RNA–Protein interactions for RNA: ENST00000445866.6

SGCE-206, Transcript of sarcoglycan epsilon, humanhuman

TSL 5 BASIC

Gene SGCE, Length 1,666 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCE-206ENST00000445866 MAP3K15Q6ZN16 1313 aa22.11■■□□□ 1.13
SGCE-206ENST00000445866 ERVV-1B6SEH8 477 aa22.11■■□□□ 1.13
SGCE-206ENST00000445866 MS4A1P11836 297 aa22.11■■□□□ 1.13
SGCE-206ENST00000445866 DNAAF4Q8WXU2 420 aa22.11■■□□□ 1.13
SGCE-206ENST00000445866 TNNQ9UQP3 1299 aa22.11■■□□□ 1.13
SGCE-206ENST00000445866 FTSJ3Q8IY81 847 aaKnown RBP22.11■■□□□ 1.13
SGCE-206ENST00000445866 DZIP1LQ8IYY4 767 aaKnown RBP22.11■■□□□ 1.13
SGCE-206ENST00000445866 NARFQ9UHQ1 456 aa22.11■■□□□ 1.13
SGCE-206ENST00000445866 CAMTA2O94983 1202 aa22.1■■□□□ 1.13
SGCE-206ENST00000445866 HLFQ16534 295 aa22.1■■□□□ 1.13
SGCE-206ENST00000445866 COL23A1Q86Y22 540 aaPredicted RBP22.1■■□□□ 1.13
SGCE-206ENST00000445866 SRP68Q9UHB9 627 aaKnown RBP22.1■■□□□ 1.13
SGCE-206ENST00000445866 TNS1Q9HBL0 1735 aaKnown RBP22.09■■□□□ 1.13
SGCE-206ENST00000445866 RNF123Q5XPI4 1314 aa22.09■■□□□ 1.13
SGCE-206ENST00000445866 USPL1Q5W0Q7 1092 aa22.09■■□□□ 1.13
SGCE-206ENST00000445866 PANK1Q8TE04 598 aa22.08■■□□□ 1.13
SGCE-206ENST00000445866 METTL22Q9BUU2 404 aaPredicted RBP22.08■■□□□ 1.13
SGCE-206ENST00000445866 PDE3AQ14432 1141 aa22.07■■□□□ 1.12
SGCE-206ENST00000445866 C20orf194Q5TEA3 1177 aa22.07■■□□□ 1.12
SGCE-206ENST00000445866 GIGYF2Q6Y7W6 1299 aaKnown RBP22.07■■□□□ 1.12
SGCE-206ENST00000445866 MYD88Q99836 296 aa22.07■■□□□ 1.12
SGCE-206ENST00000445866 LY75O60449 1722 aa22.07■■□□□ 1.12
SGCE-206ENST00000445866 TJP1Q07157 1748 aa22.07■■□□□ 1.12
SGCE-206ENST00000445866 ADCY9O60503 1353 aa22.07■■□□□ 1.12
SGCE-206ENST00000445866 C5P01031 1676 aa22.07■■□□□ 1.12
SGCE-206ENST00000445866 PNPLA7Q6ZV29 1317 aa22.07■■□□□ 1.12
SGCE-206ENST00000445866 NEXNQ0ZGT2 675 aa22.07■■□□□ 1.12
SGCE-206ENST00000445866 ZNF652Q9Y2D9 606 aa22.07■■□□□ 1.12
SGCE-206ENST00000445866 RLBP1P12271 317 aa22.06■■□□□ 1.12
SGCE-206ENST00000445866 TCIRG1Q13488 830 aa22.06■■□□□ 1.12
SGCE-206ENST00000445866 CLEC4GQ6UXB4 293 aa22.06■■□□□ 1.12
SGCE-206ENST00000445866 ZNF831Q5JPB2 1677 aa22.06■■□□□ 1.12
SGCE-206ENST00000445866 ATP5J2-PTCD1G3V325 749 aa22.05■■□□□ 1.12
SGCE-206ENST00000445866 HSP90AB3PQ58FF7 597 aa22.04■■□□□ 1.12
SGCE-206ENST00000445866 BEND3Q5T5X7 828 aa22.04■■□□□ 1.12
SGCE-206ENST00000445866 TMEM57Q8N5G2 664 aa22.04■■□□□ 1.12
SGCE-206ENST00000445866 USP42Q9H9J4 1324 aaKnown RBP22.04■■□□□ 1.12
SGCE-206ENST00000445866 CCT4P50991 539 aaKnown RBP22.04■■□□□ 1.12
SGCE-206ENST00000445866 R3HDM1Q15032 1099 aaKnown RBP22.04■■□□□ 1.12
SGCE-206ENST00000445866 SRCIN1Q9C0H9 1055 aa22.04■■□□□ 1.12
SGCE-206ENST00000445866 BCL2L12Q9HB09 334 aa22.04■■□□□ 1.12
SGCE-206ENST00000445866 GPTP24298 496 aa22.03■■□□□ 1.12
SGCE-206ENST00000445866 INTS3Q68E01 1043 aaKnown RBP22.03■■□□□ 1.12
SGCE-206ENST00000445866 LINS1Q8NG48 757 aa22.03■■□□□ 1.12
SGCE-206ENST00000445866 C4BP0C0L5 1744 aa22.03■■□□□ 1.12
SGCE-206ENST00000445866 ABCC4O15439 1325 aa22.03■■□□□ 1.12
SGCE-206ENST00000445866 GYS1P13807 737 aa22.02■■□□□ 1.12
SGCE-206ENST00000445866 FKBP8Q14318 412 aa22.02■■□□□ 1.12
SGCE-206ENST00000445866 BICDL1Q6ZP65 573 aa22.02■■□□□ 1.12
SGCE-206ENST00000445866 COG6Q9Y2V7 657 aa22.02■■□□□ 1.12
SGCE-206ENST00000445866 SOCS7O14512 581 aa22.01■■□□□ 1.11
SGCE-206ENST00000445866 RGL2O15211 777 aa22.01■■□□□ 1.11
SGCE-206ENST00000445866 IGKV5-2P06315 115 aa22.01■■□□□ 1.11
SGCE-206ENST00000445866 IRX6P78412 446 aaPredicted RBP22.01■■□□□ 1.11
SGCE-206ENST00000445866 CWF19L2Q2TBE0 894 aaKnown RBP22.01■■□□□ 1.11
SGCE-206ENST00000445866 ITPRIPQ8IWB1 547 aa22.01■■□□□ 1.11
SGCE-206ENST00000445866 NIP7Q9Y221 180 aaKnown RBP eCLIP22.01■■□□□ 1.11
SGCE-206ENST00000445866 CICQ96RK0 1608 aaPredicted RBP22.01■■□□□ 1.11
SGCE-206ENST00000445866 ZNF34Q8IZ26 560 aa22.01■■□□□ 1.11
SGCE-206ENST00000445866 NLGN1Q8N2Q7 840 aa22.01■■□□□ 1.11
SGCE-206ENST00000445866 ISCA1Q9BUE6 129 aa22.01■■□□□ 1.11
SGCE-206ENST00000445866 PDGFDQ9GZP0 370 aaPredicted RBP22.01■■□□□ 1.11
SGCE-206ENST00000445866 TRIM28Q13263 835 aaKnown RBP22■■□□□ 1.11
SGCE-206ENST00000445866 TBC1D9BQ66K14 1250 aa22■■□□□ 1.11
SGCE-206ENST00000445866 SETDB2Q96T68 719 aa22■■□□□ 1.11
SGCE-206ENST00000445866 NEURL1BA8MQ27 555 aa21.99■■□□□ 1.11
SGCE-206ENST00000445866 ALDH1L1O75891 902 aa21.99■■□□□ 1.11
SGCE-206ENST00000445866 CCDC191Q8NCU4 936 aa21.99■■□□□ 1.11
SGCE-206ENST00000445866 CWC25Q9NXE8 425 aaPredicted RBP21.98■■□□□ 1.11
SGCE-206ENST00000445866 PSDA5PKW4 1024 aaPredicted RBP21.98■■□□□ 1.11
SGCE-206ENST00000445866 NLRP10Q86W26 655 aa21.98■■□□□ 1.11
SGCE-206ENST00000445866 MYH14Q7Z406 1995 aaKnown RBP21.97■■□□□ 1.11
SGCE-206ENST00000445866 LAMB4A4D0S4 1761 aa21.97■■□□□ 1.11
SGCE-206ENST00000445866 RGPD3A6NKT7 1758 aaPredicted RBP21.97■■□□□ 1.11
SGCE-206ENST00000445866 RGPD4Q7Z3J3 1758 aa21.97■■□□□ 1.11
SGCE-206ENST00000445866 FAM177BA6PVY3 158 aa21.97■■□□□ 1.11
SGCE-206ENST00000445866 NEFLP07196 543 aa21.97■■□□□ 1.11
SGCE-206ENST00000445866 GCKRQ14397 625 aa21.97■■□□□ 1.11
SGCE-206ENST00000445866 MVPQ14764 893 aaKnown RBP21.97■■□□□ 1.11
SGCE-206ENST00000445866 MSL1Q68DK7 614 aa21.97■■□□□ 1.11
SGCE-206ENST00000445866 C9orf78Q9NZ63 289 aaPredicted RBP21.97■■□□□ 1.11
SGCE-206ENST00000445866 NFIXQ14938 502 aa21.96■■□□□ 1.11
SGCE-206ENST00000445866 PARP10Q53GL7 1025 aa21.96■■□□□ 1.11
SGCE-206ENST00000445866 SLC16A10Q8TF71 515 aa21.96■■□□□ 1.11
SGCE-206ENST00000445866 CRBNQ96SW2 442 aa21.96■■□□□ 1.11
SGCE-206ENST00000445866 COL5A3P25940 1745 aaPredicted RBP21.95■■□□□ 1.1
SGCE-206ENST00000445866 TM4SF1P30408 202 aa21.95■■□□□ 1.1
SGCE-206ENST00000445866 SUSD4Q5VX71 490 aa21.95■■□□□ 1.1
SGCE-206ENST00000445866 PPP1R42Q7Z4L9 355 aa21.95■■□□□ 1.1
SGCE-206ENST00000445866 USP44Q9H0E7 712 aa21.95■■□□□ 1.1
SGCE-206ENST00000445866 TRMT112Q9UI30 125 aaKnown RBP21.95■■□□□ 1.1
SGCE-206ENST00000445866 DDX19BQ9UMR2 479 aa21.95■■□□□ 1.1
SGCE-206ENST00000445866 ZBTB7BO15156 539 aaPredicted RBP21.94■■□□□ 1.1
SGCE-206ENST00000445866 JARID2Q92833 1246 aaPredicted RBP21.94■■□□□ 1.1
SGCE-206ENST00000445866 UTP14AQ9BVJ6 771 aaKnown RBP21.94■■□□□ 1.1
SGCE-206ENST00000445866 UBN2Q6ZU65 1347 aa21.94■■□□□ 1.1
SGCE-206ENST00000445866 ATP10DQ9P241 1426 aa21.93■■□□□ 1.1
SGCE-206ENST00000445866 RTL5Q5HYW3 569 aaPredicted RBP21.93■■□□□ 1.1
SGCE-206ENST00000445866 RREB1Q92766 1687 aa21.93■■□□□ 1.1
SGCE-206ENST00000445866 GRM8O00222 908 aa21.92■■□□□ 1.1
Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms