RNA–Protein interactions for RNA: ENST00000454569.5

SCN9A-205, Transcript of sodium voltage-gated channel alpha subunit 9, humanhuman

TSL 1 (best)

Gene SCN9A, Length 1,585 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN9A-205ENST00000454569 CRKLP46109 303 aaKnown RBP14□□□□□ -0.17
SCN9A-205ENST00000454569 TTLL7Q6ZT98 887 aa14□□□□□ -0.17
SCN9A-205ENST00000454569 AMIGO3Q86WK7 504 aa14□□□□□ -0.17
SCN9A-205ENST00000454569 DZIP1LQ8IYY4 767 aaKnown RBP14□□□□□ -0.17
SCN9A-205ENST00000454569 TMEM57Q8N5G2 664 aa14□□□□□ -0.17
SCN9A-205ENST00000454569 GOLGA6L2Q8N9W4 650 aaPredicted RBP14□□□□□ -0.17
SCN9A-205ENST00000454569 ARHGAP45Q92619 1136 aa14□□□□□ -0.17
SCN9A-205ENST00000454569 NUP98P52948 1817 aa14□□□□□ -0.17
SCN9A-205ENST00000454569 FKBP5Q13451 457 aaPredicted RBP14□□□□□ -0.17
SCN9A-205ENST00000454569 PDE3AQ14432 1141 aa14□□□□□ -0.17
SCN9A-205ENST00000454569 TEX13AQ9BXU3 409 aaPredicted RBP14□□□□□ -0.17
SCN9A-205ENST00000454569 HYPKQ9NX55 129 aa14□□□□□ -0.17
SCN9A-205ENST00000454569 CCNL1Q9UK58 526 aaPredicted RBP14□□□□□ -0.17
SCN9A-205ENST00000454569 C4BP0C0L5 1744 aa14□□□□□ -0.17
SCN9A-205ENST00000454569 ABCC4O15439 1325 aa13.99□□□□□ -0.17
SCN9A-205ENST00000454569 PTPRCP08575 1304 aa13.99□□□□□ -0.17
SCN9A-205ENST00000454569 PI4KAP2A4QPH2 592 aa13.99□□□□□ -0.17
SCN9A-205ENST00000454569 IPO8O15397 1037 aaKnown RBP13.99□□□□□ -0.17
SCN9A-205ENST00000454569 STARD3NLO95772 234 aa13.99□□□□□ -0.17
SCN9A-205ENST00000454569 NEFLP07196 543 aa13.99□□□□□ -0.17
SCN9A-205ENST00000454569 PI4KAP1Q8N8J0 262 aa13.99□□□□□ -0.17
SCN9A-205ENST00000454569 UBR3Q6ZT12 1888 aa13.99□□□□□ -0.17
SCN9A-205ENST00000454569 AFDNP55196 1824 aaKnown RBP13.99□□□□□ -0.17
SCN9A-205ENST00000454569 TUBGCP6Q96RT7 1819 aa13.98□□□□□ -0.17
SCN9A-205ENST00000454569 CCDC87Q9NVE4 849 aa13.98□□□□□ -0.17
SCN9A-205ENST00000454569 ZNF330Q9Y3S2 320 aaPredicted RBP13.98□□□□□ -0.17
SCN9A-205ENST00000454569 ERBB4Q15303 1308 aa13.97□□□□□ -0.17
SCN9A-205ENST00000454569 TXNRD1Q16881 649 aa13.97□□□□□ -0.17
SCN9A-205ENST00000454569 API5Q9BZZ5 524 aaKnown RBP13.97□□□□□ -0.17
SCN9A-205ENST00000454569 EIF5P55010 431 aaKnown RBP13.96□□□□□ -0.17
SCN9A-205ENST00000454569 SLC4A10Q6U841 1118 aa13.96□□□□□ -0.17
SCN9A-205ENST00000454569 MAP3K2Q9Y2U5 619 aa13.96□□□□□ -0.17
SCN9A-205ENST00000454569 PLSCR1O15162 318 aa13.96□□□□□ -0.18
SCN9A-205ENST00000454569 RGL2O15211 777 aa13.96□□□□□ -0.18
SCN9A-205ENST00000454569 MVPQ14764 893 aaKnown RBP13.96□□□□□ -0.18
SCN9A-205ENST00000454569 KSR2Q6VAB6 950 aa13.96□□□□□ -0.18
SCN9A-205ENST00000454569 FTSJ3Q8IY81 847 aaKnown RBP13.96□□□□□ -0.18
SCN9A-205ENST00000454569 RGPD3A6NKT7 1758 aaPredicted RBP13.96□□□□□ -0.18
SCN9A-205ENST00000454569 RGPD4Q7Z3J3 1758 aa13.96□□□□□ -0.18
SCN9A-205ENST00000454569 C4AP0C0L4 1744 aa13.95□□□□□ -0.18
SCN9A-205ENST00000454569 EN1Q05925 392 aaPredicted RBP13.95□□□□□ -0.18
SCN9A-205ENST00000454569 INTS3Q68E01 1043 aaKnown RBP13.95□□□□□ -0.18
SCN9A-205ENST00000454569 DEFB132Q7Z7B7 95 aa13.95□□□□□ -0.18
SCN9A-205ENST00000454569 ITPRIPQ8IWB1 547 aa13.95□□□□□ -0.18
SCN9A-205ENST00000454569 DNAAF4Q8WXU2 420 aa13.95□□□□□ -0.18
SCN9A-205ENST00000454569 CHMP4AQ9BY43 222 aa13.95□□□□□ -0.18
SCN9A-205ENST00000454569 ZBTB3Q9H5J0 574 aa13.95□□□□□ -0.18
SCN9A-205ENST00000454569 TBC1D2BQ9UPU7 963 aa13.95□□□□□ -0.18
SCN9A-205ENST00000454569 CNTNAP4Q9C0A0 1308 aa13.94□□□□□ -0.18
SCN9A-205ENST00000454569 IL6STP40189 918 aaPredicted RBP13.94□□□□□ -0.18
SCN9A-205ENST00000454569 EZH2Q15910 746 aaKnown RBP13.94□□□□□ -0.18
SCN9A-205ENST00000454569 HLFQ16534 295 aa13.94□□□□□ -0.18
SCN9A-205ENST00000454569 BEND3Q5T5X7 828 aa13.94□□□□□ -0.18
SCN9A-205ENST00000454569 ANKRD13DQ6ZTN6 518 aa13.94□□□□□ -0.18
SCN9A-205ENST00000454569 ANKRD36CQ5JPF3 1778 aa13.94□□□□□ -0.18
SCN9A-205ENST00000454569 BCORQ6W2J9 1755 aa13.93□□□□□ -0.18
SCN9A-205ENST00000454569 ZBTB7BO15156 539 aaPredicted RBP13.93□□□□□ -0.18
SCN9A-205ENST00000454569 IGKV5-2P06315 115 aa13.93□□□□□ -0.18
SCN9A-205ENST00000454569 RIC3Q7Z5B4 369 aa13.93□□□□□ -0.18
SCN9A-205ENST00000454569 CAMKK2Q96RR4 588 aa13.93□□□□□ -0.18
SCN9A-205ENST00000454569 CWF19L2Q2TBE0 894 aaKnown RBP13.92□□□□□ -0.18
SCN9A-205ENST00000454569 RC3H1Q5TC82 1133 aaKnown RBP13.92□□□□□ -0.18
SCN9A-205ENST00000454569 PLBD2Q8NHP8 589 aa13.92□□□□□ -0.18
SCN9A-205ENST00000454569 ARXQ96QS3 562 aa13.92□□□□□ -0.18
SCN9A-205ENST00000454569 ZBTB47Q9UFB7 747 aaPredicted RBP13.92□□□□□ -0.18
SCN9A-205ENST00000454569 ATP5J2-PTCD1G3V325 749 aa13.92□□□□□ -0.18
SCN9A-205ENST00000454569 GNPATO15228 680 aa13.92□□□□□ -0.18
SCN9A-205ENST00000454569 RPS6KA4O75676 772 aa13.92□□□□□ -0.18
SCN9A-205ENST00000454569 ZNF827Q17R98 1081 aa13.92□□□□□ -0.18
SCN9A-205ENST00000454569 SLC27A3Q5K4L6 730 aa13.92□□□□□ -0.18
SCN9A-205ENST00000454569 MYD88Q99836 296 aa13.92□□□□□ -0.18
SCN9A-205ENST00000454569 PXDNLA1KZ92 1463 aa13.91□□□□□ -0.18
SCN9A-205ENST00000454569 COL15A1P39059 1388 aa13.91□□□□□ -0.18
SCN9A-205ENST00000454569 MS4A1P11836 297 aa13.91□□□□□ -0.18
SCN9A-205ENST00000454569 DZIP3Q86Y13 1208 aaKnown RBP13.91□□□□□ -0.18
SCN9A-205ENST00000454569 MEIS3Q99687 375 aa13.91□□□□□ -0.18
SCN9A-205ENST00000454569 METTL22Q9BUU2 404 aaPredicted RBP13.91□□□□□ -0.18
SCN9A-205ENST00000454569 MAP3K15Q6ZN16 1313 aa13.9□□□□□ -0.18
SCN9A-205ENST00000454569 DDX58O95786 925 aaKnown RBP13.9□□□□□ -0.18
SCN9A-205ENST00000454569 JARID2Q92833 1246 aaPredicted RBP13.9□□□□□ -0.18
SCN9A-205ENST00000454569 C1orf115Q9H7X2 142 aa13.9□□□□□ -0.18
SCN9A-205ENST00000454569 SRP68Q9UHB9 627 aaKnown RBP13.9□□□□□ -0.18
SCN9A-205ENST00000454569 ATP10DQ9P241 1426 aa13.89□□□□□ -0.19
SCN9A-205ENST00000454569 PHF14O94880 888 aa13.89□□□□□ -0.19
SCN9A-205ENST00000454569 CAMTA2O94983 1202 aa13.89□□□□□ -0.19
SCN9A-205ENST00000454569 CCT4P50991 539 aaKnown RBP13.89□□□□□ -0.19
SCN9A-205ENST00000454569 ILDR2Q71H61 639 aa13.89□□□□□ -0.19
SCN9A-205ENST00000454569 BBXQ8WY36 941 aaPredicted RBP13.89□□□□□ -0.19
SCN9A-205ENST00000454569 ARHGEF1Q92888 912 aaKnown RBP13.89□□□□□ -0.19
SCN9A-205ENST00000454569 USP44Q9H0E7 712 aa13.89□□□□□ -0.19
SCN9A-205ENST00000454569 BCL2L12Q9HB09 334 aa13.89□□□□□ -0.19
SCN9A-205ENST00000454569 ZBTB40Q9NUA8 1239 aa13.89□□□□□ -0.19
SCN9A-205ENST00000454569 DDX19BQ9UMR2 479 aa13.89□□□□□ -0.19
SCN9A-205ENST00000454569 PCDHB15Q9Y5E8 787 aa13.89□□□□□ -0.19
SCN9A-205ENST00000454569 SCN7AQ01118 1682 aa13.89□□□□□ -0.19
SCN9A-205ENST00000454569 NEURL1BA8MQ27 555 aa13.88□□□□□ -0.19
SCN9A-205ENST00000454569 AKT1S1Q96B36 256 aa13.88□□□□□ -0.19
SCN9A-205ENST00000454569 SRCIN1Q9C0H9 1055 aa13.88□□□□□ -0.19
SCN9A-205ENST00000454569 ANO8Q9HCE9 1232 aaPredicted RBP13.88□□□□□ -0.19
SCN9A-205ENST00000454569 NBPF7P0C2Y1 421 aaPredicted RBP13.88□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 44.6 ms