RNA–Protein interactions for RNA: ENST00000449771.6

RAPGEF3-205, Transcript of Rap guanine nucleotide exchange factor 3, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene RAPGEF3, Length 6,061 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF3-205ENST00000449771 CHRNA2Q15822 529 aa16.22■□□□□ 0.19
RAPGEF3-205ENST00000449771 PTPRCP08575 1304 aa16.22■□□□□ 0.19
RAPGEF3-205ENST00000449771 SPTY2D1Q68D10 685 aaPredicted RBP16.22■□□□□ 0.19
RAPGEF3-205ENST00000449771 PDCL2Q8N4E4 241 aa16.22■□□□□ 0.19
RAPGEF3-205ENST00000449771 KAT14Q9H8E8 782 aa16.22■□□□□ 0.19
RAPGEF3-205ENST00000449771 GOLGA6L7A0A1B0GV03 622 aa16.21■□□□□ 0.19
RAPGEF3-205ENST00000449771 CCT2P78371 535 aaKnown RBP16.21■□□□□ 0.19
RAPGEF3-205ENST00000449771 PDE4BQ07343 736 aa16.21■□□□□ 0.19
RAPGEF3-205ENST00000449771 IDI1Q13907 227 aa16.21■□□□□ 0.19
RAPGEF3-205ENST00000449771 TRMT1LQ7Z2T5 733 aaKnown RBP16.21■□□□□ 0.19
RAPGEF3-205ENST00000449771 EVI5LQ96CN4 794 aa16.21■□□□□ 0.19
RAPGEF3-205ENST00000449771 VPS36Q86VN1 386 aa16.21■□□□□ 0.19
RAPGEF3-205ENST00000449771 CCDC144CPQ8IYA2 1237 aa16.21■□□□□ 0.19
RAPGEF3-205ENST00000449771 NBPF6Q5VWK0 638 aa16.21■□□□□ 0.18
RAPGEF3-205ENST00000449771 NBPF5PQ86XG9 351 aaPredicted RBP16.21■□□□□ 0.18
RAPGEF3-205ENST00000449771 CCDC12Q8WUD4 166 aaPredicted RBP16.21■□□□□ 0.18
RAPGEF3-205ENST00000449771 NBPF4Q96M43 638 aa16.21■□□□□ 0.18
RAPGEF3-205ENST00000449771 SYCE3A1L190 88 aa16.2■□□□□ 0.18
RAPGEF3-205ENST00000449771 TSPY2A6NKD2 308 aa16.2■□□□□ 0.18
RAPGEF3-205ENST00000449771 ANO10Q9NW15 660 aa16.2■□□□□ 0.18
RAPGEF3-205ENST00000449771 KIF20AO95235 890 aa16.2■□□□□ 0.18
RAPGEF3-205ENST00000449771 NKTRP30414 1462 aaKnown RBP16.2■□□□□ 0.18
RAPGEF3-205ENST00000449771 PLB1Q6P1J6 1458 aa16.2■□□□□ 0.18
RAPGEF3-205ENST00000449771 NOS1P29475 1434 aa16.2■□□□□ 0.18
RAPGEF3-205ENST00000449771 USP8P40818 1118 aa16.2■□□□□ 0.18
RAPGEF3-205ENST00000449771 SNRKQ9NRH2 765 aa16.2■□□□□ 0.18
RAPGEF3-205ENST00000449771 WDR97A6NE52 1622 aa16.2■□□□□ 0.18
RAPGEF3-205ENST00000449771 KIF5BP33176 963 aa16.2■□□□□ 0.18
RAPGEF3-205ENST00000449771 TMEM67Q5HYA8 995 aa16.2■□□□□ 0.18
RAPGEF3-205ENST00000449771 PTPN23Q9H3S7 1636 aa16.19■□□□□ 0.18
RAPGEF3-205ENST00000449771 CALML4Q96GE6 196 aa16.19■□□□□ 0.18
RAPGEF3-205ENST00000449771 SCAND2PQ9GZW5 306 aaPredicted RBP16.19■□□□□ 0.18
RAPGEF3-205ENST00000449771 DENND4BO75064 1496 aaPredicted RBP16.19■□□□□ 0.18
RAPGEF3-205ENST00000449771 GSTO1P78417 241 aa16.19■□□□□ 0.18
RAPGEF3-205ENST00000449771 CCDC152Q4G0S7 254 aa16.19■□□□□ 0.18
RAPGEF3-205ENST00000449771 FERMT2Q96AC1 680 aa16.19■□□□□ 0.18
RAPGEF3-205ENST00000449771 SNRPA1P09661 255 aaKnown RBP16.18■□□□□ 0.18
RAPGEF3-205ENST00000449771 CADPS2Q86UW7 1296 aa16.18■□□□□ 0.18
RAPGEF3-205ENST00000449771 MSH6P52701 1360 aa16.18■□□□□ 0.18
RAPGEF3-205ENST00000449771 CNNM3Q8NE01 707 aa16.18■□□□□ 0.18
RAPGEF3-205ENST00000449771 CCDC102AQ96A19 550 aa16.18■□□□□ 0.18
RAPGEF3-205ENST00000449771 SAMM50Q9Y512 469 aa16.18■□□□□ 0.18
RAPGEF3-205ENST00000449771 CCDC178Q5BJE1 867 aa16.18■□□□□ 0.18
RAPGEF3-205ENST00000449771 UBE3BQ7Z3V4 1068 aa16.18■□□□□ 0.18
RAPGEF3-205ENST00000449771 ACSBG1Q96GR2 724 aa16.18■□□□□ 0.18
RAPGEF3-205ENST00000449771 MFSD6Q6ZSS7 791 aa16.18■□□□□ 0.18
RAPGEF3-205ENST00000449771 GPATCH11Q8N954 259 aa16.18■□□□□ 0.18
RAPGEF3-205ENST00000449771 JARID2Q92833 1246 aaPredicted RBP16.18■□□□□ 0.18
RAPGEF3-205ENST00000449771 DRC1Q96MC2 740 aa16.18■□□□□ 0.18
RAPGEF3-205ENST00000449771 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP16.18■□□□□ 0.18
RAPGEF3-205ENST00000449771 ACEP12821 1306 aa16.18■□□□□ 0.18
RAPGEF3-205ENST00000449771 PCF11O94913 1555 aaKnown RBP16.18■□□□□ 0.18
RAPGEF3-205ENST00000449771 MCM4P33991 863 aa16.18■□□□□ 0.18
RAPGEF3-205ENST00000449771 MPHOSPH6Q99547 160 aaKnown RBP16.17■□□□□ 0.18
RAPGEF3-205ENST00000449771 CTNNBL1Q8WYA6 563 aaPredicted RBP16.17■□□□□ 0.18
RAPGEF3-205ENST00000449771 CALCOCO1Q9P1Z2 691 aa16.17■□□□□ 0.18
RAPGEF3-205ENST00000449771 PLEKHH1Q9ULM0 1364 aa16.17■□□□□ 0.18
RAPGEF3-205ENST00000449771 ZSCAN30Q86W11 494 aa16.17■□□□□ 0.18
RAPGEF3-205ENST00000449771 PIK3R4Q99570 1358 aa16.17■□□□□ 0.18
RAPGEF3-205ENST00000449771 ABCC5O15440 1437 aa16.17■□□□□ 0.18
RAPGEF3-205ENST00000449771 CRNKL1Q9BZJ0 848 aaKnown RBP16.16■□□□□ 0.18
RAPGEF3-205ENST00000449771 ECHDC1Q9NTX5 307 aa16.16■□□□□ 0.18
RAPGEF3-205ENST00000449771 LIMCH1Q9UPQ0 1083 aa16.16■□□□□ 0.18
RAPGEF3-205ENST00000449771 ATP6V1AP38606 617 aa16.16■□□□□ 0.18
RAPGEF3-205ENST00000449771 HAND2P61296 217 aa16.16■□□□□ 0.18
RAPGEF3-205ENST00000449771 NCOA1Q15788 1441 aa16.16■□□□□ 0.18
RAPGEF3-205ENST00000449771 NUP88Q99567 741 aaPredicted RBP16.16■□□□□ 0.18
RAPGEF3-205ENST00000449771 GIMAP7Q8NHV1 300 aa16.16■□□□□ 0.18
RAPGEF3-205ENST00000449771 LARP6Q9BRS8 491 aaKnown RBP16.16■□□□□ 0.18
RAPGEF3-205ENST00000449771 TOP1P11387 765 aaKnown RBP16.16■□□□□ 0.18
RAPGEF3-205ENST00000449771 SFPQP23246 707 aaKnown RBP eCLIP16.16■□□□□ 0.18
RAPGEF3-205ENST00000449771 CCDC183Q5T5S1 534 aa16.16■□□□□ 0.18
RAPGEF3-205ENST00000449771 DHX37Q8IY37 1157 aaKnown RBP16.16■□□□□ 0.18
RAPGEF3-205ENST00000449771 TCP11L1Q9NUJ3 509 aa16.16■□□□□ 0.18
RAPGEF3-205ENST00000449771 IRX3P78415 501 aaPredicted RBP16.16■□□□□ 0.18
RAPGEF3-205ENST00000449771 CCDC91Q7Z6B0 441 aa16.16■□□□□ 0.18
RAPGEF3-205ENST00000449771 AMPD3Q01432 767 aa16.15■□□□□ 0.18
RAPGEF3-205ENST00000449771 CASQ1P31415 396 aa16.15■□□□□ 0.18
RAPGEF3-205ENST00000449771 IARSP41252 1262 aaKnown RBP16.15■□□□□ 0.18
RAPGEF3-205ENST00000449771 TDRD12Q587J7 1177 aaKnown RBP16.15■□□□□ 0.18
RAPGEF3-205ENST00000449771 ZSCAN12O43309 604 aa16.15■□□□□ 0.18
RAPGEF3-205ENST00000449771 USP16Q9Y5T5 823 aa16.15■□□□□ 0.18
RAPGEF3-205ENST00000449771 DNA2P51530 1060 aa16.15■□□□□ 0.18
RAPGEF3-205ENST00000449771 CETN1Q12798 172 aa16.15■□□□□ 0.18
RAPGEF3-205ENST00000449771 KIF5CO60282 957 aa16.15■□□□□ 0.18
RAPGEF3-205ENST00000449771 UQCRFS1P1P0C7P4 283 aa16.15■□□□□ 0.18
RAPGEF3-205ENST00000449771 SETDB2Q96T68 719 aa16.15■□□□□ 0.18
RAPGEF3-205ENST00000449771 CCDC113Q9H0I3 377 aa16.15■□□□□ 0.18
RAPGEF3-205ENST00000449771 MACROD2A1Z1Q3 448 aa16.14■□□□□ 0.17
RAPGEF3-205ENST00000449771 PI4KAP2A4QPH2 592 aa16.14■□□□□ 0.17
RAPGEF3-205ENST00000449771 SYCP3Q8IZU3 236 aa16.14■□□□□ 0.17
RAPGEF3-205ENST00000449771 PI4KAP1Q8N8J0 262 aa16.14■□□□□ 0.17
RAPGEF3-205ENST00000449771 FAM83GA6ND36 823 aa16.14■□□□□ 0.17
RAPGEF3-205ENST00000449771 METAP2P50579 478 aaKnown RBP eCLIP16.14■□□□□ 0.17
RAPGEF3-205ENST00000449771 ZCRB1Q8TBF4 217 aaKnown RBP16.14■□□□□ 0.17
RAPGEF3-205ENST00000449771 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP16.14■□□□□ 0.17
RAPGEF3-205ENST00000449771 UBAP1LF5GYI3 381 aa16.14■□□□□ 0.17
RAPGEF3-205ENST00000449771 TNNT1P13805 278 aa16.14■□□□□ 0.17
RAPGEF3-205ENST00000449771 MTIF2P46199 727 aaKnown RBP16.14■□□□□ 0.17
RAPGEF3-205ENST00000449771 GOPCQ9HD26 462 aa16.14■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms