RNA–Protein interactions for RNA: ENST00000447310.5

ZNF550-204, Transcript of zinc finger protein 550, humanhuman

TSL 1 (best)

Gene ZNF550, Length 4,305 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF550-204ENST00000447310 MAP3K2Q9Y2U5 619 aa13.19□□□□□ -0.3
ZNF550-204ENST00000447310 RTL1A6NKG5 1358 aa13.18□□□□□ -0.3
ZNF550-204ENST00000447310 TSR1Q2NL82 804 aaKnown RBP13.18□□□□□ -0.3
ZNF550-204ENST00000447310 FKBP4Q02790 459 aaKnown RBP eCLIP13.18□□□□□ -0.3
ZNF550-204ENST00000447310 PHAXQ9H814 394 aaKnown RBP13.18□□□□□ -0.3
ZNF550-204ENST00000447310 TRPM2O94759 1503 aa13.18□□□□□ -0.3
ZNF550-204ENST00000447310 CEP135Q66GS9 1140 aa13.17□□□□□ -0.3
ZNF550-204ENST00000447310 FSIP1Q8NA03 581 aa13.17□□□□□ -0.3
ZNF550-204ENST00000447310 LRRC2Q9BYS8 371 aa13.17□□□□□ -0.3
ZNF550-204ENST00000447310 NOL12Q9UGY1 213 aaKnown RBP eCLIP13.17□□□□□ -0.3
ZNF550-204ENST00000447310 NSFL1CQ9UNZ2 370 aaKnown RBP13.17□□□□□ -0.3
ZNF550-204ENST00000447310 V9GYY5 206 aaPredicted RBP13.17□□□□□ -0.3
ZNF550-204ENST00000447310 CCP110O43303 1012 aa13.17□□□□□ -0.3
ZNF550-204ENST00000447310 SNX14Q9Y5W7 946 aa13.17□□□□□ -0.3
ZNF550-204ENST00000447310 BIN1O00499 593 aa13.17□□□□□ -0.3
ZNF550-204ENST00000447310 BRPF1P55201 1214 aaPredicted RBP13.17□□□□□ -0.3
ZNF550-204ENST00000447310 CFAP100Q494V2 611 aa13.17□□□□□ -0.3
ZNF550-204ENST00000447310 KIF2CQ99661 725 aa13.17□□□□□ -0.3
ZNF550-204ENST00000447310 IBTKQ9P2D0 1353 aaPredicted RBP13.16□□□□□ -0.3
ZNF550-204ENST00000447310 SKILP12757 684 aa13.16□□□□□ -0.3
ZNF550-204ENST00000447310 CCAR1Q8IX12 1150 aaKnown RBP13.16□□□□□ -0.3
ZNF550-204ENST00000447310 BRF1Q92994 677 aa13.16□□□□□ -0.3
ZNF550-204ENST00000447310 NEK1Q96PY6 1258 aa13.16□□□□□ -0.3
ZNF550-204ENST00000447310 CTAGE5O15320 804 aa13.16□□□□□ -0.3
ZNF550-204ENST00000447310 SGSM2O43147 1006 aa13.16□□□□□ -0.3
ZNF550-204ENST00000447310 JMYQ8N9B5 988 aa13.16□□□□□ -0.3
ZNF550-204ENST00000447310 EYA1Q99502 592 aa13.16□□□□□ -0.3
ZNF550-204ENST00000447310 PAXBP1Q9Y5B6 917 aa13.16□□□□□ -0.3
ZNF550-204ENST00000447310 RIOK3O14730 519 aaKnown RBP13.15□□□□□ -0.3
ZNF550-204ENST00000447310 NPHP3Q7Z494 1330 aa13.15□□□□□ -0.3
ZNF550-204ENST00000447310 KIF2AO00139 706 aaPredicted RBP13.15□□□□□ -0.3
ZNF550-204ENST00000447310 STX1AQ16623 288 aa13.15□□□□□ -0.3
ZNF550-204ENST00000447310 SMAP1Q8IYB5 467 aaPredicted RBP13.15□□□□□ -0.3
ZNF550-204ENST00000447310 NEMFO60524 1076 aa13.15□□□□□ -0.3
ZNF550-204ENST00000447310 URI1O94763 535 aaPredicted RBP13.15□□□□□ -0.3
ZNF550-204ENST00000447310 HSP90B2PQ58FF3 399 aa13.15□□□□□ -0.3
ZNF550-204ENST00000447310 VPS53Q5VIR6 699 aa13.15□□□□□ -0.3
ZNF550-204ENST00000447310 JARID2Q92833 1246 aaPredicted RBP13.15□□□□□ -0.3
ZNF550-204ENST00000447310 AMOTL2Q9Y2J4 779 aa13.15□□□□□ -0.3
ZNF550-204ENST00000447310 MAPK8IP2Q13387 824 aaPredicted RBP13.15□□□□□ -0.31
ZNF550-204ENST00000447310 LARP1Q6PKG0 1096 aaKnown RBP13.15□□□□□ -0.31
ZNF550-204ENST00000447310 MYD88Q99836 296 aa13.15□□□□□ -0.31
ZNF550-204ENST00000447310 HSPA4P34932 840 aa13.14□□□□□ -0.31
ZNF550-204ENST00000447310 CREB3L3Q68CJ9 461 aa13.14□□□□□ -0.31
ZNF550-204ENST00000447310 CLASP1Q7Z460 1538 aa13.14□□□□□ -0.31
ZNF550-204ENST00000447310 NMIQ13287 307 aaPredicted RBP13.14□□□□□ -0.31
ZNF550-204ENST00000447310 ANKRD20A12PQ8NF67 263 aa13.14□□□□□ -0.31
ZNF550-204ENST00000447310 ADCY10Q96PN6 1610 aa13.14□□□□□ -0.31
ZNF550-204ENST00000447310 TMCO3Q6UWJ1 677 aa13.14□□□□□ -0.31
ZNF550-204ENST00000447310 TMC6Q7Z403 805 aa13.14□□□□□ -0.31
ZNF550-204ENST00000447310 MAP3K19Q56UN5 1328 aa13.13□□□□□ -0.31
ZNF550-204ENST00000447310 RAD50Q92878 1312 aa13.13□□□□□ -0.31
ZNF550-204ENST00000447310 PREX2Q70Z35 1606 aa13.13□□□□□ -0.31
ZNF550-204ENST00000447310 SMTNL1A8MU46 457 aa13.13□□□□□ -0.31
ZNF550-204ENST00000447310 CAVIN2O95810 425 aa13.13□□□□□ -0.31
ZNF550-204ENST00000447310 CCDC158Q5M9N0 1113 aa13.13□□□□□ -0.31
ZNF550-204ENST00000447310 ISM2Q6H9L7 571 aa13.13□□□□□ -0.31
ZNF550-204ENST00000447310 U3KPZ7 1027 aaPredicted RBP13.13□□□□□ -0.31
ZNF550-204ENST00000447310 IPO7O95373 1038 aaKnown RBP13.13□□□□□ -0.31
ZNF550-204ENST00000447310 RUFY3Q7L099 469 aa13.13□□□□□ -0.31
ZNF550-204ENST00000447310 ERICH2A1L162 156 aa13.13□□□□□ -0.31
ZNF550-204ENST00000447310 C8orf76Q96K31 380 aa13.13□□□□□ -0.31
ZNF550-204ENST00000447310 KIF24Q5T7B8 1368 aa13.13□□□□□ -0.31
ZNF550-204ENST00000447310 MYOM2P54296 1465 aa13.13□□□□□ -0.31
ZNF550-204ENST00000447310 POLR3DP05423 398 aaPredicted RBP13.12□□□□□ -0.31
ZNF550-204ENST00000447310 U2AF2P26368 475 aaKnown RBP eCLIP13.12□□□□□ -0.31
ZNF550-204ENST00000447310 DHX8Q14562 1220 aaKnown RBP13.12□□□□□ -0.31
ZNF550-204ENST00000447310 TTC39AQ5SRH9 613 aa13.12□□□□□ -0.31
ZNF550-204ENST00000447310 TRERF1Q96PN7 1200 aa13.12□□□□□ -0.31
ZNF550-204ENST00000447310 CROCC2H7BZ55 1655 aa13.12□□□□□ -0.31
ZNF550-204ENST00000447310 SNW1Q13573 536 aaKnown RBP13.12□□□□□ -0.31
ZNF550-204ENST00000447310 RRP12Q5JTH9 1297 aaKnown RBP13.12□□□□□ -0.31
ZNF550-204ENST00000447310 UNC5CLQ8IV45 518 aa13.12□□□□□ -0.31
ZNF550-204ENST00000447310 CCDC85AQ96PX6 553 aaPredicted RBP13.12□□□□□ -0.31
ZNF550-204ENST00000447310 DDX46Q7L014 1031 aaKnown RBP13.12□□□□□ -0.31
ZNF550-204ENST00000447310 PCMTD1Q96MG8 357 aaPredicted RBP13.12□□□□□ -0.31
ZNF550-204ENST00000447310 HMG20BQ9P0W2 317 aa13.12□□□□□ -0.31
ZNF550-204ENST00000447310 IQGAP3Q86VI3 1631 aa13.12□□□□□ -0.31
ZNF550-204ENST00000447310 TTC41PQ6P2S7 1318 aa13.12□□□□□ -0.31
ZNF550-204ENST00000447310 PLXNC1O60486 1568 aa13.12□□□□□ -0.31
ZNF550-204ENST00000447310 CBFA2T2O43439 604 aa13.12□□□□□ -0.31
ZNF550-204ENST00000447310 ZNF853P0CG23 659 aa13.12□□□□□ -0.31
ZNF550-204ENST00000447310 CWF19L2Q2TBE0 894 aaKnown RBP13.12□□□□□ -0.31
ZNF550-204ENST00000447310 ZSCAN16Q9H4T2 348 aaPredicted RBP13.12□□□□□ -0.31
ZNF550-204ENST00000447310 CEP126Q9P2H0 1117 aa13.12□□□□□ -0.31
ZNF550-204ENST00000447310 MYO5CQ9NQX4 1742 aa13.12□□□□□ -0.31
ZNF550-204ENST00000447310 POLR3GO15318 223 aaPredicted RBP13.11□□□□□ -0.31
ZNF550-204ENST00000447310 GSDMDP57764 484 aa13.11□□□□□ -0.31
ZNF550-204ENST00000447310 RBM33Q96EV2 1170 aaKnown RBP13.11□□□□□ -0.31
ZNF550-204ENST00000447310 SLC3A2P08195 630 aaKnown RBP13.11□□□□□ -0.31
ZNF550-204ENST00000447310 NBPF7P0C2Y1 421 aaPredicted RBP13.11□□□□□ -0.31
ZNF550-204ENST00000447310 BCL2L12Q9HB09 334 aa13.11□□□□□ -0.31
ZNF550-204ENST00000447310 HYPKQ9NX55 129 aa13.11□□□□□ -0.31
ZNF550-204ENST00000447310 CTNNA3Q9UI47 895 aa13.11□□□□□ -0.31
ZNF550-204ENST00000447310 CCDC171Q6TFL3 1326 aa13.11□□□□□ -0.31
ZNF550-204ENST00000447310 HMGB1P09429 215 aaKnown RBP13.11□□□□□ -0.31
ZNF550-204ENST00000447310 EDC4Q6P2E9 1401 aaKnown RBP13.11□□□□□ -0.31
ZNF550-204ENST00000447310 TATP17735 454 aaPredicted RBP13.1□□□□□ -0.31
ZNF550-204ENST00000447310 Q6ZUG5 572 aa13.1□□□□□ -0.31
ZNF550-204ENST00000447310 RAB11FIP4Q86YS3 637 aa13.1□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms