RNA–Protein interactions for RNA: ENST00000448940.5

CDC42BPA-209, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 1 (best)

Gene CDC42BPA, Length 7,355 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-209ENST00000448940 CSPG5O95196 566 aa6.81□□□□□ -1.32
CDC42BPA-209ENST00000448940 MPNDQ8N594 471 aa6.81□□□□□ -1.32
CDC42BPA-209ENST00000448940 SH3TC1Q8TE82 1336 aa6.81□□□□□ -1.32
CDC42BPA-209ENST00000448940 AK9Q5TCS8 1911 aa6.81□□□□□ -1.32
CDC42BPA-209ENST00000448940 ATP5J2-PTCD1G3V325 749 aa6.81□□□□□ -1.32
CDC42BPA-209ENST00000448940 SURF6O75683 361 aaKnown RBP6.81□□□□□ -1.32
CDC42BPA-209ENST00000448940 ZNF157P51786 506 aaPredicted RBP6.81□□□□□ -1.32
CDC42BPA-209ENST00000448940 CCDC93Q567U6 631 aa6.81□□□□□ -1.32
CDC42BPA-209ENST00000448940 ERC1Q8IUD2 1116 aa6.81□□□□□ -1.32
CDC42BPA-209ENST00000448940 STK11IPQ8N1F8 1099 aa6.81□□□□□ -1.32
CDC42BPA-209ENST00000448940 POLKQ9UBT6 870 aa6.81□□□□□ -1.32
CDC42BPA-209ENST00000448940 AKAP2Q9Y2D5 859 aa6.81□□□□□ -1.32
CDC42BPA-209ENST00000448940 ZBED2Q9BTP6 218 aa6.81□□□□□ -1.32
CDC42BPA-209ENST00000448940 TAOK3Q9H2K8 898 aa6.81□□□□□ -1.32
CDC42BPA-209ENST00000448940 ERC2O15083 957 aa6.81□□□□□ -1.32
CDC42BPA-209ENST00000448940 NACAP1Q9BZK3 213 aa6.81□□□□□ -1.32
CDC42BPA-209ENST00000448940 DIAPH3Q9NSV4 1193 aa6.81□□□□□ -1.32
CDC42BPA-209ENST00000448940 SERPINB2P05120 415 aa6.81□□□□□ -1.32
CDC42BPA-209ENST00000448940 CCT4P50991 539 aaKnown RBP6.81□□□□□ -1.32
CDC42BPA-209ENST00000448940 SPTY2D1Q68D10 685 aaPredicted RBP6.81□□□□□ -1.32
CDC42BPA-209ENST00000448940 CPLX2Q6PUV4 134 aaKnown RBP6.81□□□□□ -1.32
CDC42BPA-209ENST00000448940 BARGINQ6ZT62 677 aa6.81□□□□□ -1.32
CDC42BPA-209ENST00000448940 NOC3LQ8WTT2 800 aaKnown RBP6.81□□□□□ -1.32
CDC42BPA-209ENST00000448940 ANKRD2Q9GZV1 360 aa6.81□□□□□ -1.32
CDC42BPA-209ENST00000448940 PDE4CQ08493 712 aa6.8□□□□□ -1.32
CDC42BPA-209ENST00000448940 PTCH1Q13635 1447 aa6.8□□□□□ -1.32
CDC42BPA-209ENST00000448940 USPL1Q5W0Q7 1092 aa6.8□□□□□ -1.32
CDC42BPA-209ENST00000448940 COPS6Q7L5N1 327 aa6.8□□□□□ -1.32
CDC42BPA-209ENST00000448940 ZNF287Q9HBT7 754 aa6.8□□□□□ -1.32
CDC42BPA-209ENST00000448940 PALLDQ8WX93 1383 aa6.8□□□□□ -1.32
CDC42BPA-209ENST00000448940 HLA-DOAP06340 250 aa6.8□□□□□ -1.32
CDC42BPA-209ENST00000448940 NCLP19338 710 aaKnown RBP6.8□□□□□ -1.32
CDC42BPA-209ENST00000448940 KCNQ4P56696 695 aa6.8□□□□□ -1.32
CDC42BPA-209ENST00000448940 UBXN2AP68543 259 aa6.8□□□□□ -1.32
CDC42BPA-209ENST00000448940 GADL1Q6ZQY3 521 aa6.8□□□□□ -1.32
CDC42BPA-209ENST00000448940 CCDC24Q8N4L8 307 aa6.8□□□□□ -1.32
CDC42BPA-209ENST00000448940 XAGE3Q8WTP9 111 aa6.8□□□□□ -1.32
CDC42BPA-209ENST00000448940 THUMPD2Q9BTF0 503 aaKnown RBP6.8□□□□□ -1.32
CDC42BPA-209ENST00000448940 TMPOP42166 694 aaKnown RBP6.8□□□□□ -1.32
CDC42BPA-209ENST00000448940 AEBP1Q8IUX7 1158 aa6.8□□□□□ -1.32
CDC42BPA-209ENST00000448940 KCNG4Q8TDN1 519 aa6.8□□□□□ -1.32
CDC42BPA-209ENST00000448940 SIL1Q9H173 461 aa6.8□□□□□ -1.32
CDC42BPA-209ENST00000448940 SPATA31A1Q5TZJ5 1347 aa6.8□□□□□ -1.32
CDC42BPA-209ENST00000448940 SPATA31A5Q5VU36 1347 aa6.8□□□□□ -1.32
CDC42BPA-209ENST00000448940 SPATA31A7Q8IWB4 1347 aa6.8□□□□□ -1.32
CDC42BPA-209ENST00000448940 VEGFAP15692 232 aaPredicted RBP6.8□□□□□ -1.32
CDC42BPA-209ENST00000448940 APLP1P51693 650 aa6.8□□□□□ -1.32
CDC42BPA-209ENST00000448940 IRX3P78415 501 aaPredicted RBP6.8□□□□□ -1.32
CDC42BPA-209ENST00000448940 GGA1Q9UJY5 639 aa6.8□□□□□ -1.32
CDC42BPA-209ENST00000448940 PNPLA6Q8IY17 1366 aa6.8□□□□□ -1.32
CDC42BPA-209ENST00000448940 UFL1O94874 794 aa6.79□□□□□ -1.32
CDC42BPA-209ENST00000448940 ZSCAN25Q6NSZ9 544 aa6.79□□□□□ -1.32
CDC42BPA-209ENST00000448940 ZNF790Q6PG37 636 aa6.79□□□□□ -1.32
CDC42BPA-209ENST00000448940 SLKQ9H2G2 1235 aaPredicted RBP6.79□□□□□ -1.32
CDC42BPA-209ENST00000448940 ADAMTS8Q9UP79 889 aa6.79□□□□□ -1.32
CDC42BPA-209ENST00000448940 UTP3Q9NQZ2 479 aaKnown RBP eCLIP6.79□□□□□ -1.322e-6■■■■■ 64.6
CDC42BPA-209ENST00000448940 A0A1W2PP64 1363 aa6.79□□□□□ -1.32
CDC42BPA-209ENST00000448940 B4DLN1 442 aa6.79□□□□□ -1.32
CDC42BPA-209ENST00000448940 BAG3O95817 575 aa6.79□□□□□ -1.32
CDC42BPA-209ENST00000448940 MRPL12P52815 198 aaKnown RBP6.79□□□□□ -1.32
CDC42BPA-209ENST00000448940 RUFY2Q8WXA3 655 aa6.79□□□□□ -1.32
CDC42BPA-209ENST00000448940 CHMP4CQ96CF2 233 aa6.79□□□□□ -1.32
CDC42BPA-209ENST00000448940 SLC52A2Q9HAB3 445 aa6.79□□□□□ -1.32
CDC42BPA-209ENST00000448940 TFRCP02786 760 aaKnown RBP6.79□□□□□ -1.32
CDC42BPA-209ENST00000448940 RGS3P49796 1198 aa6.79□□□□□ -1.32
CDC42BPA-209ENST00000448940 EXOSC9Q06265 439 aaKnown RBP6.79□□□□□ -1.32
CDC42BPA-209ENST00000448940 PHKG2P15735 406 aa6.79□□□□□ -1.32
CDC42BPA-209ENST00000448940 MAP2K1Q02750 393 aaPredicted RBP6.79□□□□□ -1.32
CDC42BPA-209ENST00000448940 FAM47CQ5HY64 1035 aa6.79□□□□□ -1.32
CDC42BPA-209ENST00000448940 CCDC174Q6PII3 467 aa6.79□□□□□ -1.32
CDC42BPA-209ENST00000448940 UBE3BQ7Z3V4 1068 aa6.79□□□□□ -1.32
CDC42BPA-209ENST00000448940 RTKN2Q8IZC4 609 aa6.79□□□□□ -1.32
CDC42BPA-209ENST00000448940 RCAN3Q9UKA8 241 aa6.79□□□□□ -1.32
CDC42BPA-209ENST00000448940 ZMYM4Q5VZL5 1548 aa6.79□□□□□ -1.32
CDC42BPA-209ENST00000448940 ZGPATQ8N5A5 531 aaKnown RBP6.79□□□□□ -1.32
CDC42BPA-209ENST00000448940 DNAAF4Q8WXU2 420 aa6.79□□□□□ -1.32
CDC42BPA-209ENST00000448940 DCCP43146 1447 aa6.78□□□□□ -1.32
CDC42BPA-209ENST00000448940 MATR3P43243 847 aaKnown RBP eCLIP6.78□□□□□ -1.321e-6■■□□□ 13.1
CDC42BPA-209ENST00000448940 TNFAIP1Q13829 316 aa6.78□□□□□ -1.32
CDC42BPA-209ENST00000448940 DDX19BQ9UMR2 479 aa6.78□□□□□ -1.32
CDC42BPA-209ENST00000448940 PRDM15P57071 1507 aaPredicted RBP6.78□□□□□ -1.32
CDC42BPA-209ENST00000448940 PRAG1Q86YV5 1406 aa6.78□□□□□ -1.32
CDC42BPA-209ENST00000448940 MFAP1P55081 439 aaKnown RBP6.78□□□□□ -1.32
CDC42BPA-209ENST00000448940 NFXL1Q6ZNB6 911 aa6.78□□□□□ -1.32
CDC42BPA-209ENST00000448940 MTIF3Q9H2K0 278 aaKnown RBP6.78□□□□□ -1.32
CDC42BPA-209ENST00000448940 CRB1P82279 1406 aa6.78□□□□□ -1.32
CDC42BPA-209ENST00000448940 IRS4O14654 1257 aaPredicted RBP6.78□□□□□ -1.32
CDC42BPA-209ENST00000448940 SSFA2P28290 1259 aa6.78□□□□□ -1.32
CDC42BPA-209ENST00000448940 CRKLP46109 303 aaKnown RBP6.78□□□□□ -1.32
CDC42BPA-209ENST00000448940 MTHFSDQ2M296 383 aaKnown RBP6.78□□□□□ -1.32
CDC42BPA-209ENST00000448940 B4GALNT3Q6L9W6 998 aa6.78□□□□□ -1.32
CDC42BPA-209ENST00000448940 ZMYND15Q9H091 742 aa6.78□□□□□ -1.32
CDC42BPA-209ENST00000448940 AATKQ6ZMQ8 1374 aa6.78□□□□□ -1.32
CDC42BPA-209ENST00000448940 RALYLQ86SE5 291 aaKnown RBP6.78□□□□□ -1.32
CDC42BPA-209ENST00000448940 DZIP1LQ8IYY4 767 aaKnown RBP6.78□□□□□ -1.32
CDC42BPA-209ENST00000448940 MAP3K5Q99683 1374 aa6.78□□□□□ -1.32
CDC42BPA-209ENST00000448940 ADGBQ8N7X0 1667 aa6.78□□□□□ -1.32
CDC42BPA-209ENST00000448940 RPS6KA4O75676 772 aa6.78□□□□□ -1.32
CDC42BPA-209ENST00000448940 GNAI2P04899 355 aa6.78□□□□□ -1.32
CDC42BPA-209ENST00000448940 PABPC4Q13310 644 aaKnown RBP eCLIP6.78□□□□□ -1.322e-8■□□□□ 11
Retrieved 100 of 20,778 RNA–protein pairs in 118.2 ms