RNA–Protein interactions for RNA: ENST00000448223.6

SMC6-207, Transcript of structural maintenance of chromosomes 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMC6, Length 5,233 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC6-207ENST00000448223 NOLC1Q14978 699 aaKnown RBP eCLIP10.72□□□□□ -0.69
SMC6-207ENST00000448223 RPGRIP1LQ68CZ1 1315 aa10.72□□□□□ -0.69
SMC6-207ENST00000448223 SDSP20132 328 aa10.72□□□□□ -0.69
SMC6-207ENST00000448223 OSCARQ8IYS5 282 aa10.72□□□□□ -0.69
SMC6-207ENST00000448223 ZNF396Q96N95 335 aaPredicted RBP10.72□□□□□ -0.69
SMC6-207ENST00000448223 ARFGAP3Q9NP61 516 aa10.72□□□□□ -0.69
SMC6-207ENST00000448223 GABPB1Q06547 395 aaPredicted RBP10.72□□□□□ -0.69
SMC6-207ENST00000448223 CEP135Q66GS9 1140 aa10.72□□□□□ -0.69
SMC6-207ENST00000448223 TRMT1Q9NXH9 659 aaKnown RBP10.72□□□□□ -0.69
SMC6-207ENST00000448223 ZBTB7BO15156 539 aaPredicted RBP10.72□□□□□ -0.69
SMC6-207ENST00000448223 KIF5CO60282 957 aa10.72□□□□□ -0.69
SMC6-207ENST00000448223 CLNS1AP54105 237 aaKnown RBP10.72□□□□□ -0.69
SMC6-207ENST00000448223 MAP3K11Q16584 847 aa10.72□□□□□ -0.69
SMC6-207ENST00000448223 DZIP1Q86YF9 867 aaKnown RBP10.72□□□□□ -0.69
SMC6-207ENST00000448223 OTUD6BQ8N6M0 293 aa10.72□□□□□ -0.69
SMC6-207ENST00000448223 ZNF330Q9Y3S2 320 aaPredicted RBP10.72□□□□□ -0.69
SMC6-207ENST00000448223 SPHKAPQ2M3C7 1700 aa10.72□□□□□ -0.69
SMC6-207ENST00000448223 ZNF518AQ6AHZ1 1483 aa10.72□□□□□ -0.69
SMC6-207ENST00000448223 ATP6V1AP38606 617 aa10.71□□□□□ -0.69
SMC6-207ENST00000448223 NLRP6P59044 892 aa10.71□□□□□ -0.69
SMC6-207ENST00000448223 AIMP1Q12904 312 aaKnown RBP10.71□□□□□ -0.69
SMC6-207ENST00000448223 ALDH1L2Q3SY69 923 aa10.71□□□□□ -0.69
SMC6-207ENST00000448223 MRPL50Q8N5N7 158 aaKnown RBP10.71□□□□□ -0.69
SMC6-207ENST00000448223 USHBP1Q8N6Y0 703 aa10.71□□□□□ -0.69
SMC6-207ENST00000448223 NEBLO76041 1014 aa10.71□□□□□ -0.69
SMC6-207ENST00000448223 MSL1Q68DK7 614 aa10.71□□□□□ -0.69
SMC6-207ENST00000448223 DACH1Q9UI36 760 aa10.71□□□□□ -0.69
SMC6-207ENST00000448223 ANXA1P04083 346 aa10.71□□□□□ -0.69
SMC6-207ENST00000448223 SRRTQ9BXP5 876 aaKnown RBP10.71□□□□□ -0.69
SMC6-207ENST00000448223 CLIP2Q9UDT6 1046 aa10.71□□□□□ -0.69
SMC6-207ENST00000448223 ZKSCAN5Q9Y2L8 839 aa10.71□□□□□ -0.69
SMC6-207ENST00000448223 NSD2O96028 1365 aa10.71□□□□□ -0.7
SMC6-207ENST00000448223 ABCC11Q96J66 1382 aa10.71□□□□□ -0.7
SMC6-207ENST00000448223 ERC1Q8IUD2 1116 aa10.71□□□□□ -0.7
SMC6-207ENST00000448223 UTP3Q9NQZ2 479 aaKnown RBP eCLIP10.71□□□□□ -0.74e-6■■■■■ 85.7
SMC6-207ENST00000448223 CCDC160A6NGH7 325 aa10.71□□□□□ -0.7
SMC6-207ENST00000448223 ERC2O15083 957 aa10.71□□□□□ -0.7
SMC6-207ENST00000448223 ATP2C2O75185 946 aa10.71□□□□□ -0.7
SMC6-207ENST00000448223 ZNF397Q8NF99 534 aaPredicted RBP10.71□□□□□ -0.7
SMC6-207ENST00000448223 SCLT1Q96NL6 688 aa10.71□□□□□ -0.7
SMC6-207ENST00000448223 CCDC113Q9H0I3 377 aa10.71□□□□□ -0.7
SMC6-207ENST00000448223 FAM184BQ9ULE4 1060 aa10.71□□□□□ -0.7
SMC6-207ENST00000448223 PSMA5P28066 241 aa10.7□□□□□ -0.7
SMC6-207ENST00000448223 STK38Q15208 465 aa10.7□□□□□ -0.7
SMC6-207ENST00000448223 CCDC6Q16204 474 aa10.7□□□□□ -0.7
SMC6-207ENST00000448223 KRBA2Q6ZNG9 492 aa10.7□□□□□ -0.7
SMC6-207ENST00000448223 FSD2A1L4K1 749 aa10.7□□□□□ -0.7
SMC6-207ENST00000448223 SMTNL1A8MU46 457 aa10.7□□□□□ -0.7
SMC6-207ENST00000448223 RPAINQ86UA6 219 aa10.7□□□□□ -0.7
SMC6-207ENST00000448223 LRRFIP1Q32MZ4 808 aaKnown RBP10.7□□□□□ -0.7
SMC6-207ENST00000448223 FBF1Q8TES7 1133 aa10.7□□□□□ -0.7
SMC6-207ENST00000448223 SNX21Q969T3 373 aa10.7□□□□□ -0.7
SMC6-207ENST00000448223 CFAP57Q96MR6 1250 aa10.7□□□□□ -0.7
SMC6-207ENST00000448223 TCHPQ9BT92 498 aa10.7□□□□□ -0.7
SMC6-207ENST00000448223 PPM1EQ8WY54 764 aa10.7□□□□□ -0.7
SMC6-207ENST00000448223 SLC52A1Q9NWF4 448 aa10.7□□□□□ -0.7
SMC6-207ENST00000448223 TRDNQ13061 729 aa10.69□□□□□ -0.7
SMC6-207ENST00000448223 RAB3GAP1Q15042 981 aa10.69□□□□□ -0.7
SMC6-207ENST00000448223 ZNF830Q96NB3 372 aaPredicted RBP10.69□□□□□ -0.7
SMC6-207ENST00000448223 ABCA6Q8N139 1617 aa10.69□□□□□ -0.7
SMC6-207ENST00000448223 IL16Q14005 1332 aa10.69□□□□□ -0.7
SMC6-207ENST00000448223 ADCY5O95622 1261 aa10.69□□□□□ -0.7
SMC6-207ENST00000448223 UBTFL1P0CB47 393 aaPredicted RBP10.69□□□□□ -0.7
SMC6-207ENST00000448223 CEBPZQ03701 1054 aaKnown RBP10.69□□□□□ -0.7
SMC6-207ENST00000448223 IFFO1Q0D2I5 559 aa10.69□□□□□ -0.7
SMC6-207ENST00000448223 SNW1Q13573 536 aaKnown RBP10.69□□□□□ -0.7
SMC6-207ENST00000448223 CCDC183Q5T5S1 534 aa10.69□□□□□ -0.7
SMC6-207ENST00000448223 MIPOL1Q8TD10 442 aa10.69□□□□□ -0.7
SMC6-207ENST00000448223 V9GYY5 206 aaPredicted RBP10.69□□□□□ -0.7
SMC6-207ENST00000448223 MAP3K4Q9Y6R4 1608 aa10.69□□□□□ -0.7
SMC6-207ENST00000448223 ZFYVE16Q7Z3T8 1539 aa10.69□□□□□ -0.7
SMC6-207ENST00000448223 PLEKHM2Q8IWE5 1019 aa10.69□□□□□ -0.7
SMC6-207ENST00000448223 PSMD1Q99460 953 aa10.69□□□□□ -0.7
SMC6-207ENST00000448223 HYPKQ9NX55 129 aa10.69□□□□□ -0.7
SMC6-207ENST00000448223 PRIM1P49642 420 aaKnown RBP10.69□□□□□ -0.7
SMC6-207ENST00000448223 CFAP100Q494V2 611 aa10.69□□□□□ -0.7
SMC6-207ENST00000448223 CERS3Q8IU89 383 aa10.69□□□□□ -0.7
SMC6-207ENST00000448223 PHF23Q9BUL5 403 aaPredicted RBP10.69□□□□□ -0.7
SMC6-207ENST00000448223 KIF3CO14782 793 aa10.68□□□□□ -0.7
SMC6-207ENST00000448223 CWC27Q6UX04 472 aaKnown RBP10.68□□□□□ -0.7
SMC6-207ENST00000448223 G2E3Q7L622 706 aa10.68□□□□□ -0.7
SMC6-207ENST00000448223 PLEKHF1Q96S99 279 aa10.68□□□□□ -0.7
SMC6-207ENST00000448223 CD109Q6YHK3 1445 aa10.68□□□□□ -0.7
SMC6-207ENST00000448223 GNAI2P04899 355 aa10.68□□□□□ -0.7
SMC6-207ENST00000448223 ZFYP08048 801 aaPredicted RBP10.68□□□□□ -0.7
SMC6-207ENST00000448223 HS1BP3Q53T59 392 aa10.68□□□□□ -0.7
SMC6-207ENST00000448223 C6orf163Q5TEZ5 329 aa10.68□□□□□ -0.7
SMC6-207ENST00000448223 CCDC61Q9Y6R9 512 aa10.68□□□□□ -0.7
SMC6-207ENST00000448223 MYOM2P54296 1465 aa10.68□□□□□ -0.7
SMC6-207ENST00000448223 TTC22Q5TAA0 569 aa10.68□□□□□ -0.7
SMC6-207ENST00000448223 CCDC121Q6ZUS5 278 aa10.68□□□□□ -0.7
SMC6-207ENST00000448223 FERMT3Q86UX7 667 aa10.68□□□□□ -0.7
SMC6-207ENST00000448223 CHD1O14646 1710 aa10.68□□□□□ -0.7
SMC6-207ENST00000448223 PPFIA3O75145 1194 aa10.68□□□□□ -0.7
SMC6-207ENST00000448223 JMYQ8N9B5 988 aa10.68□□□□□ -0.7
SMC6-207ENST00000448223 TAF4BQ92750 862 aa10.68□□□□□ -0.7
SMC6-207ENST00000448223 C9orf78Q9NZ63 289 aaPredicted RBP10.68□□□□□ -0.7
SMC6-207ENST00000448223 CEP152O94986 1710 aa10.68□□□□□ -0.7
SMC6-207ENST00000448223 SBNO2Q9Y2G9 1366 aa10.68□□□□□ -0.7
SMC6-207ENST00000448223 CCDC171Q6TFL3 1326 aa10.67□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms