RNA–Protein interactions for RNA: ENST00000450000.5

CPSF7-208, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 4

Gene CPSF7, Length 574 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-208ENST00000450000 ZNF219Q9P2Y4 722 aaPredicted RBP28.81■■■□□ 2.2
CPSF7-208ENST00000450000 ARFGEF1Q9Y6D6 1849 aa28.8■■■□□ 2.2
CPSF7-208ENST00000450000 RGL2O15211 777 aa28.8■■■□□ 2.2
CPSF7-208ENST00000450000 TMPOP42166 694 aaKnown RBP28.8■■■□□ 2.2
CPSF7-208ENST00000450000 CCDC146Q8IYE0 955 aa28.8■■■□□ 2.2
CPSF7-208ENST00000450000 CNKSR1Q969H4 720 aa28.8■■■□□ 2.2
CPSF7-208ENST00000450000 FAM177BA6PVY3 158 aa28.79■■■□□ 2.2
CPSF7-208ENST00000450000 KIF3CO14782 793 aa28.79■■■□□ 2.2
CPSF7-208ENST00000450000 MYL6BP14649 208 aa28.79■■■□□ 2.2
CPSF7-208ENST00000450000 LMNB1P20700 586 aa28.79■■■□□ 2.2
CPSF7-208ENST00000450000 RASSF7Q02833 373 aa28.79■■■□□ 2.2
CPSF7-208ENST00000450000 RUNDC1Q96C34 613 aa28.77■■■□□ 2.2
CPSF7-208ENST00000450000 MASTLQ96GX5 879 aa28.77■■■□□ 2.2
CPSF7-208ENST00000450000 C21orf2O43822 256 aa28.76■■■□□ 2.19
CPSF7-208ENST00000450000 STYK1Q6J9G0 422 aa28.76■■■□□ 2.19
CPSF7-208ENST00000450000 NMRK2Q9NPI5 230 aa28.76■■■□□ 2.19
CPSF7-208ENST00000450000 BABAM1Q9NWV8 329 aa28.76■■■□□ 2.19
CPSF7-208ENST00000450000 TOMM70O94826 608 aa28.75■■■□□ 2.19
CPSF7-208ENST00000450000 EIF2S2P20042 333 aaKnown RBP28.74■■■□□ 2.19
CPSF7-208ENST00000450000 HLFQ16534 295 aa28.74■■■□□ 2.19
CPSF7-208ENST00000450000 LAS1LQ9Y4W2 734 aaKnown RBP28.74■■■□□ 2.19
CPSF7-208ENST00000450000 DLG5Q8TDM6 1919 aa28.74■■■□□ 2.19
CPSF7-208ENST00000450000 ERVV-1B6SEH8 477 aa28.73■■■□□ 2.19
CPSF7-208ENST00000450000 SRGNP10124 158 aa28.73■■■□□ 2.19
CPSF7-208ENST00000450000 HSPA6P17066 643 aa28.73■■■□□ 2.19
CPSF7-208ENST00000450000 SOGA3Q5TF21 947 aa28.73■■■□□ 2.19
CPSF7-208ENST00000450000 NYXQ9GZU5 481 aa28.73■■■□□ 2.19
CPSF7-208ENST00000450000 ERBB4Q15303 1308 aa28.72■■■□□ 2.19
CPSF7-208ENST00000450000 MAP3K15Q6ZN16 1313 aa28.72■■■□□ 2.19
CPSF7-208ENST00000450000 ZC3H4Q9UPT8 1303 aaKnown RBP28.72■■■□□ 2.19
CPSF7-208ENST00000450000 PRKRIP1Q9H875 184 aaPredicted RBP28.72■■■□□ 2.19
CPSF7-208ENST00000450000 ZEB1P37275 1124 aaPredicted RBP28.71■■■□□ 2.19
CPSF7-208ENST00000450000 BCORQ6W2J9 1755 aa28.7■■■□□ 2.19
CPSF7-208ENST00000450000 NPR1P16066 1061 aa28.7■■■□□ 2.18
CPSF7-208ENST00000450000 PRPF40BQ6NWY9 871 aaKnown RBP28.7■■■□□ 2.18
CPSF7-208ENST00000450000 ZBTB3Q9H5J0 574 aa28.7■■■□□ 2.18
CPSF7-208ENST00000450000 ADAMTS8Q9UP79 889 aa28.7■■■□□ 2.18
CPSF7-208ENST00000450000 TTLL7Q6ZT98 887 aa28.69■■■□□ 2.18
CPSF7-208ENST00000450000 RRAGCQ9HB90 399 aa28.69■■■□□ 2.18
CPSF7-208ENST00000450000 KDM3BQ7LBC6 1761 aa28.68■■■□□ 2.18
CPSF7-208ENST00000450000 NFKBIEO00221 500 aa28.68■■■□□ 2.18
CPSF7-208ENST00000450000 TAOK3Q9H2K8 898 aa28.68■■■□□ 2.18
CPSF7-208ENST00000450000 DPY19L2Q6NUT2 758 aa28.67■■■□□ 2.18
CPSF7-208ENST00000450000 LAMB4A4D0S4 1761 aa28.67■■■□□ 2.18
CPSF7-208ENST00000450000 DLEC1Q9Y238 1755 aa28.67■■■□□ 2.18
CPSF7-208ENST00000450000 GPTP24298 496 aa28.66■■■□□ 2.18
CPSF7-208ENST00000450000 ALDH1B1P30837 517 aa28.65■■■□□ 2.18
CPSF7-208ENST00000450000 ERFEQ4G0M1 354 aa28.65■■■□□ 2.18
CPSF7-208ENST00000450000 RBM46Q8TBY0 533 aaKnown RBP28.64■■■□□ 2.18
CPSF7-208ENST00000450000 NECTIN2Q92692 538 aa28.64■■■□□ 2.18
CPSF7-208ENST00000450000 ANKRD31Q8N7Z5 1873 aa28.63■■■□□ 2.17
CPSF7-208ENST00000450000 GLTPD2A6NH11 291 aa28.63■■■□□ 2.17
CPSF7-208ENST00000450000 CCDC93Q567U6 631 aa28.63■■■□□ 2.17
CPSF7-208ENST00000450000 PPP1R42Q7Z4L9 355 aa28.62■■■□□ 2.17
CPSF7-208ENST00000450000 NUTM1Q86Y26 1132 aa28.62■■■□□ 2.17
CPSF7-208ENST00000450000 GIGYF2Q6Y7W6 1299 aaKnown RBP28.61■■■□□ 2.17
CPSF7-208ENST00000450000 RPGRQ92834 1020 aaKnown RBP28.61■■■□□ 2.17
CPSF7-208ENST00000450000 KLRG2A4D1S0 409 aaPredicted RBP28.6■■■□□ 2.17
CPSF7-208ENST00000450000 CHL1O00533 1208 aa28.6■■■□□ 2.17
CPSF7-208ENST00000450000 VEGFAP15692 232 aaPredicted RBP28.6■■■□□ 2.17
CPSF7-208ENST00000450000 APLP1P51693 650 aa28.6■■■□□ 2.17
CPSF7-208ENST00000450000 PRELPP51888 382 aa28.6■■■□□ 2.17
CPSF7-208ENST00000450000 AIMP1Q12904 312 aaKnown RBP28.6■■■□□ 2.17
CPSF7-208ENST00000450000 TRIM35Q9UPQ4 493 aa28.6■■■□□ 2.17
CPSF7-208ENST00000450000 LTBP3Q9NS15 1303 aa28.6■■■□□ 2.17
CPSF7-208ENST00000450000 PARP10Q53GL7 1025 aa28.59■■■□□ 2.17
CPSF7-208ENST00000450000 COL11A2P13942 1736 aaPredicted RBP28.58■■■□□ 2.17
CPSF7-208ENST00000450000 ANXA1P04083 346 aa28.58■■■□□ 2.17
CPSF7-208ENST00000450000 FSTL1Q12841 308 aa28.58■■■□□ 2.17
CPSF7-208ENST00000450000 HSP90AB3PQ58FF7 597 aa28.58■■■□□ 2.17
CPSF7-208ENST00000450000 CALD1Q05682 793 aaKnown RBP28.57■■■□□ 2.16
CPSF7-208ENST00000450000 SUSD4Q5VX71 490 aa28.57■■■□□ 2.16
CPSF7-208ENST00000450000 ZNF34Q8IZ26 560 aa28.57■■■□□ 2.16
CPSF7-208ENST00000450000 RTKN2Q8IZC4 609 aa28.57■■■□□ 2.16
CPSF7-208ENST00000450000 SBF1O95248 1867 aa28.56■■■□□ 2.16
CPSF7-208ENST00000450000 PDIA6Q15084 440 aa28.56■■■□□ 2.16
CPSF7-208ENST00000450000 COPS6Q7L5N1 327 aa28.56■■■□□ 2.16
CPSF7-208ENST00000450000 PROSER3Q2NL68 480 aa28.55■■■□□ 2.16
CPSF7-208ENST00000450000 HDGFL1Q5TGJ6 251 aa28.55■■■□□ 2.16
CPSF7-208ENST00000450000 SMC1BQ8NDV3 1235 aa28.55■■■□□ 2.16
CPSF7-208ENST00000450000 CFAP44Q96MT7 982 aa28.55■■■□□ 2.16
CPSF7-208ENST00000450000 UTP14AQ9BVJ6 771 aaKnown RBP28.55■■■□□ 2.16
CPSF7-208ENST00000450000 TMX4Q9H1E5 349 aaPredicted RBP28.55■■■□□ 2.16
CPSF7-208ENST00000450000 IBTKQ9P2D0 1353 aaPredicted RBP28.54■■■□□ 2.16
CPSF7-208ENST00000450000 UBN2Q6ZU65 1347 aa28.54■■■□□ 2.16
CPSF7-208ENST00000450000 APAF1O14727 1248 aa28.54■■■□□ 2.16
CPSF7-208ENST00000450000 XAGE3Q8WTP9 111 aa28.54■■■□□ 2.16
CPSF7-208ENST00000450000 RBM17Q96I25 401 aaKnown RBP28.54■■■□□ 2.16
CPSF7-208ENST00000450000 DDX21Q9NR30 783 aaKnown RBP eCLIP28.54■■■□□ 2.16
CPSF7-208ENST00000450000 FKBP4Q02790 459 aaKnown RBP eCLIP28.53■■■□□ 2.16
CPSF7-208ENST00000450000 KRT24Q2M2I5 525 aa28.53■■■□□ 2.16
CPSF7-208ENST00000450000 C7orf43Q8WVR3 580 aa28.53■■■□□ 2.16
CPSF7-208ENST00000450000 NLRP3Q96P20 1036 aa28.53■■■□□ 2.16
CPSF7-208ENST00000450000 ABCC12Q96J65 1359 aa28.52■■■□□ 2.16
CPSF7-208ENST00000450000 HOXB7P09629 217 aa28.52■■■□□ 2.16
CPSF7-208ENST00000450000 SLX4Q8IY92 1834 aa28.51■■■□□ 2.15
CPSF7-208ENST00000450000 CRY2Q49AN0 593 aa28.51■■■□□ 2.15
CPSF7-208ENST00000450000 CHPF2Q9P2E5 772 aa28.51■■■□□ 2.15
CPSF7-208ENST00000450000 NTSR2O95665 410 aa28.5■■■□□ 2.15
CPSF7-208ENST00000450000 CC2D2BQ6DHV5 1058 aa28.5■■■□□ 2.15
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms