RNA–Protein interactions for RNA: ENST00000447456.1

CCDC18-205, Transcript of coiled-coil domain containing 18, humanhuman

TSL 1 (best)

Gene CCDC18, Length 687 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC18-205ENST00000447456 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP11.72□□□□□ -0.53
CCDC18-205ENST00000447456 ERVV-1B6SEH8 477 aa11.72□□□□□ -0.53
CCDC18-205ENST00000447456 RGL2O15211 777 aa11.72□□□□□ -0.53
CCDC18-205ENST00000447456 NEXNQ0ZGT2 675 aa11.72□□□□□ -0.53
CCDC18-205ENST00000447456 SLC15A2Q16348 729 aa11.72□□□□□ -0.53
CCDC18-205ENST00000447456 KSR2Q6VAB6 950 aa11.72□□□□□ -0.53
CCDC18-205ENST00000447456 G2E3Q7L622 706 aa11.72□□□□□ -0.53
CCDC18-205ENST00000447456 LRP10Q7Z4F1 713 aa11.72□□□□□ -0.53
CCDC18-205ENST00000447456 RIC3Q7Z5B4 369 aa11.72□□□□□ -0.53
CCDC18-205ENST00000447456 FTSJ3Q8IY81 847 aaKnown RBP11.72□□□□□ -0.53
CCDC18-205ENST00000447456 PLBD2Q8NHP8 589 aa11.72□□□□□ -0.53
CCDC18-205ENST00000447456 MAP3K15Q6ZN16 1313 aa11.71□□□□□ -0.53
CCDC18-205ENST00000447456 PHF14O94880 888 aa11.71□□□□□ -0.53
CCDC18-205ENST00000447456 RRP1P56182 461 aaKnown RBP11.71□□□□□ -0.53
CCDC18-205ENST00000447456 HSP90AB3PQ58FF7 597 aa11.71□□□□□ -0.53
CCDC18-205ENST00000447456 SUPT16HQ9Y5B9 1047 aaKnown RBP11.71□□□□□ -0.53
CCDC18-205ENST00000447456 NUP188Q5SRE5 1749 aa11.71□□□□□ -0.54
CCDC18-205ENST00000447456 PI4KAP2A4QPH2 592 aa11.7□□□□□ -0.54
CCDC18-205ENST00000447456 PDE3AQ14432 1141 aa11.7□□□□□ -0.54
CCDC18-205ENST00000447456 ZNF827Q17R98 1081 aa11.7□□□□□ -0.54
CCDC18-205ENST00000447456 CLEC4GQ6UXB4 293 aa11.7□□□□□ -0.54
CCDC18-205ENST00000447456 TTLL7Q6ZT98 887 aa11.7□□□□□ -0.54
CCDC18-205ENST00000447456 DZIP1LQ8IYY4 767 aaKnown RBP11.7□□□□□ -0.54
CCDC18-205ENST00000447456 PI4KAP1Q8N8J0 262 aa11.7□□□□□ -0.54
CCDC18-205ENST00000447456 DNAAF4Q8WXU2 420 aa11.7□□□□□ -0.54
CCDC18-205ENST00000447456 ARHGEF1Q92888 912 aaKnown RBP11.7□□□□□ -0.54
CCDC18-205ENST00000447456 NARFQ9UHQ1 456 aa11.7□□□□□ -0.54
CCDC18-205ENST00000447456 TBC1D2BQ9UPU7 963 aa11.7□□□□□ -0.54
CCDC18-205ENST00000447456 UBR3Q6ZT12 1888 aa11.7□□□□□ -0.54
CCDC18-205ENST00000447456 CAMTA2O94983 1202 aa11.69□□□□□ -0.54
CCDC18-205ENST00000447456 TRIM27P14373 513 aa11.69□□□□□ -0.54
CCDC18-205ENST00000447456 CCT4P50991 539 aaKnown RBP11.69□□□□□ -0.54
CCDC18-205ENST00000447456 ZBTB3Q9H5J0 574 aa11.69□□□□□ -0.54
CCDC18-205ENST00000447456 ANO8Q9HCE9 1232 aaPredicted RBP11.69□□□□□ -0.54
CCDC18-205ENST00000447456 MAP3K2Q9Y2U5 619 aa11.69□□□□□ -0.54
CCDC18-205ENST00000447456 RNF123Q5XPI4 1314 aa11.68□□□□□ -0.54
CCDC18-205ENST00000447456 USP42Q9H9J4 1324 aaKnown RBP11.68□□□□□ -0.54
CCDC18-205ENST00000447456 SLC4A10Q6U841 1118 aa11.68□□□□□ -0.54
CCDC18-205ENST00000447456 GIGYF2Q6Y7W6 1299 aaKnown RBP11.68□□□□□ -0.54
CCDC18-205ENST00000447456 METTL22Q9BUU2 404 aaPredicted RBP11.68□□□□□ -0.54
CCDC18-205ENST00000447456 CHMP4BQ9H444 224 aaKnown RBP11.68□□□□□ -0.54
CCDC18-205ENST00000447456 ADCY9O60503 1353 aa11.67□□□□□ -0.54
CCDC18-205ENST00000447456 ABCC4O15439 1325 aa11.67□□□□□ -0.54
CCDC18-205ENST00000447456 QSER1Q2KHR3 1735 aa11.67□□□□□ -0.54
CCDC18-205ENST00000447456 F6X3S4 739 aa11.67□□□□□ -0.54
CCDC18-205ENST00000447456 PLIN1O60240 522 aa11.67□□□□□ -0.54
CCDC18-205ENST00000447456 NEFLP07196 543 aa11.67□□□□□ -0.54
CCDC18-205ENST00000447456 TCIRG1Q13488 830 aa11.67□□□□□ -0.54
CCDC18-205ENST00000447456 CLUAP1Q96AJ1 413 aa11.67□□□□□ -0.54
CCDC18-205ENST00000447456 SRCIN1Q9C0H9 1055 aa11.67□□□□□ -0.54
CCDC18-205ENST00000447456 PXDNLA1KZ92 1463 aa11.67□□□□□ -0.54
CCDC18-205ENST00000447456 PNPLA7Q6ZV29 1317 aa11.66□□□□□ -0.54
CCDC18-205ENST00000447456 SOCS7O14512 581 aa11.66□□□□□ -0.54
CCDC18-205ENST00000447456 ALDH1L1O75891 902 aa11.66□□□□□ -0.54
CCDC18-205ENST00000447456 TRIM28Q13263 835 aaKnown RBP11.66□□□□□ -0.54
CCDC18-205ENST00000447456 USPL1Q5W0Q7 1092 aa11.66□□□□□ -0.54
CCDC18-205ENST00000447456 INTS3Q68E01 1043 aaKnown RBP11.66□□□□□ -0.54
CCDC18-205ENST00000447456 COL23A1Q86Y22 540 aaPredicted RBP11.66□□□□□ -0.54
CCDC18-205ENST00000447456 NLGN1Q8N2Q7 840 aa11.66□□□□□ -0.54
CCDC18-205ENST00000447456 LINS1Q8NG48 757 aa11.66□□□□□ -0.54
CCDC18-205ENST00000447456 SLC16A10Q8TF71 515 aa11.66□□□□□ -0.54
CCDC18-205ENST00000447456 MYD88Q99836 296 aa11.66□□□□□ -0.54
CCDC18-205ENST00000447456 HDAC5Q9UQL6 1122 aa11.66□□□□□ -0.54
CCDC18-205ENST00000447456 ATP10DQ9P241 1426 aa11.66□□□□□ -0.54
CCDC18-205ENST00000447456 PARP10Q53GL7 1025 aa11.65□□□□□ -0.54
CCDC18-205ENST00000447456 AMIGO3Q86WK7 504 aa11.65□□□□□ -0.54
CCDC18-205ENST00000447456 CCDC191Q8NCU4 936 aa11.65□□□□□ -0.54
CCDC18-205ENST00000447456 SETDB2Q96T68 719 aa11.65□□□□□ -0.54
CCDC18-205ENST00000447456 SRP68Q9UHB9 627 aaKnown RBP11.65□□□□□ -0.54
CCDC18-205ENST00000447456 IBTKQ9P2D0 1353 aaPredicted RBP11.65□□□□□ -0.55
CCDC18-205ENST00000447456 SCN7AQ01118 1682 aa11.65□□□□□ -0.55
CCDC18-205ENST00000447456 ARFGEF2Q9Y6D5 1785 aa11.64□□□□□ -0.55
CCDC18-205ENST00000447456 HSP90B1P14625 803 aaKnown RBP11.64□□□□□ -0.55
CCDC18-205ENST00000447456 HLFQ16534 295 aa11.64□□□□□ -0.55
CCDC18-205ENST00000447456 BEND3Q5T5X7 828 aa11.64□□□□□ -0.55
CCDC18-205ENST00000447456 SMIM5Q71RC9 77 aa11.64□□□□□ -0.55
CCDC18-205ENST00000447456 PPP1R42Q7Z4L9 355 aa11.64□□□□□ -0.55
CCDC18-205ENST00000447456 ITPRIPQ8IWB1 547 aa11.64□□□□□ -0.55
CCDC18-205ENST00000447456 PANK1Q8TE04 598 aa11.64□□□□□ -0.55
CCDC18-205ENST00000447456 RNF39Q9H2S5 420 aa11.64□□□□□ -0.55
CCDC18-205ENST00000447456 CWC25Q9NXE8 425 aaPredicted RBP11.64□□□□□ -0.55
CCDC18-205ENST00000447456 NIP7Q9Y221 180 aaKnown RBP eCLIP11.64□□□□□ -0.55
CCDC18-205ENST00000447456 TUBGCP6Q96RT7 1819 aa11.64□□□□□ -0.55
CCDC18-205ENST00000447456 BCORQ6W2J9 1755 aa11.64□□□□□ -0.55
CCDC18-205ENST00000447456 C4AP0C0L4 1744 aa11.63□□□□□ -0.55
CCDC18-205ENST00000447456 NUP98P52948 1817 aa11.63□□□□□ -0.55
CCDC18-205ENST00000447456 NEURL1BA8MQ27 555 aa11.63□□□□□ -0.55
CCDC18-205ENST00000447456 ATP5J2-PTCD1G3V325 749 aa11.63□□□□□ -0.55
CCDC18-205ENST00000447456 GYS1P13807 737 aa11.63□□□□□ -0.55
CCDC18-205ENST00000447456 MVPQ14764 893 aaKnown RBP11.63□□□□□ -0.55
CCDC18-205ENST00000447456 R3HDM1Q15032 1099 aaKnown RBP11.63□□□□□ -0.55
CCDC18-205ENST00000447456 ZNF34Q8IZ26 560 aa11.63□□□□□ -0.55
CCDC18-205ENST00000447456 TMEM57Q8N5G2 664 aa11.63□□□□□ -0.55
CCDC18-205ENST00000447456 ISCA1Q9BUE6 129 aa11.63□□□□□ -0.55
CCDC18-205ENST00000447456 NYXQ9GZU5 481 aa11.63□□□□□ -0.55
CCDC18-205ENST00000447456 C9orf78Q9NZ63 289 aaPredicted RBP11.63□□□□□ -0.55
CCDC18-205ENST00000447456 DDX19BQ9UMR2 479 aa11.63□□□□□ -0.55
CCDC18-205ENST00000447456 NPHP1O15259 732 aa11.62□□□□□ -0.55
CCDC18-205ENST00000447456 IGKV5-2P06315 115 aa11.62□□□□□ -0.55
CCDC18-205ENST00000447456 GNAI3P08754 354 aa11.62□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms