RNA–Protein interactions for RNA: ENST00000454905.5

SIK3-206, Transcript of SIK family kinase 3, humanhuman

TSL 5

Gene SIK3, Length 294 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIK3-206ENST00000454905 CNKSR1Q969H4 720 aa9.6□□□□□ -0.87
SIK3-206ENST00000454905 ANKRD31Q8N7Z5 1873 aa9.59□□□□□ -0.87
SIK3-206ENST00000454905 KDM2BQ8NHM5 1336 aa9.59□□□□□ -0.87
SIK3-206ENST00000454905 TMPOP42166 694 aaKnown RBP9.59□□□□□ -0.87
SIK3-206ENST00000454905 PRELPP51888 382 aa9.59□□□□□ -0.87
SIK3-206ENST00000454905 DDX10Q13206 875 aaKnown RBP9.59□□□□□ -0.87
SIK3-206ENST00000454905 TPTE2Q6XPS3 522 aa9.59□□□□□ -0.87
SIK3-206ENST00000454905 LRP10Q7Z4F1 713 aa9.59□□□□□ -0.87
SIK3-206ENST00000454905 RBM46Q8TBY0 533 aaKnown RBP9.59□□□□□ -0.87
SIK3-206ENST00000454905 C7orf43Q8WVR3 580 aa9.59□□□□□ -0.87
SIK3-206ENST00000454905 MASTLQ96GX5 879 aa9.59□□□□□ -0.87
SIK3-206ENST00000454905 MIS18AQ9NYP9 233 aa9.59□□□□□ -0.87
SIK3-206ENST00000454905 RNF181Q9P0P0 153 aa9.59□□□□□ -0.87
SIK3-206ENST00000454905 ZNF330Q9Y3S2 320 aaPredicted RBP9.59□□□□□ -0.87
SIK3-206ENST00000454905 MAP3K15Q6ZN16 1313 aa9.58□□□□□ -0.88
SIK3-206ENST00000454905 DLG5Q8TDM6 1919 aa9.58□□□□□ -0.88
SIK3-206ENST00000454905 SBF1O95248 1867 aa9.58□□□□□ -0.88
SIK3-206ENST00000454905 RIPK4P57078 832 aa9.58□□□□□ -0.88
SIK3-206ENST00000454905 CRY2Q49AN0 593 aa9.58□□□□□ -0.88
SIK3-206ENST00000454905 NBPF5PQ86XG9 351 aaPredicted RBP9.58□□□□□ -0.88
SIK3-206ENST00000454905 ZNF526Q8TF50 670 aaPredicted RBP9.58□□□□□ -0.88
SIK3-206ENST00000454905 PRKRIP1Q9H875 184 aaPredicted RBP9.58□□□□□ -0.88
SIK3-206ENST00000454905 NIP7Q9Y221 180 aaKnown RBP eCLIP9.58□□□□□ -0.88
SIK3-206ENST00000454905 COL11A2P13942 1736 aaPredicted RBP9.57□□□□□ -0.88
SIK3-206ENST00000454905 GLTPD2A6NH11 291 aa9.57□□□□□ -0.88
SIK3-206ENST00000454905 CHL1O00533 1208 aa9.57□□□□□ -0.88
SIK3-206ENST00000454905 NPR1P16066 1061 aa9.57□□□□□ -0.88
SIK3-206ENST00000454905 PIP4K2AP48426 406 aaPredicted RBP9.57□□□□□ -0.88
SIK3-206ENST00000454905 FSTL1Q12841 308 aa9.57□□□□□ -0.88
SIK3-206ENST00000454905 HLFQ16534 295 aa9.57□□□□□ -0.88
SIK3-206ENST00000454905 RUNDC1Q96C34 613 aa9.57□□□□□ -0.88
SIK3-206ENST00000454905 THUMPD2Q9BTF0 503 aaKnown RBP9.57□□□□□ -0.88
SIK3-206ENST00000454905 NYXQ9GZU5 481 aa9.57□□□□□ -0.88
SIK3-206ENST00000454905 NMRK2Q9NPI5 230 aa9.57□□□□□ -0.88
SIK3-206ENST00000454905 TSPYL4Q9UJ04 414 aa9.57□□□□□ -0.88
SIK3-206ENST00000454905 ARFGEF2Q9Y6D5 1785 aa9.56□□□□□ -0.88
SIK3-206ENST00000454905 HOXB7P09629 217 aa9.56□□□□□ -0.88
SIK3-206ENST00000454905 APLP1P51693 650 aa9.56□□□□□ -0.88
SIK3-206ENST00000454905 RASSF7Q02833 373 aa9.56□□□□□ -0.88
SIK3-206ENST00000454905 PDIA6Q15084 440 aa9.56□□□□□ -0.88
SIK3-206ENST00000454905 PRPF40BQ6NWY9 871 aaKnown RBP9.56□□□□□ -0.88
SIK3-206ENST00000454905 ZNF34Q8IZ26 560 aa9.56□□□□□ -0.88
SIK3-206ENST00000454905 ZNF622Q969S3 477 aaKnown RBP eCLIP9.56□□□□□ -0.88
SIK3-206ENST00000454905 SNED1Q8TER0 1413 aa9.56□□□□□ -0.88
SIK3-206ENST00000454905 RNF123Q5XPI4 1314 aa9.56□□□□□ -0.88
SIK3-206ENST00000454905 FER1L6Q2WGJ9 1857 aa9.55□□□□□ -0.88
SIK3-206ENST00000454905 TNRC6CQ9HCJ0 1690 aaKnown RBP9.55□□□□□ -0.88
SIK3-206ENST00000454905 C21orf2O43822 256 aa9.55□□□□□ -0.88
SIK3-206ENST00000454905 ALDH1B1P30837 517 aa9.55□□□□□ -0.88
SIK3-206ENST00000454905 HOXA10P31260 410 aaPredicted RBP9.55□□□□□ -0.88
SIK3-206ENST00000454905 GIGYF2Q6Y7W6 1299 aaKnown RBP9.55□□□□□ -0.88
SIK3-206ENST00000454905 KIF6Q6ZMV9 814 aa9.55□□□□□ -0.88
SIK3-206ENST00000454905 TTLL7Q6ZT98 887 aa9.55□□□□□ -0.88
SIK3-206ENST00000454905 TAOK3Q9H2K8 898 aa9.55□□□□□ -0.88
SIK3-206ENST00000454905 TRIM35Q9UPQ4 493 aa9.55□□□□□ -0.88
SIK3-206ENST00000454905 NPHP1O15259 732 aa9.54□□□□□ -0.88
SIK3-206ENST00000454905 VEGFAP15692 232 aaPredicted RBP9.54□□□□□ -0.88
SIK3-206ENST00000454905 GRIPAP1Q4V328 841 aa9.54□□□□□ -0.88
SIK3-206ENST00000454905 PARP10Q53GL7 1025 aa9.54□□□□□ -0.88
SIK3-206ENST00000454905 CCDC93Q567U6 631 aa9.54□□□□□ -0.88
SIK3-206ENST00000454905 SLC10A5Q5PT55 438 aa9.54□□□□□ -0.88
SIK3-206ENST00000454905 CC2D2BQ6DHV5 1058 aa9.54□□□□□ -0.88
SIK3-206ENST00000454905 CCDC24Q8N4L8 307 aa9.54□□□□□ -0.88
SIK3-206ENST00000454905 ADAMTS8Q9UP79 889 aa9.54□□□□□ -0.88
SIK3-206ENST00000454905 UBN2Q6ZU65 1347 aa9.54□□□□□ -0.88
SIK3-206ENST00000454905 NTSR2O95665 410 aa9.53□□□□□ -0.88
SIK3-206ENST00000454905 WDR43Q15061 677 aaKnown RBP eCLIP9.53□□□□□ -0.88
SIK3-206ENST00000454905 NCBP3Q53F19 620 aaKnown RBP9.53□□□□□ -0.88
SIK3-206ENST00000454905 DPY19L2Q6NUT2 758 aa9.53□□□□□ -0.88
SIK3-206ENST00000454905 RTKN2Q8IZC4 609 aa9.53□□□□□ -0.88
SIK3-206ENST00000454905 DNAJC5GQ8N7S2 189 aa9.53□□□□□ -0.88
SIK3-206ENST00000454905 CFAP44Q96MT7 982 aa9.53□□□□□ -0.88
SIK3-206ENST00000454905 RRAGCQ9HB90 399 aa9.53□□□□□ -0.88
SIK3-206ENST00000454905 DDX21Q9NR30 783 aaKnown RBP eCLIP9.53□□□□□ -0.88
SIK3-206ENST00000454905 RRP7AQ9Y3A4 280 aaKnown RBP9.53□□□□□ -0.88
SIK3-206ENST00000454905 WDR90Q96KV7 1748 aa9.53□□□□□ -0.88
SIK3-206ENST00000454905 ABCC12Q96J65 1359 aa9.52□□□□□ -0.88
SIK3-206ENST00000454905 SLX4Q8IY92 1834 aa9.52□□□□□ -0.89
SIK3-206ENST00000454905 PCNTO95613 3336 aa9.52□□□□□ -0.89
SIK3-206ENST00000454905 POTECB2RU33 542 aa9.52□□□□□ -0.89
SIK3-206ENST00000454905 ZNF853P0CG23 659 aa9.52□□□□□ -0.89
SIK3-206ENST00000454905 MYL6BP14649 208 aa9.52□□□□□ -0.89
SIK3-206ENST00000454905 FKBP4Q02790 459 aaKnown RBP eCLIP9.52□□□□□ -0.89
SIK3-206ENST00000454905 ERFEQ4G0M1 354 aa9.52□□□□□ -0.89
SIK3-206ENST00000454905 HSP90AB3PQ58FF7 597 aa9.52□□□□□ -0.89
SIK3-206ENST00000454905 C16orf71Q8IYS4 520 aaPredicted RBP9.52□□□□□ -0.89
SIK3-206ENST00000454905 SMC1BQ8NDV3 1235 aa9.52□□□□□ -0.89
SIK3-206ENST00000454905 L3MBTL3Q96JM7 780 aaPredicted RBP9.52□□□□□ -0.89
SIK3-206ENST00000454905 CRAMP1Q96RY5 1269 aa9.52□□□□□ -0.89
SIK3-206ENST00000454905 PSMD1Q99460 953 aa9.52□□□□□ -0.89
SIK3-206ENST00000454905 DICER1Q9UPY3 1922 aaKnown RBP9.51□□□□□ -0.89
SIK3-206ENST00000454905 GTF2E1P29083 439 aaPredicted RBP9.51□□□□□ -0.89
SIK3-206ENST00000454905 ZEB1P37275 1124 aaPredicted RBP9.51□□□□□ -0.89
SIK3-206ENST00000454905 SUSD4Q5VX71 490 aa9.51□□□□□ -0.89
SIK3-206ENST00000454905 PPP1R42Q7Z4L9 355 aa9.51□□□□□ -0.89
SIK3-206ENST00000454905 NUP98P52948 1817 aa9.51□□□□□ -0.89
SIK3-206ENST00000454905 TIAM2Q8IVF5 1701 aa9.51□□□□□ -0.89
SIK3-206ENST00000454905 CALD1Q05682 793 aaKnown RBP9.5□□□□□ -0.89
SIK3-206ENST00000454905 PROSER3Q2NL68 480 aa9.5□□□□□ -0.89
SIK3-206ENST00000454905 CCDC146Q8IYE0 955 aa9.5□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms