RNA–Protein interactions for RNA: ENST00000454568.1

RFC3P1-201, Transcript of replication factor C 3 pseudogene 1, humanhuman

BASIC

Gene RFC3P1, Length 682 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC3P1-201ENST00000454568 DEFB132Q7Z7B7 95 aa12.04□□□□□ -0.48
RFC3P1-201ENST00000454568 DACH1Q9UI36 760 aa12.04□□□□□ -0.48
RFC3P1-201ENST00000454568 TTC21BQ7Z4L5 1316 aa12.04□□□□□ -0.48
RFC3P1-201ENST00000454568 NRKQ7Z2Y5 1582 aa12.04□□□□□ -0.48
RFC3P1-201ENST00000454568 KTN1Q86UP2 1357 aaKnown RBP12.04□□□□□ -0.48
RFC3P1-201ENST00000454568 EP400Q96L91 3159 aa12.04□□□□□ -0.48
RFC3P1-201ENST00000454568 BAG6P46379 1132 aa12.03□□□□□ -0.48
RFC3P1-201ENST00000454568 PDE3BQ13370 1112 aa12.03□□□□□ -0.48
RFC3P1-201ENST00000454568 LARP1Q6PKG0 1096 aaKnown RBP12.03□□□□□ -0.48
RFC3P1-201ENST00000454568 RNF19BQ6ZMZ0 732 aa12.03□□□□□ -0.48
RFC3P1-201ENST00000454568 GPIHBP1Q8IV16 184 aa12.03□□□□□ -0.48
RFC3P1-201ENST00000454568 NLRP7Q8WX94 980 aa12.03□□□□□ -0.48
RFC3P1-201ENST00000454568 REPIN1Q9BWE0 567 aaKnown RBP12.03□□□□□ -0.48
RFC3P1-201ENST00000454568 CPDO75976 1380 aa12.03□□□□□ -0.48
RFC3P1-201ENST00000454568 SSH2Q76I76 1423 aa12.03□□□□□ -0.48
RFC3P1-201ENST00000454568 MMP16P51512 607 aa12.02□□□□□ -0.49
RFC3P1-201ENST00000454568 TRIM32Q13049 653 aa12.02□□□□□ -0.49
RFC3P1-201ENST00000454568 HDGFL2Q7Z4V5 671 aaPredicted RBP12.02□□□□□ -0.49
RFC3P1-201ENST00000454568 SUGP2Q8IX01 1082 aaKnown RBP eCLIP12.02□□□□□ -0.49
RFC3P1-201ENST00000454568 KCNH5Q8NCM2 988 aa12.02□□□□□ -0.49
RFC3P1-201ENST00000454568 PCGF6Q9BYE7 350 aa12.02□□□□□ -0.49
RFC3P1-201ENST00000454568 TTC21AQ8NDW8 1320 aa12.02□□□□□ -0.49
RFC3P1-201ENST00000454568 SBNO2Q9Y2G9 1366 aa12.02□□□□□ -0.49
RFC3P1-201ENST00000454568 CAMTA1Q9Y6Y1 1673 aa12.01□□□□□ -0.49
RFC3P1-201ENST00000454568 TCP11L2Q8N4U5 519 aa12.01□□□□□ -0.49
RFC3P1-201ENST00000454568 PHOX2BQ99453 314 aa12.01□□□□□ -0.49
RFC3P1-201ENST00000454568 AKAP12Q02952 1782 aa12□□□□□ -0.49
RFC3P1-201ENST00000454568 SLC24A1O60721 1099 aa12□□□□□ -0.49
RFC3P1-201ENST00000454568 BARGINQ6ZT62 677 aa12□□□□□ -0.49
RFC3P1-201ENST00000454568 TOM1L2Q6ZVM7 507 aa12□□□□□ -0.49
RFC3P1-201ENST00000454568 SENP2Q9HC62 589 aa12□□□□□ -0.49
RFC3P1-201ENST00000454568 TERF2IPQ9NYB0 399 aa12□□□□□ -0.49
RFC3P1-201ENST00000454568 PIK3C2AO00443 1686 aa12□□□□□ -0.49
RFC3P1-201ENST00000454568 ST20-MTHFSA0A0A6YYL1 179 aa11.99□□□□□ -0.49
RFC3P1-201ENST00000454568 CSB-PGBD3P0DP91 1061 aa11.99□□□□□ -0.49
RFC3P1-201ENST00000454568 FAM196AQ6ZSG2 479 aa11.99□□□□□ -0.49
RFC3P1-201ENST00000454568 USB1Q9BQ65 265 aaKnown RBP11.99□□□□□ -0.49
RFC3P1-201ENST00000454568 SLC12A5Q9H2X9 1139 aa11.99□□□□□ -0.49
RFC3P1-201ENST00000454568 THRAP3Q9Y2W1 955 aaKnown RBP11.99□□□□□ -0.49
RFC3P1-201ENST00000454568 CPSF1Q10570 1443 aaKnown RBP11.99□□□□□ -0.49
RFC3P1-201ENST00000454568 LMO7Q8WWI1 1683 aa11.98□□□□□ -0.49
RFC3P1-201ENST00000454568 THSD7AQ9UPZ6 1657 aa11.98□□□□□ -0.49
RFC3P1-201ENST00000454568 SLIT3O75094 1523 aa11.98□□□□□ -0.49
RFC3P1-201ENST00000454568 COL5A2P05997 1499 aaPredicted RBP11.98□□□□□ -0.49
RFC3P1-201ENST00000454568 AATKQ6ZMQ8 1374 aa11.98□□□□□ -0.49
RFC3P1-201ENST00000454568 INSM1Q01101 510 aaPredicted RBP11.98□□□□□ -0.49
RFC3P1-201ENST00000454568 CRB1P82279 1406 aa11.97□□□□□ -0.49
RFC3P1-201ENST00000454568 TRIM37O94972 964 aa11.97□□□□□ -0.49
RFC3P1-201ENST00000454568 CD46P15529 392 aa11.97□□□□□ -0.49
RFC3P1-201ENST00000454568 SMPD1P17405 629 aa11.97□□□□□ -0.49
RFC3P1-201ENST00000454568 USP46P62068 366 aa11.97□□□□□ -0.49
RFC3P1-201ENST00000454568 ARHGEF25Q86VW2 580 aa11.97□□□□□ -0.49
RFC3P1-201ENST00000454568 KDM4AO75164 1064 aa11.96□□□□□ -0.49
RFC3P1-201ENST00000454568 NME9Q86XW9 330 aa11.96□□□□□ -0.49
RFC3P1-201ENST00000454568 PUS7Q96PZ0 661 aaKnown RBP11.96□□□□□ -0.49
RFC3P1-201ENST00000454568 ATP13A2Q9NQ11 1180 aa11.96□□□□□ -0.49
RFC3P1-201ENST00000454568 STK17AQ9UEE5 414 aa11.96□□□□□ -0.49
RFC3P1-201ENST00000454568 RGPD1P0DJD0 1748 aa11.96□□□□□ -0.49
RFC3P1-201ENST00000454568 MON2Q7Z3U7 1717 aa11.95□□□□□ -0.5
RFC3P1-201ENST00000454568 DXOO77932 396 aaKnown RBP11.95□□□□□ -0.5
RFC3P1-201ENST00000454568 APBA3O96018 575 aa11.95□□□□□ -0.5
RFC3P1-201ENST00000454568 TMF1P82094 1093 aa11.95□□□□□ -0.5
RFC3P1-201ENST00000454568 DDB1Q16531 1140 aa11.95□□□□□ -0.5
RFC3P1-201ENST00000454568 MRGPRX2Q96LB1 330 aa11.95□□□□□ -0.5
RFC3P1-201ENST00000454568 WDR17Q8IZU2 1322 aa11.94□□□□□ -0.5
RFC3P1-201ENST00000454568 WIPF1O43516 503 aa11.94□□□□□ -0.5
RFC3P1-201ENST00000454568 NFX1Q12986 1120 aaKnown RBP11.94□□□□□ -0.5
RFC3P1-201ENST00000454568 KIFC2Q96AC6 838 aa11.94□□□□□ -0.5
RFC3P1-201ENST00000454568 TESK2Q96S53 571 aa11.94□□□□□ -0.5
RFC3P1-201ENST00000454568 A0A1W2PP64 1363 aa11.93□□□□□ -0.5
RFC3P1-201ENST00000454568 RGPD5Q99666 1765 aa11.93□□□□□ -0.5
RFC3P1-201ENST00000454568 EZH2Q15910 746 aaKnown RBP11.93□□□□□ -0.5
RFC3P1-201ENST00000454568 TRIM47Q96LD4 638 aa11.93□□□□□ -0.5
RFC3P1-201ENST00000454568 CDCA7Q9BWT1 371 aaPredicted RBP11.93□□□□□ -0.5
RFC3P1-201ENST00000454568 TIMELESSQ9UNS1 1208 aa11.93□□□□□ -0.5
RFC3P1-201ENST00000454568 EDC4Q6P2E9 1401 aaKnown RBP11.93□□□□□ -0.5
RFC3P1-201ENST00000454568 USP31Q70CQ4 1352 aa11.92□□□□□ -0.5
RFC3P1-201ENST00000454568 USP47Q96K76 1375 aa11.92□□□□□ -0.5
RFC3P1-201ENST00000454568 CD163L1Q9NR16 1453 aa11.92□□□□□ -0.5
RFC3P1-201ENST00000454568 TULP1O00294 542 aaPredicted RBP11.92□□□□□ -0.5
RFC3P1-201ENST00000454568 WNT7BP56706 349 aa11.92□□□□□ -0.5
RFC3P1-201ENST00000454568 MAP2K5Q13163 448 aa11.92□□□□□ -0.5
RFC3P1-201ENST00000454568 COL18A1P39060 1754 aa11.92□□□□□ -0.5
RFC3P1-201ENST00000454568 CDCA8Q53HL2 280 aa11.91□□□□□ -0.5
RFC3P1-201ENST00000454568 CCER1Q8TC90 406 aaPredicted RBP11.91□□□□□ -0.5
RFC3P1-201ENST00000454568 COG3Q96JB2 828 aa11.91□□□□□ -0.5
RFC3P1-201ENST00000454568 CARD10Q9BWT7 1032 aa11.91□□□□□ -0.5
RFC3P1-201ENST00000454568 NLRP2Q9NX02 1062 aa11.91□□□□□ -0.5
RFC3P1-201ENST00000454568 PARP4Q9UKK3 1724 aaKnown RBP11.91□□□□□ -0.5
RFC3P1-201ENST00000454568 NINLQ9Y2I6 1382 aa11.91□□□□□ -0.5
RFC3P1-201ENST00000454568 CLSPNQ9HAW4 1339 aa11.9□□□□□ -0.5
RFC3P1-201ENST00000454568 J3QL48 77 aa11.9□□□□□ -0.5
RFC3P1-201ENST00000454568 EXOC5O00471 708 aa11.9□□□□□ -0.5
RFC3P1-201ENST00000454568 PLCB2Q00722 1185 aa11.9□□□□□ -0.5
RFC3P1-201ENST00000454568 CCDC24Q8N4L8 307 aa11.9□□□□□ -0.5
RFC3P1-201ENST00000454568 NFAT5O94916 1531 aa11.9□□□□□ -0.5
RFC3P1-201ENST00000454568 TNS1Q9HBL0 1735 aaKnown RBP11.89□□□□□ -0.51
RFC3P1-201ENST00000454568 OVOS2A0A0G2JMS6 1433 aa11.89□□□□□ -0.51
RFC3P1-201ENST00000454568 OVOS2A0A0J9YW53 1432 aa11.89□□□□□ -0.51
RFC3P1-201ENST00000454568 OVOS2Q6IE36 1432 aa11.89□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms