RNA–Protein interactions for RNA: ENST00000447375.1

SSR4-205, Transcript of signal sequence receptor subunit 4, humanhuman

TSL 2

Gene SSR4, Length 427 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR4-205ENST00000447375 DIAPH1O60610 1272 aaKnown RBP16.69■□□□□ 0.26
SSR4-205ENST00000447375 TBC1D9BQ66K14 1250 aa16.69■□□□□ 0.26
SSR4-205ENST00000447375 PRR5LQ6MZQ0 368 aa16.69■□□□□ 0.26
SSR4-205ENST00000447375 PAXIP1Q6ZW49 1069 aaPredicted RBP16.69■□□□□ 0.26
SSR4-205ENST00000447375 CANXP27824 592 aaKnown RBP16.68■□□□□ 0.26
SSR4-205ENST00000447375 ECE1P42892 770 aa16.68■□□□□ 0.26
SSR4-205ENST00000447375 PRPF40BQ6NWY9 871 aaKnown RBP16.68■□□□□ 0.26
SSR4-205ENST00000447375 CAPNS2Q96L46 248 aa16.68■□□□□ 0.26
SSR4-205ENST00000447375 GPR101Q96P66 508 aaPredicted RBP16.68■□□□□ 0.26
SSR4-205ENST00000447375 GRM1Q13255 1194 aa16.67■□□□□ 0.26
SSR4-205ENST00000447375 SLC39A6Q13433 755 aa16.67■□□□□ 0.26
SSR4-205ENST00000447375 SULT6B1Q6IMI4 303 aa16.67■□□□□ 0.26
SSR4-205ENST00000447375 STYK1Q6J9G0 422 aa16.67■□□□□ 0.26
SSR4-205ENST00000447375 AEBP1Q8IUX7 1158 aa16.67■□□□□ 0.26
SSR4-205ENST00000447375 MCOLN1Q9GZU1 580 aa16.67■□□□□ 0.26
SSR4-205ENST00000447375 SLC52A2Q9HAB3 445 aa16.67■□□□□ 0.26
SSR4-205ENST00000447375 TSKSQ9UJT2 592 aa16.67■□□□□ 0.26
SSR4-205ENST00000447375 ZNF541Q9H0D2 1346 aa16.67■□□□□ 0.26
SSR4-205ENST00000447375 A0A087WZG4 1122 aa16.66■□□□□ 0.26
SSR4-205ENST00000447375 ZNF316A6NFI3 1004 aaPredicted RBP16.66■□□□□ 0.26
SSR4-205ENST00000447375 DDX21Q9NR30 783 aaKnown RBP eCLIP16.66■□□□□ 0.26
SSR4-205ENST00000447375 CYP4F22Q6NT55 531 aa16.65■□□□□ 0.26
SSR4-205ENST00000447375 MASTLQ96GX5 879 aa16.65■□□□□ 0.26
SSR4-205ENST00000447375 CFAP53Q96M91 514 aa16.65■□□□□ 0.26
SSR4-205ENST00000447375 LGR6Q9HBX8 967 aa16.65■□□□□ 0.26
SSR4-205ENST00000447375 ANKRD31Q8N7Z5 1873 aa16.65■□□□□ 0.26
SSR4-205ENST00000447375 NPHP1O15259 732 aa16.64■□□□□ 0.25
SSR4-205ENST00000447375 SRGNP10124 158 aa16.64■□□□□ 0.25
SSR4-205ENST00000447375 EIF5P55010 431 aaKnown RBP16.64■□□□□ 0.25
SSR4-205ENST00000447375 RALBP1Q15311 655 aa16.64■□□□□ 0.25
SSR4-205ENST00000447375 VSIG10Q8N0Z9 540 aa16.64■□□□□ 0.25
SSR4-205ENST00000447375 COL3A1P02461 1466 aaPredicted RBP16.64■□□□□ 0.25
SSR4-205ENST00000447375 RNF123Q5XPI4 1314 aa16.64■□□□□ 0.25
SSR4-205ENST00000447375 CCDC93Q567U6 631 aa16.63■□□□□ 0.25
SSR4-205ENST00000447375 AKAP4Q5JQC9 854 aa16.63■□□□□ 0.25
SSR4-205ENST00000447375 ZNF277Q9NRM2 450 aaPredicted RBP16.63■□□□□ 0.25
SSR4-205ENST00000447375 ADAMTSL1Q8N6G6 1762 aa16.63■□□□□ 0.25
SSR4-205ENST00000447375 SLX4Q8IY92 1834 aa16.63■□□□□ 0.25
SSR4-205ENST00000447375 COL11A2P13942 1736 aaPredicted RBP16.62■□□□□ 0.25
SSR4-205ENST00000447375 ST5P78524 1137 aa16.62■□□□□ 0.25
SSR4-205ENST00000447375 FKBP4Q02790 459 aaKnown RBP eCLIP16.62■□□□□ 0.25
SSR4-205ENST00000447375 CNBD1Q8NA66 436 aa16.62■□□□□ 0.25
SSR4-205ENST00000447375 C7orf43Q8WVR3 580 aa16.62■□□□□ 0.25
SSR4-205ENST00000447375 SETDB2Q96T68 719 aa16.62■□□□□ 0.25
SSR4-205ENST00000447375 STARD3NLO95772 234 aa16.61■□□□□ 0.25
SSR4-205ENST00000447375 HMOX1P09601 288 aa16.61■□□□□ 0.25
SSR4-205ENST00000447375 MAP2K2P36507 400 aa16.61■□□□□ 0.25
SSR4-205ENST00000447375 FMR1Q06787 632 aaKnown RBP eCLIP16.61■□□□□ 0.25
SSR4-205ENST00000447375 TBC1D2BQ9UPU7 963 aa16.61■□□□□ 0.25
SSR4-205ENST00000447375 TNRC18O15417 2968 aaPredicted RBP16.6■□□□□ 0.25
SSR4-205ENST00000447375 FZD9O00144 591 aa16.6■□□□□ 0.25
SSR4-205ENST00000447375 U2SURPO15042 1029 aaKnown RBP16.6■□□□□ 0.25
SSR4-205ENST00000447375 RNMTO43148 476 aaKnown RBP16.6■□□□□ 0.25
SSR4-205ENST00000447375 CA12O43570 354 aa16.6■□□□□ 0.25
SSR4-205ENST00000447375 AOC2O75106 756 aa16.6■□□□□ 0.25
SSR4-205ENST00000447375 DGKZQ13574 1117 aa16.6■□□□□ 0.25
SSR4-205ENST00000447375 GPC2Q8N158 579 aa16.6■□□□□ 0.25
SSR4-205ENST00000447375 ZNF330Q9Y3S2 320 aaPredicted RBP16.6■□□□□ 0.25
SSR4-205ENST00000447375 THSD7BQ9C0I4 1608 aa16.59■□□□□ 0.25
SSR4-205ENST00000447375 CST9Q5W186 159 aa16.59■□□□□ 0.25
SSR4-205ENST00000447375 NUDCQ9Y266 331 aa16.59■□□□□ 0.25
SSR4-205ENST00000447375 TLL2Q9Y6L7 1015 aa16.59■□□□□ 0.25
SSR4-205ENST00000447375 RTKN2Q8IZC4 609 aa16.58■□□□□ 0.24
SSR4-205ENST00000447375 IARSP41252 1262 aaKnown RBP16.57■□□□□ 0.24
SSR4-205ENST00000447375 UBR2Q8IWV8 1755 aa16.56■□□□□ 0.24
SSR4-205ENST00000447375 NPR1P16066 1061 aa16.56■□□□□ 0.24
SSR4-205ENST00000447375 LMOD1P29536 600 aaPredicted RBP16.56■□□□□ 0.24
SSR4-205ENST00000447375 OLFM4Q6UX06 510 aa16.56■□□□□ 0.24
SSR4-205ENST00000447375 SYNE4Q8N205 404 aa16.56■□□□□ 0.24
SSR4-205ENST00000447375 GJA3Q9Y6H8 435 aa16.56■□□□□ 0.24
SSR4-205ENST00000447375 MYBBP1AQ9BQG0 1328 aaKnown RBP16.55■□□□□ 0.24
SSR4-205ENST00000447375 TRAF5O00463 557 aa16.55■□□□□ 0.24
SSR4-205ENST00000447375 IL6STP40189 918 aaPredicted RBP16.55■□□□□ 0.24
SSR4-205ENST00000447375 NPM2Q86SE8 214 aaKnown RBP16.55■□□□□ 0.24
SSR4-205ENST00000447375 TTC5Q8N0Z6 440 aa16.55■□□□□ 0.24
SSR4-205ENST00000447375 JDP2Q8WYK2 163 aa16.55■□□□□ 0.24
SSR4-205ENST00000447375 PRKRIP1Q9H875 184 aaPredicted RBP16.55■□□□□ 0.24
SSR4-205ENST00000447375 CACNA1SQ13698 1873 aa16.54■□□□□ 0.24
SSR4-205ENST00000447375 SIPA1L3O60292 1781 aaPredicted RBP16.54■□□□□ 0.24
SSR4-205ENST00000447375 U2AF1L5P0DN76 240 aaPredicted RBP16.54■□□□□ 0.24
SSR4-205ENST00000447375 EIF6P56537 245 aaKnown RBP16.54■□□□□ 0.24
SSR4-205ENST00000447375 U2AF1Q01081 240 aaKnown RBP eCLIP16.54■□□□□ 0.24
SSR4-205ENST00000447375 RSPH6AQ9H0K4 717 aa16.54■□□□□ 0.24
SSR4-205ENST00000447375 MRC1P22897 1456 aa16.54■□□□□ 0.24
SSR4-205ENST00000447375 ARFGEF2Q9Y6D5 1785 aa16.54■□□□□ 0.24
SSR4-205ENST00000447375 LTBP1Q14766 1721 aa16.53■□□□□ 0.24
SSR4-205ENST00000447375 CAMTA2O94983 1202 aa16.53■□□□□ 0.24
SSR4-205ENST00000447375 EPS15P42566 896 aa16.53■□□□□ 0.24
SSR4-205ENST00000447375 BRPF1P55201 1214 aaPredicted RBP16.53■□□□□ 0.24
SSR4-205ENST00000447375 MTHFSDQ2M296 383 aaKnown RBP16.53■□□□□ 0.24
SSR4-205ENST00000447375 PRPF38BQ5VTL8 546 aaKnown RBP16.53■□□□□ 0.24
SSR4-205ENST00000447375 NBPF5PQ86XG9 351 aaPredicted RBP16.53■□□□□ 0.24
SSR4-205ENST00000447375 TEX13AQ9BXU3 409 aaPredicted RBP16.53■□□□□ 0.24
SSR4-205ENST00000447375 SOX10P56693 466 aa16.52■□□□□ 0.24
SSR4-205ENST00000447375 USP50Q70EL3 339 aaPredicted RBP16.52■□□□□ 0.24
SSR4-205ENST00000447375 SAPCD2Q86UD0 394 aa16.52■□□□□ 0.24
SSR4-205ENST00000447375 CASP8AP2Q9UKL3 1982 aa16.51■□□□□ 0.23
SSR4-205ENST00000447375 SCN7AQ01118 1682 aa16.51■□□□□ 0.23
SSR4-205ENST00000447375 KLRG2A4D1S0 409 aaPredicted RBP16.51■□□□□ 0.23
SSR4-205ENST00000447375 PRKAR2BP31323 418 aa16.51■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms