RNA–Protein interactions for RNA: ENST00000448526.6

CDKN1A-204, Transcript of cyclin dependent kinase inhibitor 1A, humanhuman

APPRIS P1 TSL 3 BASIC

Gene CDKN1A, Length 2,104 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN1A-204ENST00000448526 TTC5Q8N0Z6 440 aa20.82■□□□□ 0.92
CDKN1A-204ENST00000448526 PKP1Q13835 747 aa20.81■□□□□ 0.92
CDKN1A-204ENST00000448526 CLASRPQ8N2M8 674 aaKnown RBP20.81■□□□□ 0.92
CDKN1A-204ENST00000448526 MYD88Q99836 296 aa20.81■□□□□ 0.92
CDKN1A-204ENST00000448526 HDAC5Q9UQL6 1122 aa20.81■□□□□ 0.92
CDKN1A-204ENST00000448526 CYP2E1P05181 493 aaPredicted RBP20.81■□□□□ 0.92
CDKN1A-204ENST00000448526 MCCP23508 829 aa20.81■□□□□ 0.92
CDKN1A-204ENST00000448526 CABP4P57796 275 aa20.81■□□□□ 0.92
CDKN1A-204ENST00000448526 TTC41PQ6P2S7 1318 aa20.81■□□□□ 0.92
CDKN1A-204ENST00000448526 FMNL2Q96PY5 1086 aa20.81■□□□□ 0.92
CDKN1A-204ENST00000448526 METTL22Q9BUU2 404 aaPredicted RBP20.81■□□□□ 0.92
CDKN1A-204ENST00000448526 SASH1O94885 1247 aa20.8■□□□□ 0.92
CDKN1A-204ENST00000448526 ANAPC15P60006 121 aa20.8■□□□□ 0.92
CDKN1A-204ENST00000448526 GCKRQ14397 625 aa20.8■□□□□ 0.92
CDKN1A-204ENST00000448526 CLEC17AQ6ZS10 378 aa20.8■□□□□ 0.92
CDKN1A-204ENST00000448526 CNTROBQ8N137 903 aa20.8■□□□□ 0.92
CDKN1A-204ENST00000448526 IL17RAQ96F46 866 aa20.8■□□□□ 0.92
CDKN1A-204ENST00000448526 SGSM2O43147 1006 aa20.8■□□□□ 0.92
CDKN1A-204ENST00000448526 EPHA10Q5JZY3 1008 aa20.8■□□□□ 0.92
CDKN1A-204ENST00000448526 PRDM11Q9NQV5 511 aa20.8■□□□□ 0.92
CDKN1A-204ENST00000448526 SOS2Q07890 1332 aaPredicted RBP20.79■□□□□ 0.92
CDKN1A-204ENST00000448526 WDR17Q8IZU2 1322 aa20.79■□□□□ 0.92
CDKN1A-204ENST00000448526 PARP4Q9UKK3 1724 aaKnown RBP20.79■□□□□ 0.92
CDKN1A-204ENST00000448526 GLRX3O76003 335 aaKnown RBP20.79■□□□□ 0.92
CDKN1A-204ENST00000448526 ANKRD13DQ6ZTN6 518 aa20.79■□□□□ 0.92
CDKN1A-204ENST00000448526 ZNF335Q9H4Z2 1342 aaPredicted RBP20.78■□□□□ 0.92
CDKN1A-204ENST00000448526 FSD2A1L4K1 749 aa20.78■□□□□ 0.92
CDKN1A-204ENST00000448526 NEXNQ0ZGT2 675 aa20.78■□□□□ 0.92
CDKN1A-204ENST00000448526 ERC1Q8IUD2 1116 aa20.78■□□□□ 0.92
CDKN1A-204ENST00000448526 TMX3Q96JJ7 454 aa20.78■□□□□ 0.92
CDKN1A-204ENST00000448526 SLAIN2Q9P270 581 aa20.78■□□□□ 0.92
CDKN1A-204ENST00000448526 BAG4O95429 457 aaKnown RBP20.78■□□□□ 0.92
CDKN1A-204ENST00000448526 JARID2Q92833 1246 aaPredicted RBP20.78■□□□□ 0.92
CDKN1A-204ENST00000448526 CWC22Q9HCG8 908 aaKnown RBP20.78■□□□□ 0.92
CDKN1A-204ENST00000448526 HSPA4P34932 840 aa20.77■□□□□ 0.92
CDKN1A-204ENST00000448526 KLHDC4Q8TBB5 520 aa20.77■□□□□ 0.92
CDKN1A-204ENST00000448526 ECHDC1Q9NTX5 307 aa20.77■□□□□ 0.92
CDKN1A-204ENST00000448526 NUCB2P80303 420 aa20.77■□□□□ 0.91
CDKN1A-204ENST00000448526 TOM1L2Q6ZVM7 507 aa20.77■□□□□ 0.91
CDKN1A-204ENST00000448526 AACSQ86V21 672 aa20.77■□□□□ 0.91
CDKN1A-204ENST00000448526 LSG1Q9H089 658 aaKnown RBP20.77■□□□□ 0.91
CDKN1A-204ENST00000448526 COL5A2P05997 1499 aaPredicted RBP20.76■□□□□ 0.91
CDKN1A-204ENST00000448526 EPB41L2O43491 1005 aaKnown RBP20.76■□□□□ 0.91
CDKN1A-204ENST00000448526 IFIT2P09913 472 aaKnown RBP20.76■□□□□ 0.91
CDKN1A-204ENST00000448526 EAF2Q96CJ1 260 aaPredicted RBP20.76■□□□□ 0.91
CDKN1A-204ENST00000448526 ARXQ96QS3 562 aa20.76■□□□□ 0.91
CDKN1A-204ENST00000448526 UPF3BQ9BZI7 483 aaKnown RBP20.76■□□□□ 0.91
CDKN1A-204ENST00000448526 SIL1Q9H173 461 aa20.76■□□□□ 0.91
CDKN1A-204ENST00000448526 ZDHHC9Q9Y397 364 aa20.76■□□□□ 0.91
CDKN1A-204ENST00000448526 AFDNP55196 1824 aaKnown RBP20.76■□□□□ 0.91
CDKN1A-204ENST00000448526 ARFGEF2Q9Y6D5 1785 aa20.76■□□□□ 0.91
CDKN1A-204ENST00000448526 RAD50Q92878 1312 aa20.76■□□□□ 0.91
CDKN1A-204ENST00000448526 G3BP1Q13283 466 aaKnown RBP eCLIP20.75■□□□□ 0.91
CDKN1A-204ENST00000448526 CWC27Q6UX04 472 aaKnown RBP20.75■□□□□ 0.91
CDKN1A-204ENST00000448526 ZCRB1Q8TBF4 217 aaKnown RBP20.75■□□□□ 0.91
CDKN1A-204ENST00000448526 LAMB4A4D0S4 1761 aa20.75■□□□□ 0.91
CDKN1A-204ENST00000448526 L1TD1Q5T7N2 865 aaKnown RBP20.74■□□□□ 0.91
CDKN1A-204ENST00000448526 TLR7Q9NYK1 1049 aaKnown RBP20.74■□□□□ 0.91
CDKN1A-204ENST00000448526 ABCA3Q99758 1704 aa20.74■□□□□ 0.91
CDKN1A-204ENST00000448526 GOLGA6L3A6NEY3 463 aa20.74■□□□□ 0.91
CDKN1A-204ENST00000448526 MCM2P49736 904 aa20.74■□□□□ 0.91
CDKN1A-204ENST00000448526 NOL8Q76FK4 1167 aaKnown RBP20.74■□□□□ 0.91
CDKN1A-204ENST00000448526 CCDC8Q9H0W5 538 aaPredicted RBP20.74■□□□□ 0.91
CDKN1A-204ENST00000448526 PCDH11XQ9BZA7 1347 aa20.73■□□□□ 0.91
CDKN1A-204ENST00000448526 PCDH11YQ9BZA8 1340 aa20.73■□□□□ 0.91
CDKN1A-204ENST00000448526 ATP5J2-PTCD1G3V325 749 aa20.73■□□□□ 0.91
CDKN1A-204ENST00000448526 PTCD1O75127 700 aaKnown RBP20.73■□□□□ 0.91
CDKN1A-204ENST00000448526 CUL4AQ13619 759 aa20.73■□□□□ 0.91
CDKN1A-204ENST00000448526 NBPF26B4DH59 902 aa20.72■□□□□ 0.91
CDKN1A-204ENST00000448526 NBPF14Q5TI25 921 aa20.72■□□□□ 0.91
CDKN1A-204ENST00000448526 NBPF10Q6P3W6 841 aaKnown RBP20.72■□□□□ 0.91
CDKN1A-204ENST00000448526 NBPF15Q8N660 670 aa20.72■□□□□ 0.91
CDKN1A-204ENST00000448526 KDM4FA0A1W2PPD8 638 aa20.72■□□□□ 0.91
CDKN1A-204ENST00000448526 XRCC6P12956 609 aaKnown RBP eCLIP20.72■□□□□ 0.91
CDKN1A-204ENST00000448526 RASEFQ8IZ41 740 aa20.72■□□□□ 0.91
CDKN1A-204ENST00000448526 GPATCH3Q96I76 525 aa20.72■□□□□ 0.91
CDKN1A-204ENST00000448526 SNX14Q9Y5W7 946 aa20.72■□□□□ 0.91
CDKN1A-204ENST00000448526 SHANK3Q9BYB0 1731 aa20.71■□□□□ 0.91
CDKN1A-204ENST00000448526 SKOR2Q2VWA4 1001 aaPredicted RBP20.71■□□□□ 0.91
CDKN1A-204ENST00000448526 UBR2Q8IWV8 1755 aa20.71■□□□□ 0.91
CDKN1A-204ENST00000448526 PTMSP20962 102 aa20.71■□□□□ 0.91
CDKN1A-204ENST00000448526 RFX5P48382 616 aaPredicted RBP20.71■□□□□ 0.91
CDKN1A-204ENST00000448526 UBE3BQ7Z3V4 1068 aa20.71■□□□□ 0.91
CDKN1A-204ENST00000448526 DIAPH3Q9NSV4 1193 aa20.71■□□□□ 0.91
CDKN1A-204ENST00000448526 MCTP1Q6DN14 999 aa20.7■□□□□ 0.9
CDKN1A-204ENST00000448526 RTN4Q9NQC3 1192 aaKnown RBP20.7■□□□□ 0.9
CDKN1A-204ENST00000448526 PTH1RQ03431 593 aa20.69■□□□□ 0.9
CDKN1A-204ENST00000448526 PLBD2Q8NHP8 589 aa20.69■□□□□ 0.9
CDKN1A-204ENST00000448526 CARD10Q9BWT7 1032 aa20.69■□□□□ 0.9
CDKN1A-204ENST00000448526 ERVV-2B6SEH9 535 aa20.69■□□□□ 0.9
CDKN1A-204ENST00000448526 IL2RBP14784 551 aa20.69■□□□□ 0.9
CDKN1A-204ENST00000448526 CASP7P55210 303 aa20.69■□□□□ 0.9
CDKN1A-204ENST00000448526 NKX1-1Q15270 411 aaPredicted RBP20.69■□□□□ 0.9
CDKN1A-204ENST00000448526 EVI5LQ96CN4 794 aa20.69■□□□□ 0.9
CDKN1A-204ENST00000448526 STRN4Q9NRL3 753 aa20.69■□□□□ 0.9
CDKN1A-204ENST00000448526 KCPQ6ZWJ8 1503 aa20.69■□□□□ 0.9
CDKN1A-204ENST00000448526 GOLGA6L22H0YM25 854 aa20.68■□□□□ 0.9
CDKN1A-204ENST00000448526 DDX54Q8TDD1 881 aaKnown RBP20.68■□□□□ 0.9
CDKN1A-204ENST00000448526 CHAMP1Q96JM3 812 aa20.68■□□□□ 0.9
CDKN1A-204ENST00000448526 A0A087WZG4 1122 aa20.68■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms