RNA–Protein interactions for RNA: ENST00000446488.7

NFRKB-201, Transcript of nuclear factor related to kappaB binding protein, humanhuman

APPRIS P1 TSL 5 BASIC

Gene NFRKB, Length 5,093 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NFRKB-201ENST00000446488 CCDC196A0A1B0GTZ2 297 aa12.9□□□□□ -0.34
NFRKB-201ENST00000446488 CCDC112Q8NEF3 446 aa12.9□□□□□ -0.34
NFRKB-201ENST00000446488 MAGI2Q86UL8 1455 aa12.9□□□□□ -0.34
NFRKB-201ENST00000446488 TRAF1Q13077 416 aa12.9□□□□□ -0.34
NFRKB-201ENST00000446488 CNBD1Q8NA66 436 aa12.9□□□□□ -0.34
NFRKB-201ENST00000446488 CTCFLQ8NI51 663 aaPredicted RBP12.9□□□□□ -0.34
NFRKB-201ENST00000446488 PDCL3Q9H2J4 239 aa12.9□□□□□ -0.34
NFRKB-201ENST00000446488 QTRT2Q9H974 415 aaKnown RBP12.9□□□□□ -0.34
NFRKB-201ENST00000446488 FIBPO43427 364 aa12.89□□□□□ -0.35
NFRKB-201ENST00000446488 MAP4K4O95819 1239 aaPredicted RBP12.89□□□□□ -0.35
NFRKB-201ENST00000446488 STK38Q15208 465 aa12.89□□□□□ -0.35
NFRKB-201ENST00000446488 AEBP1Q8IUX7 1158 aa12.89□□□□□ -0.35
NFRKB-201ENST00000446488 UTP3Q9NQZ2 479 aaKnown RBP eCLIP12.89□□□□□ -0.353e-6■■■■■ 80.4
NFRKB-201ENST00000446488 SLC39A6Q13433 755 aa12.89□□□□□ -0.35
NFRKB-201ENST00000446488 GPR162Q16538 588 aa12.89□□□□□ -0.35
NFRKB-201ENST00000446488 XAGE3Q8WTP9 111 aa12.89□□□□□ -0.35
NFRKB-201ENST00000446488 ANKRD2Q9GZV1 360 aa12.89□□□□□ -0.35
NFRKB-201ENST00000446488 PDE4BQ07343 736 aa12.89□□□□□ -0.35
NFRKB-201ENST00000446488 TAF3Q5VWG9 929 aa12.89□□□□□ -0.35
NFRKB-201ENST00000446488 PI4KAP2A4QPH2 592 aa12.89□□□□□ -0.35
NFRKB-201ENST00000446488 KINO60870 393 aaKnown RBP12.89□□□□□ -0.35
NFRKB-201ENST00000446488 TNNI2P48788 182 aa12.89□□□□□ -0.35
NFRKB-201ENST00000446488 SYCP1Q15431 976 aa12.89□□□□□ -0.35
NFRKB-201ENST00000446488 PI4KAP1Q8N8J0 262 aa12.89□□□□□ -0.35
NFRKB-201ENST00000446488 NFATC2IPQ8NCF5 419 aa12.89□□□□□ -0.35
NFRKB-201ENST00000446488 RUFY1Q96T51 708 aa12.89□□□□□ -0.35
NFRKB-201ENST00000446488 YEATS2Q9ULM3 1422 aa12.88□□□□□ -0.35
NFRKB-201ENST00000446488 EIF4A2Q14240 407 aaKnown RBP12.88□□□□□ -0.35
NFRKB-201ENST00000446488 CRNKL1Q9BZJ0 848 aaKnown RBP12.88□□□□□ -0.35
NFRKB-201ENST00000446488 ZHX3Q9H4I2 956 aa12.88□□□□□ -0.35
NFRKB-201ENST00000446488 EXOC6BQ9Y2D4 811 aa12.88□□□□□ -0.35
NFRKB-201ENST00000446488 HOXC9P31274 260 aa12.88□□□□□ -0.35
NFRKB-201ENST00000446488 CHMP4BP1P59074 171 aa12.88□□□□□ -0.35
NFRKB-201ENST00000446488 COPS6Q7L5N1 327 aa12.88□□□□□ -0.35
NFRKB-201ENST00000446488 SPC24Q8NBT2 197 aa12.88□□□□□ -0.35
NFRKB-201ENST00000446488 IL16Q14005 1332 aa12.88□□□□□ -0.35
NFRKB-201ENST00000446488 NPHP4O75161 1426 aaPredicted RBP12.88□□□□□ -0.35
NFRKB-201ENST00000446488 RANBP6O60518 1105 aaKnown RBP12.88□□□□□ -0.35
NFRKB-201ENST00000446488 EIF6P56537 245 aaKnown RBP12.88□□□□□ -0.35
NFRKB-201ENST00000446488 CWC27Q6UX04 472 aaKnown RBP12.88□□□□□ -0.35
NFRKB-201ENST00000446488 H0YIN7 160 aa12.87□□□□□ -0.35
NFRKB-201ENST00000446488 ZFYVE27Q5T4F4 411 aa12.87□□□□□ -0.35
NFRKB-201ENST00000446488 NUTM1Q86Y26 1132 aa12.87□□□□□ -0.35
NFRKB-201ENST00000446488 PDCL2Q8N4E4 241 aa12.87□□□□□ -0.35
NFRKB-201ENST00000446488 TMEM57Q8N5G2 664 aa12.87□□□□□ -0.35
NFRKB-201ENST00000446488 MAGEC2Q9UBF1 373 aaPredicted RBP12.87□□□□□ -0.35
NFRKB-201ENST00000446488 STIM1Q13586 685 aa12.87□□□□□ -0.35
NFRKB-201ENST00000446488 PARP10Q53GL7 1025 aa12.87□□□□□ -0.35
NFRKB-201ENST00000446488 NSFL1CQ9UNZ2 370 aaKnown RBP12.87□□□□□ -0.35
NFRKB-201ENST00000446488 TMEM94Q12767 1356 aa12.87□□□□□ -0.35
NFRKB-201ENST00000446488 F6X3S4 739 aa12.87□□□□□ -0.35
NFRKB-201ENST00000446488 RDXP35241 583 aaKnown RBP12.87□□□□□ -0.35
NFRKB-201ENST00000446488 SUPT20HQ8NEM7 779 aa12.87□□□□□ -0.35
NFRKB-201ENST00000446488 LRRFIP2Q9Y608 721 aaKnown RBP12.87□□□□□ -0.35
NFRKB-201ENST00000446488 ABCA5Q8WWZ7 1642 aa12.87□□□□□ -0.35
NFRKB-201ENST00000446488 PDE6BP35913 854 aa12.87□□□□□ -0.35
NFRKB-201ENST00000446488 BOLA2Q9H3K6 86 aa12.87□□□□□ -0.35
NFRKB-201ENST00000446488 PIK3C2GO75747 1445 aa12.86□□□□□ -0.35
NFRKB-201ENST00000446488 B4DLN1 442 aa12.86□□□□□ -0.35
NFRKB-201ENST00000446488 MRPL12P52815 198 aaKnown RBP12.86□□□□□ -0.35
NFRKB-201ENST00000446488 MX1P20591 662 aa12.86□□□□□ -0.35
NFRKB-201ENST00000446488 CDR1P51861 262 aa12.86□□□□□ -0.35
NFRKB-201ENST00000446488 ALDH1L1O75891 902 aa12.86□□□□□ -0.35
NFRKB-201ENST00000446488 MATR3P43243 847 aaKnown RBP eCLIP12.86□□□□□ -0.35
NFRKB-201ENST00000446488 ZSCAN31Q96LW9 406 aaPredicted RBP12.86□□□□□ -0.35
NFRKB-201ENST00000446488 SSH1Q8WYL5 1049 aa12.86□□□□□ -0.35
NFRKB-201ENST00000446488 TBC1D2Q9BYX2 928 aa12.86□□□□□ -0.35
NFRKB-201ENST00000446488 WWC3Q9ULE0 1092 aa12.86□□□□□ -0.35
NFRKB-201ENST00000446488 RALGAPBQ86X10 1494 aa12.85□□□□□ -0.35
NFRKB-201ENST00000446488 LEKR1Q6ZMV7 388 aa12.85□□□□□ -0.35
NFRKB-201ENST00000446488 MAPKBP1O60336 1514 aa12.85□□□□□ -0.35
NFRKB-201ENST00000446488 SMC2O95347 1197 aa12.85□□□□□ -0.35
NFRKB-201ENST00000446488 PLCG2P16885 1265 aa12.85□□□□□ -0.35
NFRKB-201ENST00000446488 VEZTQ9HBM0 779 aa12.85□□□□□ -0.35
NFRKB-201ENST00000446488 IBSPP21815 317 aaPredicted RBP12.85□□□□□ -0.35
NFRKB-201ENST00000446488 CCDC178Q5BJE1 867 aa12.85□□□□□ -0.35
NFRKB-201ENST00000446488 PODXL2Q9NZ53 605 aa12.85□□□□□ -0.35
NFRKB-201ENST00000446488 ZNF213O14771 459 aa12.85□□□□□ -0.35
NFRKB-201ENST00000446488 SSBP05455 408 aaKnown RBP eCLIP12.85□□□□□ -0.35
NFRKB-201ENST00000446488 C20orf194Q5TEA3 1177 aa12.85□□□□□ -0.35
NFRKB-201ENST00000446488 TNMDQ9H2S6 317 aa12.85□□□□□ -0.35
NFRKB-201ENST00000446488 NKTRP30414 1462 aaKnown RBP12.85□□□□□ -0.35
NFRKB-201ENST00000446488 TCOF1Q13428 1488 aaKnown RBP12.84□□□□□ -0.35
NFRKB-201ENST00000446488 MAP3K5Q99683 1374 aa12.84□□□□□ -0.35
NFRKB-201ENST00000446488 DISP3Q9P2K9 1392 aa12.84□□□□□ -0.35
NFRKB-201ENST00000446488 KRT85P78386 507 aa12.84□□□□□ -0.35
NFRKB-201ENST00000446488 RBM26Q5T8P6 1007 aaKnown RBP12.84□□□□□ -0.35
NFRKB-201ENST00000446488 PDILTQ8N807 584 aa12.84□□□□□ -0.35
NFRKB-201ENST00000446488 PDIA4P13667 645 aaKnown RBP12.84□□□□□ -0.35
NFRKB-201ENST00000446488 KSR2Q6VAB6 950 aa12.84□□□□□ -0.35
NFRKB-201ENST00000446488 CCDC8Q9H0W5 538 aaPredicted RBP12.84□□□□□ -0.35
NFRKB-201ENST00000446488 MBIPQ9NS73 344 aa12.84□□□□□ -0.35
NFRKB-201ENST00000446488 GJA3Q9Y6H8 435 aa12.84□□□□□ -0.35
NFRKB-201ENST00000446488 CCDC12Q8WUD4 166 aaPredicted RBP12.84□□□□□ -0.35
NFRKB-201ENST00000446488 HOOK2Q96ED9 719 aa12.84□□□□□ -0.35
NFRKB-201ENST00000446488 CHPF2Q9P2E5 772 aa12.84□□□□□ -0.35
NFRKB-201ENST00000446488 SPDYE4A6NLX3 237 aa12.84□□□□□ -0.35
NFRKB-201ENST00000446488 ZFYVE9O95405 1425 aa12.83□□□□□ -0.36
NFRKB-201ENST00000446488 HMGB1P09429 215 aaKnown RBP12.83□□□□□ -0.36
NFRKB-201ENST00000446488 DESP17661 470 aa12.83□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms