RNA–Protein interactions for RNA: ENST00000447696.5

MRPL28-205, Transcript of mitochondrial ribosomal protein L28, humanhuman

TSL 3

Gene MRPL28, Length 722 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL28-205ENST00000447696 CHL1O00533 1208 aa31.38■■■□□ 2.61
MRPL28-205ENST00000447696 CHRNA5P30532 468 aa31.37■■■□□ 2.61
MRPL28-205ENST00000447696 DALRD3Q5D0E6 543 aaKnown RBP31.36■■■□□ 2.61
MRPL28-205ENST00000447696 C16orf71Q8IYS4 520 aaPredicted RBP31.36■■■□□ 2.61
MRPL28-205ENST00000447696 APAF1O14727 1248 aa31.35■■■□□ 2.61
MRPL28-205ENST00000447696 CCDC184Q52MB2 194 aa31.35■■■□□ 2.61
MRPL28-205ENST00000447696 ARFGEF1Q9Y6D6 1849 aa31.34■■■□□ 2.61
MRPL28-205ENST00000447696 PRR5LQ6MZQ0 368 aa31.34■■■□□ 2.61
MRPL28-205ENST00000447696 NMRK2Q9NPI5 230 aa31.34■■■□□ 2.61
MRPL28-205ENST00000447696 PDZRN3Q9UPQ7 1066 aa31.34■■■□□ 2.61
MRPL28-205ENST00000447696 FSTL1Q12841 308 aa31.33■■■□□ 2.61
MRPL28-205ENST00000447696 CNBD1Q8NA66 436 aa31.33■■■□□ 2.61
MRPL28-205ENST00000447696 BRIP1Q9BX63 1249 aa31.33■■■□□ 2.61
MRPL28-205ENST00000447696 ERVV-1B6SEH8 477 aa31.32■■■□□ 2.6
MRPL28-205ENST00000447696 DLEC1Q9Y238 1755 aa31.32■■■□□ 2.6
MRPL28-205ENST00000447696 CALD1Q05682 793 aaKnown RBP31.31■■■□□ 2.6
MRPL28-205ENST00000447696 CFAP44Q96MT7 982 aa31.31■■■□□ 2.6
MRPL28-205ENST00000447696 KDM2BQ8NHM5 1336 aa31.3■■■□□ 2.6
MRPL28-205ENST00000447696 PDE6BP35913 854 aa31.3■■■□□ 2.6
MRPL28-205ENST00000447696 C9orf131Q5VYM1 1079 aa31.3■■■□□ 2.6
MRPL28-205ENST00000447696 C2CD5Q86YS7 1000 aa31.3■■■□□ 2.6
MRPL28-205ENST00000447696 LAS1LQ9Y4W2 734 aaKnown RBP31.3■■■□□ 2.6
MRPL28-205ENST00000447696 MAP3K15Q6ZN16 1313 aa31.29■■■□□ 2.6
MRPL28-205ENST00000447696 H0YIN7 160 aa31.29■■■□□ 2.6
MRPL28-205ENST00000447696 MYL6BP14649 208 aa31.29■■■□□ 2.6
MRPL28-205ENST00000447696 ST5P78524 1137 aa31.29■■■□□ 2.6
MRPL28-205ENST00000447696 KIF6Q6ZMV9 814 aa31.29■■■□□ 2.6
MRPL28-205ENST00000447696 MRS2Q9HD23 443 aa31.29■■■□□ 2.6
MRPL28-205ENST00000447696 ANKRD31Q8N7Z5 1873 aa31.29■■■□□ 2.6
MRPL28-205ENST00000447696 NPHP1O15259 732 aa31.28■■■□□ 2.6
MRPL28-205ENST00000447696 NGEFQ8N5V2 710 aa31.28■■■□□ 2.6
MRPL28-205ENST00000447696 NIP7Q9Y221 180 aaKnown RBP eCLIP31.28■■■□□ 2.6
MRPL28-205ENST00000447696 HOXB7P09629 217 aa31.27■■■□□ 2.6
MRPL28-205ENST00000447696 EIF2S2P20042 333 aaKnown RBP31.27■■■□□ 2.6
MRPL28-205ENST00000447696 HLFQ16534 295 aa31.27■■■□□ 2.6
MRPL28-205ENST00000447696 NBPF5PQ86XG9 351 aaPredicted RBP31.27■■■□□ 2.6
MRPL28-205ENST00000447696 KLRG1Q96E93 195 aa31.27■■■□□ 2.6
MRPL28-205ENST00000447696 PDIA6Q15084 440 aa31.26■■■□□ 2.59
MRPL28-205ENST00000447696 TTLL7Q6ZT98 887 aa31.26■■■□□ 2.59
MRPL28-205ENST00000447696 LRP10Q7Z4F1 713 aa31.26■■■□□ 2.59
MRPL28-205ENST00000447696 ZNF853P0CG23 659 aa31.25■■■□□ 2.59
MRPL28-205ENST00000447696 JMYQ8N9B5 988 aa31.25■■■□□ 2.59
MRPL28-205ENST00000447696 IFT57Q9NWB7 429 aa31.25■■■□□ 2.59
MRPL28-205ENST00000447696 TTLL6Q8N841 843 aa31.24■■■□□ 2.59
MRPL28-205ENST00000447696 GNAI1P63096 354 aa31.23■■■□□ 2.59
MRPL28-205ENST00000447696 TPTE2Q6XPS3 522 aa31.23■■■□□ 2.59
MRPL28-205ENST00000447696 MBIPQ9NS73 344 aa31.23■■■□□ 2.59
MRPL28-205ENST00000447696 WDR90Q96KV7 1748 aa31.22■■■□□ 2.59
MRPL28-205ENST00000447696 KRT24Q2M2I5 525 aa31.22■■■□□ 2.59
MRPL28-205ENST00000447696 CCDC24Q8N4L8 307 aa31.22■■■□□ 2.59
MRPL28-205ENST00000447696 COL11A2P13942 1736 aaPredicted RBP31.21■■■□□ 2.59
MRPL28-205ENST00000447696 NUP98P52948 1817 aa31.2■■■□□ 2.59
MRPL28-205ENST00000447696 PROSER3Q2NL68 480 aa31.2■■■□□ 2.59
MRPL28-205ENST00000447696 ZBTB3Q9H5J0 574 aa31.2■■■□□ 2.59
MRPL28-205ENST00000447696 DDX21Q9NR30 783 aaKnown RBP eCLIP31.2■■■□□ 2.59
MRPL28-205ENST00000447696 IBTKQ9P2D0 1353 aaPredicted RBP31.19■■■□□ 2.58
MRPL28-205ENST00000447696 CCDC27Q2M243 656 aa31.19■■■□□ 2.58
MRPL28-205ENST00000447696 NCBP3Q53F19 620 aaKnown RBP31.19■■■□□ 2.58
MRPL28-205ENST00000447696 GIGYF2Q6Y7W6 1299 aaKnown RBP31.19■■■□□ 2.58
MRPL28-205ENST00000447696 RNF181Q9P0P0 153 aa31.19■■■□□ 2.58
MRPL28-205ENST00000447696 NYXQ9GZU5 481 aa31.18■■■□□ 2.58
MRPL28-205ENST00000447696 SRGNP10124 158 aa31.17■■■□□ 2.58
MRPL28-205ENST00000447696 HDGFL1Q5TGJ6 251 aa31.17■■■□□ 2.58
MRPL28-205ENST00000447696 STYK1Q6J9G0 422 aa31.17■■■□□ 2.58
MRPL28-205ENST00000447696 NECTIN2Q92692 538 aa31.17■■■□□ 2.58
MRPL28-205ENST00000447696 ZNF622Q969S3 477 aaKnown RBP eCLIP31.17■■■□□ 2.58
MRPL28-205ENST00000447696 ZC3H4Q9UPT8 1303 aaKnown RBP31.17■■■□□ 2.58
MRPL28-205ENST00000447696 KLRG2A4D1S0 409 aaPredicted RBP31.16■■■□□ 2.58
MRPL28-205ENST00000447696 ANXA1P04083 346 aa31.16■■■□□ 2.58
MRPL28-205ENST00000447696 DUSP27Q5VZP5 1158 aa31.16■■■□□ 2.58
MRPL28-205ENST00000447696 ZNF34Q8IZ26 560 aa31.15■■■□□ 2.58
MRPL28-205ENST00000447696 SMC1BQ8NDV3 1235 aa31.15■■■□□ 2.58
MRPL28-205ENST00000447696 CNKSR1Q969H4 720 aa31.15■■■□□ 2.58
MRPL28-205ENST00000447696 MASTLQ96GX5 879 aa31.15■■■□□ 2.58
MRPL28-205ENST00000447696 CHPF2Q9P2E5 772 aa31.14■■■□□ 2.58
MRPL28-205ENST00000447696 FAM177BA6PVY3 158 aa31.13■■■□□ 2.57
MRPL28-205ENST00000447696 GTF2E1P29083 439 aaPredicted RBP31.13■■■□□ 2.57
MRPL28-205ENST00000447696 COPS6Q7L5N1 327 aa31.13■■■□□ 2.57
MRPL28-205ENST00000447696 XAGE3Q8WTP9 111 aa31.13■■■□□ 2.57
MRPL28-205ENST00000447696 RRAGCQ9HB90 399 aa31.13■■■□□ 2.57
MRPL28-205ENST00000447696 DBF4Q9UBU7 674 aaPredicted RBP31.13■■■□□ 2.57
MRPL28-205ENST00000447696 UBN2Q6ZU65 1347 aa31.13■■■□□ 2.57
MRPL28-205ENST00000447696 PARP10Q53GL7 1025 aa31.12■■■□□ 2.57
MRPL28-205ENST00000447696 RIC1Q4ADV7 1423 aa31.12■■■□□ 2.57
MRPL28-205ENST00000447696 GPTP24298 496 aa31.11■■■□□ 2.57
MRPL28-205ENST00000447696 WWC1Q8IX03 1113 aa31.11■■■□□ 2.57
MRPL28-205ENST00000447696 NPR1P16066 1061 aa31.1■■■□□ 2.57
MRPL28-205ENST00000447696 HSP90AB3PQ58FF7 597 aa31.1■■■□□ 2.57
MRPL28-205ENST00000447696 COL13A1Q5TAT6 717 aaPredicted RBP31.1■■■□□ 2.57
MRPL28-205ENST00000447696 HTRA3P83110 453 aa31.09■■■□□ 2.57
MRPL28-205ENST00000447696 ARFGEF2Q9Y6D5 1785 aa31.09■■■□□ 2.57
MRPL28-205ENST00000447696 TNRC6CQ9HCJ0 1690 aaKnown RBP31.09■■■□□ 2.57
MRPL28-205ENST00000447696 ABCC12Q96J65 1359 aa31.08■■■□□ 2.57
MRPL28-205ENST00000447696 IL16Q14005 1332 aa31.08■■■□□ 2.57
MRPL28-205ENST00000447696 AIMP1Q12904 312 aaKnown RBP31.08■■■□□ 2.57
MRPL28-205ENST00000447696 SUSD4Q5VX71 490 aa31.08■■■□□ 2.57
MRPL28-205ENST00000447696 PPP1R42Q7Z4L9 355 aa31.08■■■□□ 2.57
MRPL28-205ENST00000447696 HYPKQ9NX55 129 aa31.08■■■□□ 2.57
MRPL28-205ENST00000447696 NTSR2O95665 410 aa31.07■■■□□ 2.56
MRPL28-205ENST00000447696 PRPF40BQ6NWY9 871 aaKnown RBP31.07■■■□□ 2.56
Retrieved 100 of 20,778 RNA–protein pairs in 266.5 ms