RNA–Protein interactions for RNA: ENST00000452950.1

CSTF1-204, Transcript of cleavage stimulation factor subunit 1, humanhuman

TSL 3

Gene CSTF1, Length 1,233 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSTF1-204ENST00000452950 ARAP1Q96P48 1450 aa9.4□□□□□ -0.91
CSTF1-204ENST00000452950 TLDC2A0PJX2 215 aa9.39□□□□□ -0.91
CSTF1-204ENST00000452950 ESPNB1AK53 854 aa9.39□□□□□ -0.91
CSTF1-204ENST00000452950 DNAJA1P31689 397 aaKnown RBP9.39□□□□□ -0.91
CSTF1-204ENST00000452950 EIF1AXP47813 144 aaKnown RBP9.39□□□□□ -0.91
CSTF1-204ENST00000452950 LCE2AQ5TA79 106 aaPredicted RBP9.39□□□□□ -0.91
CSTF1-204ENST00000452950 GMLQ99445 158 aa9.39□□□□□ -0.91
CSTF1-204ENST00000452950 CCDC87Q9NVE4 849 aa9.39□□□□□ -0.91
CSTF1-204ENST00000452950 EPB41L3Q9Y2J2 1087 aaPredicted RBP9.39□□□□□ -0.91
CSTF1-204ENST00000452950 FZD6O60353 706 aa9.38□□□□□ -0.91
CSTF1-204ENST00000452950 ALKBH8Q96BT7 664 aaKnown RBP9.38□□□□□ -0.91
CSTF1-204ENST00000452950 FAM129BQ96TA1 746 aa9.38□□□□□ -0.91
CSTF1-204ENST00000452950 WWC3Q9ULE0 1092 aa9.38□□□□□ -0.91
CSTF1-204ENST00000452950 GPR182O15218 404 aa9.37□□□□□ -0.91
CSTF1-204ENST00000452950 TNNI2P48788 182 aa9.37□□□□□ -0.91
CSTF1-204ENST00000452950 KIFC2Q96AC6 838 aa9.37□□□□□ -0.91
CSTF1-204ENST00000452950 ATAD2Q6PL18 1390 aa9.37□□□□□ -0.91
CSTF1-204ENST00000452950 BACH1O14867 736 aa9.36□□□□□ -0.91
CSTF1-204ENST00000452950 IGHA2P01877 340 aa9.36□□□□□ -0.91
CSTF1-204ENST00000452950 BMP1P13497 986 aa9.36□□□□□ -0.91
CSTF1-204ENST00000452950 NNTQ13423 1086 aa9.36□□□□□ -0.91
CSTF1-204ENST00000452950 ARID5BQ14865 1188 aa9.36□□□□□ -0.91
CSTF1-204ENST00000452950 C4orf48Q5BLP8 95 aa9.36□□□□□ -0.91
CSTF1-204ENST00000452950 ALG1LQ6GMV1 187 aa9.36□□□□□ -0.91
CSTF1-204ENST00000452950 TRIM46Q7Z4K8 759 aa9.36□□□□□ -0.91
CSTF1-204ENST00000452950 PMFBP1Q8TBY8 1022 aa9.36□□□□□ -0.91
CSTF1-204ENST00000452950 SAP130Q9H0E3 1048 aa9.36□□□□□ -0.91
CSTF1-204ENST00000452950 CDV3Q9UKY7 258 aaKnown RBP9.36□□□□□ -0.91
CSTF1-204ENST00000452950 TMEM229AB2RXF0 380 aa9.35□□□□□ -0.91
CSTF1-204ENST00000452950 WFS1O76024 890 aa9.35□□□□□ -0.91
CSTF1-204ENST00000452950 CHMP7Q8WUX9 453 aaPredicted RBP9.35□□□□□ -0.91
CSTF1-204ENST00000452950 STIM2Q9P246 746 aa9.35□□□□□ -0.91
CSTF1-204ENST00000452950 ARID5AQ03989 594 aa9.34□□□□□ -0.91
CSTF1-204ENST00000452950 ENOX2Q16206 610 aaKnown RBP9.34□□□□□ -0.91
CSTF1-204ENST00000452950 SOGA3Q5TF21 947 aa9.34□□□□□ -0.91
CSTF1-204ENST00000452950 SDE2Q6IQ49 451 aa9.34□□□□□ -0.91
CSTF1-204ENST00000452950 TNS4Q8IZW8 715 aa9.34□□□□□ -0.91
CSTF1-204ENST00000452950 CDK15Q96Q40 435 aa9.34□□□□□ -0.91
CSTF1-204ENST00000452950 SETDB2Q96T68 719 aa9.34□□□□□ -0.91
CSTF1-204ENST00000452950 CYLDQ9NQC7 956 aa9.34□□□□□ -0.91
CSTF1-204ENST00000452950 WDR3Q9UNX4 943 aaKnown RBP eCLIP9.34□□□□□ -0.91
CSTF1-204ENST00000452950 INPP5FQ9Y2H2 1132 aa9.34□□□□□ -0.91
CSTF1-204ENST00000452950 EMILIN1Q9Y6C2 1016 aa9.34□□□□□ -0.91
CSTF1-204ENST00000452950 PNMA6FA0A0J9YX94 578 aa9.33□□□□□ -0.92
CSTF1-204ENST00000452950 ADH1CP00326 375 aa9.33□□□□□ -0.92
CSTF1-204ENST00000452950 GNA15P30679 374 aa9.33□□□□□ -0.92
CSTF1-204ENST00000452950 NFX1Q12986 1120 aaKnown RBP9.33□□□□□ -0.92
CSTF1-204ENST00000452950 NIF3L1Q9GZT8 377 aa9.33□□□□□ -0.92
CSTF1-204ENST00000452950 TSPAN10Q9H1Z9 355 aaPredicted RBP9.33□□□□□ -0.92
CSTF1-204ENST00000452950 ESF1Q9H501 851 aaKnown RBP9.33□□□□□ -0.92
CSTF1-204ENST00000452950 ZSWIM4Q9H7M6 989 aa9.33□□□□□ -0.92
CSTF1-204ENST00000452950 RAB15P59190 212 aa9.32□□□□□ -0.92
CSTF1-204ENST00000452950 RBL2Q08999 1139 aa9.32□□□□□ -0.92
CSTF1-204ENST00000452950 ABTB2Q8N961 1025 aa9.32□□□□□ -0.92
CSTF1-204ENST00000452950 CRELD1Q96HD1 420 aa9.32□□□□□ -0.92
CSTF1-204ENST00000452950 C1QTNF2Q9BXJ5 285 aa9.32□□□□□ -0.92
CSTF1-204ENST00000452950 TBX22Q9Y458 520 aa9.32□□□□□ -0.92
CSTF1-204ENST00000452950 SBNO2Q9Y2G9 1366 aa9.32□□□□□ -0.92
CSTF1-204ENST00000452950 WASLO00401 505 aaPredicted RBP9.31□□□□□ -0.92
CSTF1-204ENST00000452950 TERTO14746 1132 aaKnown RBP9.31□□□□□ -0.92
CSTF1-204ENST00000452950 TNFRSF10BO14763 440 aa9.31□□□□□ -0.92
CSTF1-204ENST00000452950 TIMP2P16035 220 aa9.31□□□□□ -0.92
CSTF1-204ENST00000452950 GRM5P41594 1212 aa9.31□□□□□ -0.92
CSTF1-204ENST00000452950 GDF10P55107 478 aa9.31□□□□□ -0.92
CSTF1-204ENST00000452950 WDR4P57081 412 aaKnown RBP9.31□□□□□ -0.92
CSTF1-204ENST00000452950 ZNF654Q8IZM8 581 aa9.31□□□□□ -0.92
CSTF1-204ENST00000452950 KLF16Q9BXK1 252 aaPredicted RBP9.31□□□□□ -0.92
CSTF1-204ENST00000452950 PIF1Q9H611 641 aa9.31□□□□□ -0.92
CSTF1-204ENST00000452950 PPP1R12BO60237 982 aaPredicted RBP9.3□□□□□ -0.92
CSTF1-204ENST00000452950 SCTRP47872 440 aa9.3□□□□□ -0.92
CSTF1-204ENST00000452950 COX20Q5RI15 118 aa9.3□□□□□ -0.92
CSTF1-204ENST00000452950 EGFLAMQ63HQ2 1017 aa9.3□□□□□ -0.92
CSTF1-204ENST00000452950 TRMT44Q8IYL2 757 aaKnown RBP9.3□□□□□ -0.92
CSTF1-204ENST00000452950 ZFP42Q96MM3 310 aa9.3□□□□□ -0.92
CSTF1-204ENST00000452950 DDX41Q9UJV9 622 aaKnown RBP9.3□□□□□ -0.92
CSTF1-204ENST00000452950 TTBK1Q5TCY1 1321 aaPredicted RBP9.3□□□□□ -0.92
CSTF1-204ENST00000452950 BAZ1BQ9UIG0 1483 aaKnown RBP9.29□□□□□ -0.92
CSTF1-204ENST00000452950 A0A1W2PRU2 124 aa9.29□□□□□ -0.92
CSTF1-204ENST00000452950 SCNN1DP51172 638 aa9.29□□□□□ -0.92
CSTF1-204ENST00000452950 EPHA4P54764 986 aa9.29□□□□□ -0.92
CSTF1-204ENST00000452950 NR5A1Q13285 461 aa9.29□□□□□ -0.92
CSTF1-204ENST00000452950 VPS37DQ86XT2 251 aa9.29□□□□□ -0.92
CSTF1-204ENST00000452950 FBF1Q8TES7 1133 aa9.29□□□□□ -0.92
CSTF1-204ENST00000452950 NR3C2P08235 984 aa9.28□□□□□ -0.92
CSTF1-204ENST00000452950 ZNF394Q53GI3 561 aa9.28□□□□□ -0.92
CSTF1-204ENST00000452950 FRMD6Q96NE9 622 aa9.28□□□□□ -0.92
CSTF1-204ENST00000452950 OSBPL2Q9H1P3 480 aa9.28□□□□□ -0.92
CSTF1-204ENST00000452950 SERTAD1Q9UHV2 236 aa9.28□□□□□ -0.92
CSTF1-204ENST00000452950 AK5Q9Y6K8 562 aa9.28□□□□□ -0.92
CSTF1-204ENST00000452950 STK10O94804 968 aaKnown RBP9.27□□□□□ -0.93
CSTF1-204ENST00000452950 USP5P45974 858 aa9.27□□□□□ -0.93
CSTF1-204ENST00000452950 MRPL14Q6P1L8 145 aaKnown RBP9.27□□□□□ -0.93
CSTF1-204ENST00000452950 USP48Q86UV5 1035 aa9.27□□□□□ -0.93
CSTF1-204ENST00000452950 GJD3Q8N144 294 aa9.27□□□□□ -0.93
CSTF1-204ENST00000452950 STAG2Q8N3U4 1231 aa9.27□□□□□ -0.93
CSTF1-204ENST00000452950 KCTD15Q96SI1 283 aaPredicted RBP9.27□□□□□ -0.93
CSTF1-204ENST00000452950 POLIQ9UNA4 740 aa9.27□□□□□ -0.93
CSTF1-204ENST00000452950 PCDHGB7Q9Y5F8 929 aa9.27□□□□□ -0.93
CSTF1-204ENST00000452950 SMARCA4P51532 1647 aa9.27□□□□□ -0.93
CSTF1-204ENST00000452950 ZIC2O95409 532 aaPredicted RBP9.26□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms