PHLDB3Q6NSJ2 640 aa9.08□□□□□ -0.96
LINC00161-202ENST00000455939 BTLAQ7Z6A9 289 aa9.08□□□□□ -0.96
LINC00161-202ENST00000455939 IFT43Q96FT9 208 aa9.08□□□□□ -0.96
LINC00161-202ENST00000455939 MBIPQ9NS73 344 aa9.08□□□□□ -0.96
LINC00161-202ENST00000455939 NDFIP2Q9NV92 336 aa9.08□□□□□ -0.96
LINC00161-202ENST00000455939 TNP2Q05952 138 aa9.07□□□□□ -0.96
LINC00161-202ENST00000455939 BRD7Q9NPI1 651 aa9.07□□□□□ -0.96
LINC00161-202ENST00000455939 NSFL1CQ9UNZ2 370 aaKnown RBP9.07□□□□□ -0.96
LINC00161-202ENST00000455939 BCS1LQ9Y276 419 aa9.07□□□□□ -0.96
LINC00161-202ENST00000455939 ABL1P00519 1130 aa9.06□□□□□ -0.96
LINC00161-202ENST00000455939 BMP4P12644 408 aa9.06□□□□□ -0.96
LINC00161-202ENST00000455939 BRD2P25440 801 aaKnown RBP9.06□□□□□ -0.96
LINC00161-202ENST00000455939 TYRO3Q06418 890 aa9.06□□□□□ -0.96
LINC00161-202ENST00000455939 GTF3C2Q8WUA4 911 aaPredicted RBP9.06□□□□□ -0.96
LINC00161-202ENST00000455939 IDH3AP50213 366 aa9.05□□□□□ -0.96
LINC00161-202ENST00000455939 CTBSQ01459 385 aa9.05□□□□□ -0.96
LINC00161-202ENST00000455939 IER5Q5VY09 327 aa9.05□□□□□ -0.96
LINC00161-202ENST00000455939 TREML1Q86YW5 311 aa9.05□□□□□ -0.96
LINC00161-202ENST00000455939 MARK1Q9P0L2 795 aa9.05□□□□□ -0.96
LINC00161-202ENST00000455939 IGF1RP08069 1367 aa9.04□□□□□ -0.96
LINC00161-202ENST00000455939 MICAL2O94851 1124 aa9.04□□□□□ -0.96
LINC00161-202ENST00000455939 ARID4AP29374 1257 aaPredicted RBP9.04□□□□□ -0.96
LINC00161-202ENST00000455939 SFSWAPQ12872 951 aaKnown RBP9.04□□□□□ -0.96
LINC00161-202ENST00000455939 STRN4Q9NRL3 753 aa9.04□□□□□ -0.96
LINC00161-202ENST00000455939 TNFRSF10BO14763 440 aa9.03□□□□□ -0.96
LINC00161-202ENST00000455939 EFSO43281 561 aa9.03□□□□□ -0.96
LINC00161-202ENST00000455939 ADAMTS2O95450 1211 aa9.03□□□□□ -0.96
LINC00161-202ENST00000455939 SRSF11Q05519 484 aaKnown RBP9.03□□□□□ -0.96
LINC00161-202ENST00000455939 MTMR3Q13615 1198 aa9.03□□□□□ -0.96
LINC00161-202ENST00000455939 HELQQ8TDG4 1101 aa9.03□□□□□ -0.96
LINC00161-202ENST00000455939 ANO2Q9NQ90 1003 aa9.03□□□□□ -0.96
LINC00161-202ENST00000455939 STIM2Q9P246 746 aa9.03□□□□□ -0.96
LINC00161-202ENST00000455939 PRR12Q9ULL5 1215 aa9.03□□□□□ -0.96
LINC00161-202ENST00000455939 KCNH4Q9UQ05 1017 aa9.03□□□□□ -0.96
LINC00161-202ENST00000455939 PDIA4P13667 645 aaKnown RBP9.02□□□□□ -0.97
LINC00161-202ENST00000455939 EPB42P16452 691 aa9.02□□□□□ -0.97
LINC00161-202ENST00000455939 ARSDP51689 593 aa9.02□□□□□ -0.97
LINC00161-202ENST00000455939 ZNF211Q13398 564 aaPredicted RBP9.02□□□□□ -0.97
LINC00161-202ENST00000455939 LAMC2Q13753 1193 aa9.02□□□□□ -0.97
LINC00161-202ENST00000455939 ETFBKMTQ8IXQ9 262 aa9.02□□□□□ -0.97
LINC00161-202ENST00000455939 DMGDHQ9UI17 866 aaKnown RBP9.02□□□□□ -0.97
LINC00161-202ENST00000455939 DNMT3AQ9Y6K1 912 aaPredicted RBP9.02□□□□□ -0.97
LINC00161-202ENST00000455939 RB1CC1Q8TDY2 1594 aa9.02□□□□□ -0.97
LINC00161-202ENST00000455939 BRD1O95696 1058 aa9.01□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms