RNA–Protein interactions for RNA: ENST00000450428.5

RAB11FIP3-205, Transcript of RAB11 family interacting protein 3, humanhuman

TSL 2 BASIC

Gene RAB11FIP3, Length 3,203 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB11FIP3-205ENST00000450428 NECAB1Q8N987 351 aa14.34□□□□□ -0.11
RAB11FIP3-205ENST00000450428 STX6O43752 255 aa14.34□□□□□ -0.11
RAB11FIP3-205ENST00000450428 CCDC192P0DO97 292 aa14.34□□□□□ -0.11
RAB11FIP3-205ENST00000450428 KRT222Q8N1A0 295 aa14.34□□□□□ -0.11
RAB11FIP3-205ENST00000450428 USHBP1Q8N6Y0 703 aa14.34□□□□□ -0.11
RAB11FIP3-205ENST00000450428 KIF20BQ96Q89 1820 aa14.33□□□□□ -0.12
RAB11FIP3-205ENST00000450428 UBE2HP62256 183 aa14.33□□□□□ -0.12
RAB11FIP3-205ENST00000450428 ANKRD44Q8N8A2 993 aa14.33□□□□□ -0.12
RAB11FIP3-205ENST00000450428 CHMP4CQ96CF2 233 aa14.33□□□□□ -0.12
RAB11FIP3-205ENST00000450428 EYA1Q99502 592 aa14.33□□□□□ -0.12
RAB11FIP3-205ENST00000450428 ADGRB2O60241 1585 aa14.33□□□□□ -0.12
RAB11FIP3-205ENST00000450428 ZSCAN22P10073 491 aaPredicted RBP14.33□□□□□ -0.12
RAB11FIP3-205ENST00000450428 TERF2Q15554 542 aa14.33□□□□□ -0.12
RAB11FIP3-205ENST00000450428 ANO6Q4KMQ2 910 aa14.33□□□□□ -0.12
RAB11FIP3-205ENST00000450428 TAF3Q5VWG9 929 aa14.33□□□□□ -0.12
RAB11FIP3-205ENST00000450428 MAP2P11137 1827 aaKnown RBP14.33□□□□□ -0.12
RAB11FIP3-205ENST00000450428 USP27XA6NNY8 438 aa14.32□□□□□ -0.12
RAB11FIP3-205ENST00000450428 MTHFSDQ2M296 383 aaKnown RBP14.32□□□□□ -0.12
RAB11FIP3-205ENST00000450428 CEP135Q66GS9 1140 aa14.32□□□□□ -0.12
RAB11FIP3-205ENST00000450428 TCEANC2Q96MN5 208 aa14.32□□□□□ -0.12
RAB11FIP3-205ENST00000450428 SPG7Q9UQ90 795 aa14.32□□□□□ -0.12
RAB11FIP3-205ENST00000450428 C3P01024 1663 aa14.32□□□□□ -0.12
RAB11FIP3-205ENST00000450428 SIPA1L2Q9P2F8 1722 aaPredicted RBP14.32□□□□□ -0.12
RAB11FIP3-205ENST00000450428 KIF18AQ8NI77 898 aa14.32□□□□□ -0.12
RAB11FIP3-205ENST00000450428 IL25Q9H293 177 aa14.32□□□□□ -0.12
RAB11FIP3-205ENST00000450428 TSPYL4Q9UJ04 414 aa14.32□□□□□ -0.12
RAB11FIP3-205ENST00000450428 KMT5BQ4FZB7 885 aa14.32□□□□□ -0.12
RAB11FIP3-205ENST00000450428 DDX41Q9UJV9 622 aaKnown RBP14.32□□□□□ -0.12
RAB11FIP3-205ENST00000450428 ARHGAP23Q9P227 1491 aa14.31□□□□□ -0.12
RAB11FIP3-205ENST00000450428 CLIP2Q9UDT6 1046 aa14.31□□□□□ -0.12
RAB11FIP3-205ENST00000450428 SLC4A2P04920 1241 aa14.31□□□□□ -0.12
RAB11FIP3-205ENST00000450428 LIG1P18858 919 aa14.31□□□□□ -0.12
RAB11FIP3-205ENST00000450428 DNAJC25Q9H1X3 360 aa14.31□□□□□ -0.12
RAB11FIP3-205ENST00000450428 SLIT1O75093 1534 aa14.31□□□□□ -0.12
RAB11FIP3-205ENST00000450428 FLT4P35916 1363 aa14.3□□□□□ -0.12
RAB11FIP3-205ENST00000450428 FER1L4A9Z1Z3 1794 aa14.3□□□□□ -0.12
RAB11FIP3-205ENST00000450428 SMTNL1A8MU46 457 aa14.3□□□□□ -0.12
RAB11FIP3-205ENST00000450428 PPFIA3O75145 1194 aa14.3□□□□□ -0.12
RAB11FIP3-205ENST00000450428 PROSER2Q86WR7 435 aaPredicted RBP14.3□□□□□ -0.12
RAB11FIP3-205ENST00000450428 NEK11Q8NG66 645 aa14.3□□□□□ -0.12
RAB11FIP3-205ENST00000450428 LARGE1O95461 756 aa14.3□□□□□ -0.12
RAB11FIP3-205ENST00000450428 MCM2P49736 904 aa14.3□□□□□ -0.12
RAB11FIP3-205ENST00000450428 AK2P54819 239 aa14.3□□□□□ -0.12
RAB11FIP3-205ENST00000450428 BICD2Q8TD16 824 aa14.3□□□□□ -0.12
RAB11FIP3-205ENST00000450428 TNMDQ9H2S6 317 aa14.3□□□□□ -0.12
RAB11FIP3-205ENST00000450428 OVOS2A0A0J9YW53 1432 aa14.3□□□□□ -0.12
RAB11FIP3-205ENST00000450428 OVOS2Q6IE36 1432 aa14.3□□□□□ -0.12
RAB11FIP3-205ENST00000450428 MSH6P52701 1360 aa14.3□□□□□ -0.12
RAB11FIP3-205ENST00000450428 ABCC4O15439 1325 aa14.3□□□□□ -0.12
RAB11FIP3-205ENST00000450428 F13A1P00488 732 aa14.3□□□□□ -0.12
RAB11FIP3-205ENST00000450428 ZNF853P0CG23 659 aa14.3□□□□□ -0.12
RAB11FIP3-205ENST00000450428 GJB2P29033 226 aa14.3□□□□□ -0.12
RAB11FIP3-205ENST00000450428 GABPB1Q06547 395 aaPredicted RBP14.3□□□□□ -0.12
RAB11FIP3-205ENST00000450428 STK3Q13188 491 aa14.3□□□□□ -0.12
RAB11FIP3-205ENST00000450428 FBXO38Q6PIJ6 1188 aa14.3□□□□□ -0.12
RAB11FIP3-205ENST00000450428 CACTINQ8WUQ7 758 aaKnown RBP14.3□□□□□ -0.12
RAB11FIP3-205ENST00000450428 ORAI2Q96SN7 254 aa14.3□□□□□ -0.12
RAB11FIP3-205ENST00000450428 NUP62CLQ9H1M0 184 aa14.3□□□□□ -0.12
RAB11FIP3-205ENST00000450428 PTCH1Q13635 1447 aa14.29□□□□□ -0.12
RAB11FIP3-205ENST00000450428 TYRO3Q06418 890 aa14.29□□□□□ -0.12
RAB11FIP3-205ENST00000450428 CWC27Q6UX04 472 aaKnown RBP14.29□□□□□ -0.12
RAB11FIP3-205ENST00000450428 ANKRD26Q9UPS8 1709 aa14.29□□□□□ -0.12
RAB11FIP3-205ENST00000450428 CTIFO43310 598 aaKnown RBP14.29□□□□□ -0.12
RAB11FIP3-205ENST00000450428 HMMRO75330 724 aa14.29□□□□□ -0.12
RAB11FIP3-205ENST00000450428 CASTP20810 708 aaKnown RBP14.29□□□□□ -0.12
RAB11FIP3-205ENST00000450428 HOXC9P31274 260 aa14.28□□□□□ -0.12
RAB11FIP3-205ENST00000450428 CUL4AQ13619 759 aa14.28□□□□□ -0.12
RAB11FIP3-205ENST00000450428 MAP3K11Q16584 847 aa14.28□□□□□ -0.12
RAB11FIP3-205ENST00000450428 ZSCAN25Q6NSZ9 544 aa14.28□□□□□ -0.12
RAB11FIP3-205ENST00000450428 ERCC4Q92889 916 aaPredicted RBP14.28□□□□□ -0.12
RAB11FIP3-205ENST00000450428 NOL10Q9BSC4 688 aaKnown RBP14.28□□□□□ -0.12
RAB11FIP3-205ENST00000450428 DACT1Q9NYF0 836 aa14.28□□□□□ -0.12
RAB11FIP3-205ENST00000450428 CHMLP26374 656 aa14.28□□□□□ -0.12
RAB11FIP3-205ENST00000450428 CBX8Q9HC52 389 aa14.28□□□□□ -0.12
RAB11FIP3-205ENST00000450428 SBNO1A3KN83 1393 aa14.28□□□□□ -0.12
RAB11FIP3-205ENST00000450428 PTPN14Q15678 1187 aa14.28□□□□□ -0.12
RAB11FIP3-205ENST00000450428 CCDC144BQ3MJ40 725 aa14.28□□□□□ -0.12
RAB11FIP3-205ENST00000450428 CCDC144CPQ8IYA2 1237 aa14.28□□□□□ -0.12
RAB11FIP3-205ENST00000450428 CAPN2P17655 700 aa14.27□□□□□ -0.12
RAB11FIP3-205ENST00000450428 HAP1P54257 671 aaPredicted RBP14.27□□□□□ -0.12
RAB11FIP3-205ENST00000450428 G2E3Q7L622 706 aa14.27□□□□□ -0.12
RAB11FIP3-205ENST00000450428 RPAP2Q8IXW5 612 aaPredicted RBP14.27□□□□□ -0.12
RAB11FIP3-205ENST00000450428 USP16Q9Y5T5 823 aa14.27□□□□□ -0.12
RAB11FIP3-205ENST00000450428 HNRNPH2P55795 449 aaKnown RBP14.27□□□□□ -0.13
RAB11FIP3-205ENST00000450428 FAM177A1Q8N128 213 aaPredicted RBP14.27□□□□□ -0.13
RAB11FIP3-205ENST00000450428 FAM200AQ8TCP9 573 aa14.27□□□□□ -0.13
RAB11FIP3-205ENST00000450428 SKIDA1Q1XH10 827 aa14.26□□□□□ -0.13
RAB11FIP3-205ENST00000450428 ERCC6LQ2NKX8 1250 aa14.26□□□□□ -0.13
RAB11FIP3-205ENST00000450428 GOLGA6L19H0YKK7 550 aa14.26□□□□□ -0.13
RAB11FIP3-205ENST00000450428 RASEFQ8IZ41 740 aa14.26□□□□□ -0.13
RAB11FIP3-205ENST00000450428 ARHGAP45Q92619 1136 aa14.26□□□□□ -0.13
RAB11FIP3-205ENST00000450428 KNDC1Q76NI1 1749 aa14.26□□□□□ -0.13
RAB11FIP3-205ENST00000450428 USP31Q70CQ4 1352 aa14.26□□□□□ -0.13
RAB11FIP3-205ENST00000450428 CHL1O00533 1208 aa14.26□□□□□ -0.13
RAB11FIP3-205ENST00000450428 ZNF397Q8NF99 534 aaPredicted RBP14.26□□□□□ -0.13
RAB11FIP3-205ENST00000450428 DIP2AQ14689 1571 aa14.25□□□□□ -0.13
RAB11FIP3-205ENST00000450428 TPM3P06753 285 aa14.25□□□□□ -0.13
RAB11FIP3-205ENST00000450428 ZNF165P49910 485 aa14.25□□□□□ -0.13
RAB11FIP3-205ENST00000450428 C10orf67Q8IYJ2 551 aa14.25□□□□□ -0.13
RAB11FIP3-205ENST00000450428 FMNL2Q96PY5 1086 aa14.25□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms