RNA–Protein interactions for RNA: ENST00000454137.5

MSH6-205, Transcript of mutS homolog 6, humanhuman

TSL 3

Gene MSH6, Length 725 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-205ENST00000454137 MPRIPQ6WCQ1 1025 aa7.64□□□□□ -1.19
MSH6-205ENST00000454137 CENPQQ7L2Z9 268 aaPredicted RBP7.64□□□□□ -1.19
MSH6-205ENST00000454137 GPIHBP1Q8IV16 184 aa7.64□□□□□ -1.19
MSH6-205ENST00000454137 BACH2Q9BYV9 841 aa7.64□□□□□ -1.19
MSH6-205ENST00000454137 DDX19BQ9UMR2 479 aa7.64□□□□□ -1.19
MSH6-205ENST00000454137 COG6Q9Y2V7 657 aa7.64□□□□□ -1.19
MSH6-205ENST00000454137 ITGB4P16144 1822 aa7.64□□□□□ -1.19
MSH6-205ENST00000454137 PXDNLA1KZ92 1463 aa7.63□□□□□ -1.19
MSH6-205ENST00000454137 TNS2Q63HR2 1409 aa7.63□□□□□ -1.19
MSH6-205ENST00000454137 ABCC4O15439 1325 aa7.63□□□□□ -1.19
MSH6-205ENST00000454137 SPATA31A5Q5VU36 1347 aa7.63□□□□□ -1.19
MSH6-205ENST00000454137 SPATA31A7Q8IWB4 1347 aa7.63□□□□□ -1.19
MSH6-205ENST00000454137 KDM2BQ8NHM5 1336 aa7.63□□□□□ -1.19
MSH6-205ENST00000454137 VPS72Q15906 364 aa7.63□□□□□ -1.19
MSH6-205ENST00000454137 UNC5CLQ8IV45 518 aa7.63□□□□□ -1.19
MSH6-205ENST00000454137 FBXO41Q8TF61 875 aa7.63□□□□□ -1.19
MSH6-205ENST00000454137 BCL11AQ9H165 835 aa7.63□□□□□ -1.19
MSH6-205ENST00000454137 STRN4Q9NRL3 753 aa7.63□□□□□ -1.19
MSH6-205ENST00000454137 EMILIN3Q9NT22 766 aa7.63□□□□□ -1.19
MSH6-205ENST00000454137 NOB1Q9ULX3 412 aaKnown RBP7.63□□□□□ -1.19
MSH6-205ENST00000454137 CICQ96RK0 1608 aaPredicted RBP7.63□□□□□ -1.19
MSH6-205ENST00000454137 BCL9LQ86UU0 1499 aa7.62□□□□□ -1.19
MSH6-205ENST00000454137 ERBB4Q15303 1308 aa7.62□□□□□ -1.19
MSH6-205ENST00000454137 TOGARAM1Q9Y4F4 1720 aa7.62□□□□□ -1.19
MSH6-205ENST00000454137 ELL2O00472 640 aaPredicted RBP7.62□□□□□ -1.19
MSH6-205ENST00000454137 INTS3Q68E01 1043 aaKnown RBP7.62□□□□□ -1.19
MSH6-205ENST00000454137 ZNF790Q6PG37 636 aa7.62□□□□□ -1.19
MSH6-205ENST00000454137 PLPP6Q8IY26 295 aa7.62□□□□□ -1.19
MSH6-205ENST00000454137 FTSJ3Q8IY81 847 aaKnown RBP7.62□□□□□ -1.19
MSH6-205ENST00000454137 CLUAP1Q96AJ1 413 aa7.62□□□□□ -1.19
MSH6-205ENST00000454137 DDRGK1Q96HY6 314 aa7.62□□□□□ -1.19
MSH6-205ENST00000454137 STK31Q9BXU1 1019 aa7.62□□□□□ -1.19
MSH6-205ENST00000454137 ZNF831Q5JPB2 1677 aa7.62□□□□□ -1.19
MSH6-205ENST00000454137 RGS12O14924 1447 aa7.61□□□□□ -1.19
MSH6-205ENST00000454137 EXOC5O00471 708 aa7.61□□□□□ -1.19
MSH6-205ENST00000454137 KIF3CO14782 793 aa7.61□□□□□ -1.19
MSH6-205ENST00000454137 GIGYF1O75420 1035 aaPredicted RBP7.61□□□□□ -1.19
MSH6-205ENST00000454137 MLLT3P42568 568 aaPredicted RBP7.61□□□□□ -1.19
MSH6-205ENST00000454137 CABP4P57796 275 aa7.61□□□□□ -1.19
MSH6-205ENST00000454137 KRT24Q2M2I5 525 aa7.61□□□□□ -1.19
MSH6-205ENST00000454137 RTL5Q5HYW3 569 aaPredicted RBP7.61□□□□□ -1.19
MSH6-205ENST00000454137 NFATC2IPQ8NCF5 419 aa7.61□□□□□ -1.19
MSH6-205ENST00000454137 AK7Q96M32 723 aa7.61□□□□□ -1.19
MSH6-205ENST00000454137 MIS18AQ9NYP9 233 aa7.61□□□□□ -1.19
MSH6-205ENST00000454137 DBF4Q9UBU7 674 aaPredicted RBP7.61□□□□□ -1.19
MSH6-205ENST00000454137 GLI3P10071 1580 aa7.61□□□□□ -1.19
MSH6-205ENST00000454137 BCL9O00512 1426 aa7.61□□□□□ -1.19
MSH6-205ENST00000454137 THSD7AQ9UPZ6 1657 aa7.6□□□□□ -1.19
MSH6-205ENST00000454137 C2orf72A6NCS6 295 aa7.6□□□□□ -1.19
MSH6-205ENST00000454137 ADAMTS2O95450 1211 aa7.6□□□□□ -1.19
MSH6-205ENST00000454137 SNRPA1P09661 255 aaKnown RBP7.6□□□□□ -1.19
MSH6-205ENST00000454137 MAP3K9P80192 1104 aa7.6□□□□□ -1.19
MSH6-205ENST00000454137 RBM26Q5T8P6 1007 aaKnown RBP7.6□□□□□ -1.19
MSH6-205ENST00000454137 HDGFL1Q5TGJ6 251 aa7.6□□□□□ -1.19
MSH6-205ENST00000454137 TMEM57Q8N5G2 664 aa7.6□□□□□ -1.19
MSH6-205ENST00000454137 FMNL2Q96PY5 1086 aa7.6□□□□□ -1.19
MSH6-205ENST00000454137 C5P01031 1676 aa7.6□□□□□ -1.19
MSH6-205ENST00000454137 KCPQ6ZWJ8 1503 aa7.59□□□□□ -1.19
MSH6-205ENST00000454137 ONECUT3O60422 494 aaPredicted RBP7.59□□□□□ -1.19
MSH6-205ENST00000454137 DEKP35659 375 aaKnown RBP7.59□□□□□ -1.19
MSH6-205ENST00000454137 CCT4P50991 539 aaKnown RBP7.59□□□□□ -1.19
MSH6-205ENST00000454137 EVX2Q03828 476 aa7.59□□□□□ -1.19
MSH6-205ENST00000454137 TTC5Q8N0Z6 440 aa7.59□□□□□ -1.19
MSH6-205ENST00000454137 KRI1Q8N9T8 703 aaKnown RBP7.59□□□□□ -1.19
MSH6-205ENST00000454137 TEX13AQ9BXU3 409 aaPredicted RBP7.59□□□□□ -1.19
MSH6-205ENST00000454137 ZBTB40Q9NUA8 1239 aa7.59□□□□□ -1.19
MSH6-205ENST00000454137 HYPKQ9NX55 129 aa7.59□□□□□ -1.19
MSH6-205ENST00000454137 PCDHB15Q9Y5E8 787 aa7.59□□□□□ -1.19
MSH6-205ENST00000454137 ATP10DQ9P241 1426 aa7.59□□□□□ -1.19
MSH6-205ENST00000454137 NUTM2BA6NNL0 878 aaPredicted RBP7.58□□□□□ -1.2
MSH6-205ENST00000454137 NUTM2EB1AL46 878 aaPredicted RBP7.58□□□□□ -1.2
MSH6-205ENST00000454137 ZBTB7BO15156 539 aaPredicted RBP7.58□□□□□ -1.2
MSH6-205ENST00000454137 SEC24BO95487 1268 aa7.58□□□□□ -1.2
MSH6-205ENST00000454137 IGHDP01880 384 aa7.58□□□□□ -1.2
MSH6-205ENST00000454137 HSPA1LP34931 641 aa7.58□□□□□ -1.2
MSH6-205ENST00000454137 FLIIQ13045 1269 aa7.58□□□□□ -1.2
MSH6-205ENST00000454137 HDAC1Q13547 482 aaPredicted RBP7.58□□□□□ -1.2
MSH6-205ENST00000454137 DDB1Q16531 1140 aa7.58□□□□□ -1.2
MSH6-205ENST00000454137 NPM2Q86SE8 214 aaKnown RBP7.58□□□□□ -1.2
MSH6-205ENST00000454137 NUTM2AQ8IVF1 878 aaPredicted RBP7.58□□□□□ -1.2
MSH6-205ENST00000454137 NGLY1Q96IV0 654 aa7.58□□□□□ -1.2
MSH6-205ENST00000454137 DDX21Q9NR30 783 aaKnown RBP eCLIP7.58□□□□□ -1.2
MSH6-205ENST00000454137 USP35Q9P2H5 1018 aa7.58□□□□□ -1.2
MSH6-205ENST00000454137 ATRNO75882 1429 aa7.58□□□□□ -1.2
MSH6-205ENST00000454137 DOT1LQ8TEK3 1739 aa7.58□□□□□ -1.2
MSH6-205ENST00000454137 KCNQ3O43525 872 aa7.57□□□□□ -1.2
MSH6-205ENST00000454137 FAM161AQ3B820 660 aa7.57□□□□□ -1.2
MSH6-205ENST00000454137 ITPRIPQ8IWB1 547 aa7.57□□□□□ -1.2
MSH6-205ENST00000454137 DDX54Q8TDD1 881 aaKnown RBP7.57□□□□□ -1.2
MSH6-205ENST00000454137 ZNF496Q96IT1 587 aaPredicted RBP7.57□□□□□ -1.2
MSH6-205ENST00000454137 DCBLD2Q96PD2 775 aa7.57□□□□□ -1.2
MSH6-205ENST00000454137 RWDD1Q9H446 243 aaPredicted RBP7.57□□□□□ -1.2
MSH6-205ENST00000454137 TMOD3Q9NYL9 352 aa7.57□□□□□ -1.2
MSH6-205ENST00000454137 TBC1D12O60347 775 aa7.56□□□□□ -1.2
MSH6-205ENST00000454137 SKAP1Q86WV1 359 aa7.56□□□□□ -1.2
MSH6-205ENST00000454137 USP21Q9UK80 565 aa7.56□□□□□ -1.2
MSH6-205ENST00000454137 HDAC5Q9UQL6 1122 aa7.56□□□□□ -1.2
MSH6-205ENST00000454137 KAT6BQ8WYB5 2073 aa7.56□□□□□ -1.2
MSH6-205ENST00000454137 RREB1Q92766 1687 aa7.55□□□□□ -1.2
MSH6-205ENST00000454137 ALDH1L1O75891 902 aa7.55□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms