RNA–Protein interactions for RNA: ENST00000453555.1

CDC42EP3-203, Transcript of CDC42 effector protein 3, humanhuman

TSL 3

Gene CDC42EP3, Length 953 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP3-203ENST00000453555 NEUROD2Q15784 382 aa12.47□□□□□ -0.41
CDC42EP3-203ENST00000453555 NARFQ9UHQ1 456 aa12.47□□□□□ -0.41
CDC42EP3-203ENST00000453555 ADAMTS8Q9UP79 889 aa12.47□□□□□ -0.41
CDC42EP3-203ENST00000453555 SCN7AQ01118 1682 aa12.46□□□□□ -0.41
CDC42EP3-203ENST00000453555 MAP3K13O43283 966 aa12.46□□□□□ -0.41
CDC42EP3-203ENST00000453555 SNRPA1P09661 255 aaKnown RBP12.46□□□□□ -0.41
CDC42EP3-203ENST00000453555 TMPOP42166 694 aaKnown RBP12.46□□□□□ -0.41
CDC42EP3-203ENST00000453555 EIF5P55010 431 aaKnown RBP12.46□□□□□ -0.41
CDC42EP3-203ENST00000453555 DDR1Q08345 913 aa12.46□□□□□ -0.41
CDC42EP3-203ENST00000453555 BCL2L12Q9HB09 334 aa12.46□□□□□ -0.41
CDC42EP3-203ENST00000453555 BCORQ6W2J9 1755 aa12.46□□□□□ -0.42
CDC42EP3-203ENST00000453555 C10orf71Q711Q0 1435 aa12.45□□□□□ -0.42
CDC42EP3-203ENST00000453555 BRCA1P38398 1863 aaKnown RBP12.45□□□□□ -0.42
CDC42EP3-203ENST00000453555 A0A087WZG4 1122 aa12.45□□□□□ -0.42
CDC42EP3-203ENST00000453555 A0A0G2JLW4 131 aa12.45□□□□□ -0.42
CDC42EP3-203ENST00000453555 TM4SF1P30408 202 aa12.45□□□□□ -0.42
CDC42EP3-203ENST00000453555 IL6STP40189 918 aaPredicted RBP12.45□□□□□ -0.42
CDC42EP3-203ENST00000453555 VASPP50552 380 aaPredicted RBP12.45□□□□□ -0.42
CDC42EP3-203ENST00000453555 PNISRQ8TF01 805 aaKnown RBP12.45□□□□□ -0.42
CDC42EP3-203ENST00000453555 RUNDC1Q96C34 613 aa12.45□□□□□ -0.42
CDC42EP3-203ENST00000453555 TBC1D2BQ9UPU7 963 aa12.45□□□□□ -0.42
CDC42EP3-203ENST00000453555 POLRMTO00411 1230 aaKnown RBP12.44□□□□□ -0.42
CDC42EP3-203ENST00000453555 NFIXQ14938 502 aa12.44□□□□□ -0.42
CDC42EP3-203ENST00000453555 BICDL1Q6ZP65 573 aa12.44□□□□□ -0.42
CDC42EP3-203ENST00000453555 NPM2Q86SE8 214 aaKnown RBP12.44□□□□□ -0.42
CDC42EP3-203ENST00000453555 NRXN2Q9P2S2 1712 aa12.44□□□□□ -0.42
CDC42EP3-203ENST00000453555 PXDNLA1KZ92 1463 aa12.44□□□□□ -0.42
CDC42EP3-203ENST00000453555 GRIN3BO60391 1043 aa12.43□□□□□ -0.42
CDC42EP3-203ENST00000453555 EIF4A1P60842 406 aaKnown RBP12.43□□□□□ -0.42
CDC42EP3-203ENST00000453555 TGFB2P61812 414 aa12.43□□□□□ -0.42
CDC42EP3-203ENST00000453555 CCDC184Q52MB2 194 aa12.43□□□□□ -0.42
CDC42EP3-203ENST00000453555 ASTLQ6HA08 431 aaPredicted RBP12.43□□□□□ -0.42
CDC42EP3-203ENST00000453555 ATMINO43313 823 aaPredicted RBP12.42□□□□□ -0.42
CDC42EP3-203ENST00000453555 SERPINB2P05120 415 aa12.42□□□□□ -0.42
CDC42EP3-203ENST00000453555 DPEP1P16444 411 aa12.42□□□□□ -0.42
CDC42EP3-203ENST00000453555 LMOD3Q0VAK6 560 aa12.42□□□□□ -0.42
CDC42EP3-203ENST00000453555 TBC1D9BQ66K14 1250 aa12.42□□□□□ -0.42
CDC42EP3-203ENST00000453555 DZIP3Q86Y13 1208 aaKnown RBP12.42□□□□□ -0.42
CDC42EP3-203ENST00000453555 FAM212AQ96EL1 285 aa12.42□□□□□ -0.42
CDC42EP3-203ENST00000453555 TSPYL4Q9UJ04 414 aa12.42□□□□□ -0.42
CDC42EP3-203ENST00000453555 NBPF26B4DH59 902 aa12.41□□□□□ -0.42
CDC42EP3-203ENST00000453555 GIGYF1O75420 1035 aaPredicted RBP12.41□□□□□ -0.42
CDC42EP3-203ENST00000453555 NBPF10Q6P3W6 841 aaKnown RBP12.41□□□□□ -0.42
CDC42EP3-203ENST00000453555 NBPF15Q8N660 670 aa12.41□□□□□ -0.42
CDC42EP3-203ENST00000453555 TRIM35Q9UPQ4 493 aa12.41□□□□□ -0.42
CDC42EP3-203ENST00000453555 TRPC6Q9Y210 931 aa12.41□□□□□ -0.42
CDC42EP3-203ENST00000453555 LAS1LQ9Y4W2 734 aaKnown RBP12.41□□□□□ -0.42
CDC42EP3-203ENST00000453555 NUP98P52948 1817 aa12.41□□□□□ -0.42
CDC42EP3-203ENST00000453555 ARFGEF1Q9Y6D6 1849 aa12.41□□□□□ -0.42
CDC42EP3-203ENST00000453555 ANKRD31Q8N7Z5 1873 aa12.4□□□□□ -0.42
CDC42EP3-203ENST00000453555 ANP32CO43423 234 aa12.4□□□□□ -0.42
CDC42EP3-203ENST00000453555 CAMTA2O94983 1202 aa12.4□□□□□ -0.42
CDC42EP3-203ENST00000453555 CHRNA5P30532 468 aa12.4□□□□□ -0.42
CDC42EP3-203ENST00000453555 NGEFQ8N5V2 710 aa12.4□□□□□ -0.42
CDC42EP3-203ENST00000453555 BCS1LQ9Y276 419 aa12.4□□□□□ -0.42
CDC42EP3-203ENST00000453555 UTRNP46939 3433 aa12.4□□□□□ -0.42
CDC42EP3-203ENST00000453555 DLEC1Q9Y238 1755 aa12.39□□□□□ -0.43
CDC42EP3-203ENST00000453555 APAF1O14727 1248 aa12.39□□□□□ -0.43
CDC42EP3-203ENST00000453555 CACNA1SQ13698 1873 aa12.39□□□□□ -0.43
CDC42EP3-203ENST00000453555 GOLGB1Q14789 3259 aaKnown RBP12.38□□□□□ -0.43
CDC42EP3-203ENST00000453555 SENP3-EIF4A1A0A087X0R7 540 aa12.38□□□□□ -0.43
CDC42EP3-203ENST00000453555 MYL6BP14649 208 aa12.38□□□□□ -0.43
CDC42EP3-203ENST00000453555 KCNA3P22001 575 aa12.38□□□□□ -0.43
CDC42EP3-203ENST00000453555 CCDC24Q8N4L8 307 aa12.38□□□□□ -0.43
CDC42EP3-203ENST00000453555 CARMIL3Q8ND23 1372 aa12.38□□□□□ -0.43
CDC42EP3-203ENST00000453555 EIF2S2P20042 333 aaKnown RBP12.37□□□□□ -0.43
CDC42EP3-203ENST00000453555 ZNF784Q8NCA9 323 aaPredicted RBP12.37□□□□□ -0.43
CDC42EP3-203ENST00000453555 SETDB2Q96T68 719 aa12.37□□□□□ -0.43
CDC42EP3-203ENST00000453555 BABAM1Q9NWV8 329 aa12.37□□□□□ -0.43
CDC42EP3-203ENST00000453555 PIM2Q9P1W9 311 aa12.37□□□□□ -0.43
CDC42EP3-203ENST00000453555 NPHP1O15259 732 aa12.36□□□□□ -0.43
CDC42EP3-203ENST00000453555 ATN1P54259 1190 aaPredicted RBP12.36□□□□□ -0.43
CDC42EP3-203ENST00000453555 HLFQ16534 295 aa12.36□□□□□ -0.43
CDC42EP3-203ENST00000453555 KRT24Q2M2I5 525 aa12.36□□□□□ -0.43
CDC42EP3-203ENST00000453555 NECTIN2Q92692 538 aa12.36□□□□□ -0.43
CDC42EP3-203ENST00000453555 MRS2Q9HD23 443 aa12.36□□□□□ -0.43
CDC42EP3-203ENST00000453555 COL11A2P13942 1736 aaPredicted RBP12.36□□□□□ -0.43
CDC42EP3-203ENST00000453555 FAM177BA6PVY3 158 aa12.35□□□□□ -0.43
CDC42EP3-203ENST00000453555 CHL1O00533 1208 aa12.35□□□□□ -0.43
CDC42EP3-203ENST00000453555 DALRD3Q5D0E6 543 aaKnown RBP12.35□□□□□ -0.43
CDC42EP3-203ENST00000453555 PRR5LQ6MZQ0 368 aa12.35□□□□□ -0.43
CDC42EP3-203ENST00000453555 TTLL7Q6ZT98 887 aa12.35□□□□□ -0.43
CDC42EP3-203ENST00000453555 ARHGAP27Q6ZUM4 889 aa12.35□□□□□ -0.43
CDC42EP3-203ENST00000453555 C2CD5Q86YS7 1000 aa12.35□□□□□ -0.43
CDC42EP3-203ENST00000453555 BMP2KQ9NSY1 1161 aaPredicted RBP12.35□□□□□ -0.43
CDC42EP3-203ENST00000453555 ZNF652Q9Y2D9 606 aa12.35□□□□□ -0.43
CDC42EP3-203ENST00000453555 CCDC88AQ3V6T2 1871 aa12.35□□□□□ -0.43
CDC42EP3-203ENST00000453555 POTEB2H3BUK9 544 aa12.34□□□□□ -0.43
CDC42EP3-203ENST00000453555 ANXA1P04083 346 aa12.34□□□□□ -0.43
CDC42EP3-203ENST00000453555 CLEC4GQ6UXB4 293 aa12.34□□□□□ -0.43
CDC42EP3-203ENST00000453555 CNBD1Q8NA66 436 aa12.34□□□□□ -0.43
CDC42EP3-203ENST00000453555 NIP7Q9Y221 180 aaKnown RBP eCLIP12.34□□□□□ -0.43
CDC42EP3-203ENST00000453555 PCDHB13Q9Y5F0 798 aa12.34□□□□□ -0.43
CDC42EP3-203ENST00000453555 SBF1O95248 1867 aa12.34□□□□□ -0.43
CDC42EP3-203ENST00000453555 H0YIN7 160 aa12.33□□□□□ -0.44
CDC42EP3-203ENST00000453555 DCAF8Q5TAQ9 597 aa12.33□□□□□ -0.44
CDC42EP3-203ENST00000453555 KIF6Q6ZMV9 814 aa12.33□□□□□ -0.44
CDC42EP3-203ENST00000453555 NBPF5PQ86XG9 351 aaPredicted RBP12.33□□□□□ -0.44
CDC42EP3-203ENST00000453555 CFAP44Q96MT7 982 aa12.33□□□□□ -0.44
CDC42EP3-203ENST00000453555 ZBTB3Q9H5J0 574 aa12.33□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms