RNA–Protein interactions for RNA: ENST00000453847.2

HMGN3P1-201, Transcript of high mobility group nucleosomal binding domain 3 pseudogene 1, humanhuman

BASIC

Gene HMGN3P1, Length 193 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN3P1-201ENST00000453847 VTI1BQ9UEU0 232 aa6.51□□□□□ -1.37
HMGN3P1-201ENST00000453847 CADPSQ9ULU8 1353 aa6.51□□□□□ -1.37
HMGN3P1-201ENST00000453847 OPLAHO14841 1288 aa6.5□□□□□ -1.37
HMGN3P1-201ENST00000453847 GNA15P30679 374 aa6.5□□□□□ -1.37
HMGN3P1-201ENST00000453847 TXLNAP40222 546 aa6.5□□□□□ -1.37
HMGN3P1-201ENST00000453847 PTGIRP43119 386 aa6.5□□□□□ -1.37
HMGN3P1-201ENST00000453847 TNNI2P48788 182 aa6.5□□□□□ -1.37
HMGN3P1-201ENST00000453847 FGD1P98174 961 aa6.5□□□□□ -1.37
HMGN3P1-201ENST00000453847 SF3A1Q15459 793 aaKnown RBP6.5□□□□□ -1.37
HMGN3P1-201ENST00000453847 ALG1LQ6GMV1 187 aa6.5□□□□□ -1.37
HMGN3P1-201ENST00000453847 SLC43A3Q8NBI5 491 aa6.5□□□□□ -1.37
HMGN3P1-201ENST00000453847 GPR152Q8TDT2 470 aa6.5□□□□□ -1.37
HMGN3P1-201ENST00000453847 AGBL1Q96MI9 1066 aa6.5□□□□□ -1.37
HMGN3P1-201ENST00000453847 MRS2Q9HD23 443 aa6.5□□□□□ -1.37
HMGN3P1-201ENST00000453847 PGPEP1Q9NXJ5 209 aa6.5□□□□□ -1.37
HMGN3P1-201ENST00000453847 CABP1Q9NZU7 370 aa6.5□□□□□ -1.37
HMGN3P1-201ENST00000453847 AK5Q9Y6K8 562 aa6.5□□□□□ -1.37
HMGN3P1-201ENST00000453847 EIF1AYO14602 144 aaKnown RBP6.49□□□□□ -1.37
HMGN3P1-201ENST00000453847 SMARCA5O60264 1052 aaPredicted RBP6.49□□□□□ -1.37
HMGN3P1-201ENST00000453847 TREML1Q86YW5 311 aa6.49□□□□□ -1.37
HMGN3P1-201ENST00000453847 TRIM52Q96A61 297 aa6.49□□□□□ -1.37
HMGN3P1-201ENST00000453847 NUDT16Q96DE0 195 aaKnown RBP6.49□□□□□ -1.37
HMGN3P1-201ENST00000453847 ZNF232Q9UNY5 417 aa6.49□□□□□ -1.37
HMGN3P1-201ENST00000453847 ZNF76P36508 570 aa6.48□□□□□ -1.37
HMGN3P1-201ENST00000453847 GGCXP38435 758 aa6.48□□□□□ -1.37
HMGN3P1-201ENST00000453847 USP5P45974 858 aa6.48□□□□□ -1.37
HMGN3P1-201ENST00000453847 RACK1P63244 317 aaKnown RBP6.48□□□□□ -1.37
HMGN3P1-201ENST00000453847 ATP2B2Q01814 1243 aa6.48□□□□□ -1.37
HMGN3P1-201ENST00000453847 C1orf53Q5VUE5 145 aa6.48□□□□□ -1.37
HMGN3P1-201ENST00000453847 ITPKCQ96DU7 683 aa6.48□□□□□ -1.37
HMGN3P1-201ENST00000453847 BCL11AQ9H165 835 aa6.48□□□□□ -1.37
HMGN3P1-201ENST00000453847 DMGDHQ9UI17 866 aaKnown RBP6.48□□□□□ -1.37
HMGN3P1-201ENST00000453847 NNTQ13423 1086 aa6.47□□□□□ -1.37
HMGN3P1-201ENST00000453847 USPL1Q5W0Q7 1092 aa6.47□□□□□ -1.37
HMGN3P1-201ENST00000453847 GIMAP6Q6P9H5 292 aa6.47□□□□□ -1.37
HMGN3P1-201ENST00000453847 PI16Q6UXB8 463 aa6.47□□□□□ -1.37
HMGN3P1-201ENST00000453847 DPH6Q7L8W6 267 aa6.47□□□□□ -1.37
HMGN3P1-201ENST00000453847 SPATA32Q96LK8 384 aa6.47□□□□□ -1.37
HMGN3P1-201ENST00000453847 GRIP2Q9C0E4 1043 aa6.47□□□□□ -1.37
HMGN3P1-201ENST00000453847 SRA1Q9HD15 236 aaKnown RBP6.47□□□□□ -1.37
HMGN3P1-201ENST00000453847 DDX41Q9UJV9 622 aaKnown RBP6.47□□□□□ -1.37
HMGN3P1-201ENST00000453847 EPB41L3Q9Y2J2 1087 aaPredicted RBP6.47□□□□□ -1.37
HMGN3P1-201ENST00000453847 CHMP3Q9Y3E7 222 aa6.47□□□□□ -1.37
HMGN3P1-201ENST00000453847 MEN1O00255 615 aa6.46□□□□□ -1.38
HMGN3P1-201ENST00000453847 MICAL2O94851 1124 aa6.46□□□□□ -1.38
HMGN3P1-201ENST00000453847 ZNF394Q53GI3 561 aa6.46□□□□□ -1.38
HMGN3P1-201ENST00000453847 NBPF15Q8N660 670 aa6.46□□□□□ -1.38
HMGN3P1-201ENST00000453847 FBF1Q8TES7 1133 aa6.46□□□□□ -1.38
HMGN3P1-201ENST00000453847 DHX38Q92620 1227 aaKnown RBP6.46□□□□□ -1.38
HMGN3P1-201ENST00000453847 ZSCAN10Q96SZ4 725 aaPredicted RBP6.46□□□□□ -1.38
HMGN3P1-201ENST00000453847 GMLQ99445 158 aa6.46□□□□□ -1.38
HMGN3P1-201ENST00000453847 NIFKQ9BYG3 293 aaKnown RBP6.46□□□□□ -1.38
HMGN3P1-201ENST00000453847 OSBPL7Q9BZF2 842 aa6.46□□□□□ -1.38
HMGN3P1-201ENST00000453847 TANGO6Q9C0B7 1094 aa6.46□□□□□ -1.38
HMGN3P1-201ENST00000453847 ZNF395Q9H8N7 513 aaPredicted RBP6.46□□□□□ -1.38
HMGN3P1-201ENST00000453847 ZFAND3Q9H8U3 227 aa6.46□□□□□ -1.38
HMGN3P1-201ENST00000453847 CAPN10Q9HC96 672 aa6.46□□□□□ -1.38
HMGN3P1-201ENST00000453847 PRKAG2Q9UGJ0 569 aa6.46□□□□□ -1.38
HMGN3P1-201ENST00000453847 ALDH1A1P00352 501 aa6.45□□□□□ -1.38
HMGN3P1-201ENST00000453847 HSP90B1P14625 803 aaKnown RBP6.45□□□□□ -1.38
HMGN3P1-201ENST00000453847 C8orf34Q49A92 452 aa6.45□□□□□ -1.38
HMGN3P1-201ENST00000453847 CDAN1Q8IWY9 1227 aa6.45□□□□□ -1.38
HMGN3P1-201ENST00000453847 ZNF280CQ8ND82 737 aa6.45□□□□□ -1.38
HMGN3P1-201ENST00000453847 DNAJC25Q9H1X3 360 aa6.45□□□□□ -1.38
HMGN3P1-201ENST00000453847 PKD2L1Q9P0L9 805 aa6.45□□□□□ -1.38
HMGN3P1-201ENST00000453847 USP20Q9Y2K6 914 aa6.45□□□□□ -1.38
HMGN3P1-201ENST00000453847 GRNP28799 593 aaKnown RBP6.44□□□□□ -1.38
HMGN3P1-201ENST00000453847 IRS1P35568 1242 aa6.44□□□□□ -1.38
HMGN3P1-201ENST00000453847 SLC19A1P41440 591 aa6.44□□□□□ -1.38
HMGN3P1-201ENST00000453847 RELBQ01201 579 aa6.44□□□□□ -1.38
HMGN3P1-201ENST00000453847 PTPN12Q05209 780 aaKnown RBP6.44□□□□□ -1.38
HMGN3P1-201ENST00000453847 LARP7Q4G0J3 582 aaKnown RBP eCLIP6.44□□□□□ -1.38
HMGN3P1-201ENST00000453847 C4orf17Q53FE4 359 aa6.44□□□□□ -1.38
HMGN3P1-201ENST00000453847 EPS8L3Q8TE67 593 aaKnown RBP6.44□□□□□ -1.38
HMGN3P1-201ENST00000453847 CRELD1Q96HD1 420 aa6.44□□□□□ -1.38
HMGN3P1-201ENST00000453847 FRMD6Q96NE9 622 aa6.44□□□□□ -1.38
HMGN3P1-201ENST00000453847 DNAJC2Q99543 621 aaKnown RBP6.44□□□□□ -1.38
HMGN3P1-201ENST00000453847 LNPKQ9C0E8 428 aa6.44□□□□□ -1.38
HMGN3P1-201ENST00000453847 CCSER2Q9H7U1 834 aa6.44□□□□□ -1.38
HMGN3P1-201ENST00000453847 FOXD3Q9UJU5 478 aaPredicted RBP6.44□□□□□ -1.38
HMGN3P1-201ENST00000453847 PCDHGB7Q9Y5F8 929 aa6.44□□□□□ -1.38
HMGN3P1-201ENST00000453847 USP31Q70CQ4 1352 aa6.44□□□□□ -1.38
HMGN3P1-201ENST00000453847 ZIC2O95409 532 aaPredicted RBP6.43□□□□□ -1.38
HMGN3P1-201ENST00000453847 TIMP2P16035 220 aa6.43□□□□□ -1.38
HMGN3P1-201ENST00000453847 SPRYD7Q5W111 196 aa6.43□□□□□ -1.38
HMGN3P1-201ENST00000453847 XKR5Q6UX68 686 aa6.43□□□□□ -1.38
HMGN3P1-201ENST00000453847 RHBDD1Q8TEB9 315 aa6.43□□□□□ -1.38
HMGN3P1-201ENST00000453847 SUSD3Q96L08 255 aa6.43□□□□□ -1.38
HMGN3P1-201ENST00000453847 NLRP3Q96P20 1036 aa6.43□□□□□ -1.38
HMGN3P1-201ENST00000453847 HCSTQ9UBK5 93 aa6.43□□□□□ -1.38
HMGN3P1-201ENST00000453847 J3QL48 77 aa6.42□□□□□ -1.38
HMGN3P1-201ENST00000453847 CPNE3O75131 537 aaKnown RBP6.42□□□□□ -1.38
HMGN3P1-201ENST00000453847 TNFRSF21O75509 655 aa6.42□□□□□ -1.38
HMGN3P1-201ENST00000453847 RBL2Q08999 1139 aa6.42□□□□□ -1.38
HMGN3P1-201ENST00000453847 TRIP4Q15650 581 aaPredicted RBP6.42□□□□□ -1.38
HMGN3P1-201ENST00000453847 MEI1Q5TIA1 1274 aa6.42□□□□□ -1.38
HMGN3P1-201ENST00000453847 TMEM214Q6NUQ4 689 aaKnown RBP6.42□□□□□ -1.38
HMGN3P1-201ENST00000453847 CCDC74AQ96AQ1 378 aa6.42□□□□□ -1.38
HMGN3P1-201ENST00000453847 ZFYVE28Q9HCC9 887 aa6.42□□□□□ -1.38
HMGN3P1-201ENST00000453847 NLRP2Q9NX02 1062 aa6.42□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms