RNA–Protein interactions for RNA: ENST00000450271.5

PBRM1-217, Transcript of polybromo 1, humanhuman

TSL 5

Gene PBRM1, Length 517 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PBRM1-217ENST00000450271 ST5P78524 1137 aa34.7■■■■□ 3.15
PBRM1-217ENST00000450271 LMNB1P20700 586 aa34.69■■■■□ 3.14
PBRM1-217ENST00000450271 NFKBIEO00221 500 aa34.68■■■■□ 3.14
PBRM1-217ENST00000450271 NPHP1O15259 732 aa34.68■■■■□ 3.14
PBRM1-217ENST00000450271 ZC3H4Q9UPT8 1303 aaKnown RBP34.68■■■■□ 3.14
PBRM1-217ENST00000450271 KDM2BQ8NHM5 1336 aa34.67■■■■□ 3.14
PBRM1-217ENST00000450271 NBPF5PQ86XG9 351 aaPredicted RBP34.67■■■■□ 3.14
PBRM1-217ENST00000450271 SRGNP10124 158 aa34.66■■■■□ 3.14
PBRM1-217ENST00000450271 STYK1Q6J9G0 422 aa34.65■■■■□ 3.14
PBRM1-217ENST00000450271 MYBBP1AQ9BQG0 1328 aaKnown RBP34.64■■■■□ 3.14
PBRM1-217ENST00000450271 HLFQ16534 295 aa34.64■■■■□ 3.14
PBRM1-217ENST00000450271 NIP7Q9Y221 180 aaKnown RBP eCLIP34.64■■■■□ 3.14
PBRM1-217ENST00000450271 C21orf2O43822 256 aa34.63■■■■□ 3.13
PBRM1-217ENST00000450271 CNKSR1Q969H4 720 aa34.63■■■■□ 3.13
PBRM1-217ENST00000450271 RIPK4P57078 832 aa34.62■■■■□ 3.13
PBRM1-217ENST00000450271 MASTLQ96GX5 879 aa34.62■■■■□ 3.13
PBRM1-217ENST00000450271 RBM46Q8TBY0 533 aaKnown RBP34.6■■■■□ 3.13
PBRM1-217ENST00000450271 ZNF219Q9P2Y4 722 aaPredicted RBP34.6■■■■□ 3.13
PBRM1-217ENST00000450271 KLRG2A4D1S0 409 aaPredicted RBP34.59■■■■□ 3.13
PBRM1-217ENST00000450271 TMPOP42166 694 aaKnown RBP34.59■■■■□ 3.13
PBRM1-217ENST00000450271 PRPF40BQ6NWY9 871 aaKnown RBP34.59■■■■□ 3.13
PBRM1-217ENST00000450271 TPTE2Q6XPS3 522 aa34.59■■■■□ 3.13
PBRM1-217ENST00000450271 RRAGCQ9HB90 399 aa34.59■■■■□ 3.13
PBRM1-217ENST00000450271 SLX4Q8IY92 1834 aa34.58■■■■□ 3.13
PBRM1-217ENST00000450271 ERVV-1B6SEH8 477 aa34.58■■■■□ 3.13
PBRM1-217ENST00000450271 NGEFQ8N5V2 710 aa34.58■■■■□ 3.13
PBRM1-217ENST00000450271 TSPYL4Q9UJ04 414 aa34.58■■■■□ 3.13
PBRM1-217ENST00000450271 RRP7AQ9Y3A4 280 aaKnown RBP34.58■■■■□ 3.13
PBRM1-217ENST00000450271 FER1L6Q2WGJ9 1857 aa34.58■■■■□ 3.13
PBRM1-217ENST00000450271 TNRC6CQ9HCJ0 1690 aaKnown RBP34.57■■■■□ 3.13
PBRM1-217ENST00000450271 MAP3K15Q6ZN16 1313 aa34.56■■■■□ 3.12
PBRM1-217ENST00000450271 GLTPD2A6NH11 291 aa34.56■■■■□ 3.12
PBRM1-217ENST00000450271 C16orf71Q8IYS4 520 aaPredicted RBP34.56■■■■□ 3.12
PBRM1-217ENST00000450271 CCDC88AQ3V6T2 1871 aa34.56■■■■□ 3.12
PBRM1-217ENST00000450271 LTBP3Q9NS15 1303 aa34.55■■■■□ 3.12
PBRM1-217ENST00000450271 ARFGEF2Q9Y6D5 1785 aa34.55■■■■□ 3.12
PBRM1-217ENST00000450271 TTLL7Q6ZT98 887 aa34.55■■■■□ 3.12
PBRM1-217ENST00000450271 BABAM1Q9NWV8 329 aa34.55■■■■□ 3.12
PBRM1-217ENST00000450271 TIAM2Q8IVF5 1701 aa34.55■■■■□ 3.12
PBRM1-217ENST00000450271 MYL6BP14649 208 aa34.54■■■■□ 3.12
PBRM1-217ENST00000450271 LMOD3Q0VAK6 560 aa34.54■■■■□ 3.12
PBRM1-217ENST00000450271 ERBB4Q15303 1308 aa34.54■■■■□ 3.12
PBRM1-217ENST00000450271 FAM177BA6PVY3 158 aa34.53■■■■□ 3.12
PBRM1-217ENST00000450271 NPR1P16066 1061 aa34.53■■■■□ 3.12
PBRM1-217ENST00000450271 APLP1P51693 650 aa34.53■■■■□ 3.12
PBRM1-217ENST00000450271 KIF6Q6ZMV9 814 aa34.52■■■■□ 3.12
PBRM1-217ENST00000450271 C7orf43Q8WVR3 580 aa34.52■■■■□ 3.12
PBRM1-217ENST00000450271 TAOK3Q9H2K8 898 aa34.52■■■■□ 3.12
PBRM1-217ENST00000450271 SOGA3Q5TF21 947 aa34.51■■■■□ 3.12
PBRM1-217ENST00000450271 CCDC146Q8IYE0 955 aa34.51■■■■□ 3.12
PBRM1-217ENST00000450271 CACNA1SQ13698 1873 aa34.5■■■■□ 3.11
PBRM1-217ENST00000450271 NUP98P52948 1817 aa34.49■■■■□ 3.11
PBRM1-217ENST00000450271 FSTL1Q12841 308 aa34.49■■■■□ 3.11
PBRM1-217ENST00000450271 LRP10Q7Z4F1 713 aa34.49■■■■□ 3.11
PBRM1-217ENST00000450271 ERFEQ4G0M1 354 aa34.48■■■■□ 3.11
PBRM1-217ENST00000450271 ABCC12Q96J65 1359 aa34.48■■■■□ 3.11
PBRM1-217ENST00000450271 DICER1Q9UPY3 1922 aaKnown RBP34.47■■■■□ 3.11
PBRM1-217ENST00000450271 PDIA6Q15084 440 aa34.47■■■■□ 3.11
PBRM1-217ENST00000450271 RUNDC1Q96C34 613 aa34.47■■■■□ 3.11
PBRM1-217ENST00000450271 NYXQ9GZU5 481 aa34.47■■■■□ 3.11
PBRM1-217ENST00000450271 ZBTB3Q9H5J0 574 aa34.47■■■■□ 3.11
PBRM1-217ENST00000450271 GTF2E1P29083 439 aaPredicted RBP34.46■■■■□ 3.11
PBRM1-217ENST00000450271 WDR43Q15061 677 aaKnown RBP eCLIP34.46■■■■□ 3.11
PBRM1-217ENST00000450271 UBN2Q6ZU65 1347 aa34.46■■■■□ 3.11
PBRM1-217ENST00000450271 IBTKQ9P2D0 1353 aaPredicted RBP34.46■■■■□ 3.11
PBRM1-217ENST00000450271 VEGFAP15692 232 aaPredicted RBP34.45■■■■□ 3.11
PBRM1-217ENST00000450271 NEUROD2Q15784 382 aa34.45■■■■□ 3.11
PBRM1-217ENST00000450271 NUTM1Q86Y26 1132 aa34.45■■■■□ 3.11
PBRM1-217ENST00000450271 EIF2S2P20042 333 aaKnown RBP34.44■■■■□ 3.1
PBRM1-217ENST00000450271 CCDC93Q567U6 631 aa34.44■■■■□ 3.1
PBRM1-217ENST00000450271 PRKRIP1Q9H875 184 aaPredicted RBP34.44■■■■□ 3.1
PBRM1-217ENST00000450271 ADAMTS8Q9UP79 889 aa34.44■■■■□ 3.1
PBRM1-217ENST00000450271 TRIM35Q9UPQ4 493 aa34.44■■■■□ 3.1
PBRM1-217ENST00000450271 GPTP24298 496 aa34.43■■■■□ 3.1
PBRM1-217ENST00000450271 CRY2Q49AN0 593 aa34.43■■■■□ 3.1
PBRM1-217ENST00000450271 GIGYF2Q6Y7W6 1299 aaKnown RBP34.43■■■■□ 3.1
PBRM1-217ENST00000450271 ZNF34Q8IZ26 560 aa34.43■■■■□ 3.1
PBRM1-217ENST00000450271 PROSER3Q2NL68 480 aa34.42■■■■□ 3.1
PBRM1-217ENST00000450271 DPY19L2Q6NUT2 758 aa34.42■■■■□ 3.1
PBRM1-217ENST00000450271 POTECB2RU33 542 aa34.41■■■■□ 3.1
PBRM1-217ENST00000450271 CHL1O00533 1208 aa34.41■■■■□ 3.1
PBRM1-217ENST00000450271 SUSD4Q5VX71 490 aa34.41■■■■□ 3.1
PBRM1-217ENST00000450271 WDR90Q96KV7 1748 aa34.41■■■■□ 3.1
PBRM1-217ENST00000450271 RIC1Q4ADV7 1423 aa34.4■■■■□ 3.1
PBRM1-217ENST00000450271 ALDH1B1P30837 517 aa34.4■■■■□ 3.1
PBRM1-217ENST00000450271 DNAJC5GQ8N7S2 189 aa34.4■■■■□ 3.1
PBRM1-217ENST00000450271 SMC1BQ8NDV3 1235 aa34.4■■■■□ 3.1
PBRM1-217ENST00000450271 OLFM4Q6UX06 510 aa34.39■■■■□ 3.1
PBRM1-217ENST00000450271 ANXA1P04083 346 aa34.38■■■■□ 3.09
PBRM1-217ENST00000450271 NTSR2O95665 410 aa34.37■■■■□ 3.09
PBRM1-217ENST00000450271 FKBP4Q02790 459 aaKnown RBP eCLIP34.37■■■■□ 3.09
PBRM1-217ENST00000450271 KRT24Q2M2I5 525 aa34.35■■■■□ 3.09
PBRM1-217ENST00000450271 RTKN2Q8IZC4 609 aa34.35■■■■□ 3.09
PBRM1-217ENST00000450271 PARP10Q53GL7 1025 aa34.34■■■■□ 3.09
PBRM1-217ENST00000450271 SNED1Q8TER0 1413 aa34.34■■■■□ 3.09
PBRM1-217ENST00000450271 NECTIN2Q92692 538 aa34.34■■■■□ 3.09
PBRM1-217ENST00000450271 HOXA10P31260 410 aaPredicted RBP34.33■■■■□ 3.09
PBRM1-217ENST00000450271 ZNF277Q9NRM2 450 aaPredicted RBP34.33■■■■□ 3.09
PBRM1-217ENST00000450271 DDNO94850 711 aaPredicted RBP34.32■■■■□ 3.08
PBRM1-217ENST00000450271 HTRA3P83110 453 aa34.32■■■■□ 3.08
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms