RNA–Protein interactions for RNA: ENST00000445497.1

UBBP3-201, Transcript of ubiquitin B pseudogene 3, humanhuman

BASIC

Gene UBBP3, Length 241 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBBP3-201ENST00000445497 TSHZ3Q63HK5 1081 aa3.36□□□□□ -1.87
UBBP3-201ENST00000445497 ARHGEF25Q86VW2 580 aa3.36□□□□□ -1.87
UBBP3-201ENST00000445497 GLYCTKQ8IVS8 523 aa3.36□□□□□ -1.87
UBBP3-201ENST00000445497 BRSK2Q8IWQ3 736 aa3.36□□□□□ -1.87
UBBP3-201ENST00000445497 SLF2Q8IX21 1173 aa3.36□□□□□ -1.87
UBBP3-201ENST00000445497 RGL4Q8IZJ4 473 aa3.36□□□□□ -1.87
UBBP3-201ENST00000445497 CPXCR1Q8N123 301 aa3.36□□□□□ -1.87
UBBP3-201ENST00000445497 MNS1Q8NEH6 495 aa3.36□□□□□ -1.87
UBBP3-201ENST00000445497 C1orf216Q8TAB5 229 aa3.36□□□□□ -1.87
UBBP3-201ENST00000445497 STK32AQ8WU08 396 aa3.36□□□□□ -1.87
UBBP3-201ENST00000445497 SYAP1Q96A49 352 aaPredicted RBP3.36□□□□□ -1.87
UBBP3-201ENST00000445497 SLC39A13Q96H72 371 aa3.36□□□□□ -1.87
UBBP3-201ENST00000445497 CCDC34Q96HJ3 373 aa3.36□□□□□ -1.87
UBBP3-201ENST00000445497 MPP4Q96JB8 637 aa3.36□□□□□ -1.87
UBBP3-201ENST00000445497 POLR3CQ9BUI4 534 aaPredicted RBP3.36□□□□□ -1.87
UBBP3-201ENST00000445497 ACBD3Q9H3P7 528 aa3.36□□□□□ -1.87
UBBP3-201ENST00000445497 LGR6Q9HBX8 967 aa3.36□□□□□ -1.87
UBBP3-201ENST00000445497 CLIC5Q9NZA1 410 aa3.36□□□□□ -1.87
UBBP3-201ENST00000445497 CPSF2Q9P2I0 782 aaKnown RBP3.36□□□□□ -1.87
UBBP3-201ENST00000445497 MRPS23Q9Y3D9 190 aaKnown RBP3.36□□□□□ -1.87
UBBP3-201ENST00000445497 PPP2R3BQ9Y5P8 575 aa3.36□□□□□ -1.87
UBBP3-201ENST00000445497 DYTNA2CJ06 578 aa3.35□□□□□ -1.87
UBBP3-201ENST00000445497 ALG1L2C9J202 215 aa3.35□□□□□ -1.87
UBBP3-201ENST00000445497 PRRT4C9JH25 899 aa3.35□□□□□ -1.87
UBBP3-201ENST00000445497 FIBPO43427 364 aa3.35□□□□□ -1.87
UBBP3-201ENST00000445497 TSPAN6O43657 245 aa3.35□□□□□ -1.87
UBBP3-201ENST00000445497 HTATSF1O43719 755 aaKnown RBP3.35□□□□□ -1.87
UBBP3-201ENST00000445497 COQ9O75208 318 aa3.35□□□□□ -1.87
UBBP3-201ENST00000445497 PPP1R37O75864 691 aa3.35□□□□□ -1.87
UBBP3-201ENST00000445497 NBPF7P0C2Y1 421 aaPredicted RBP3.35□□□□□ -1.87
UBBP3-201ENST00000445497 TGFB3P10600 412 aa3.35□□□□□ -1.87
UBBP3-201ENST00000445497 ATP2B4P23634 1241 aa3.35□□□□□ -1.87
UBBP3-201ENST00000445497 PPM1FP49593 454 aaPredicted RBP3.35□□□□□ -1.87
UBBP3-201ENST00000445497 ZNF132P52740 706 aa3.35□□□□□ -1.87
UBBP3-201ENST00000445497 TAGLNQ01995 201 aaKnown RBP3.35□□□□□ -1.87
UBBP3-201ENST00000445497 PDE3BQ13370 1112 aa3.35□□□□□ -1.87
UBBP3-201ENST00000445497 NFE2Q16621 373 aaPredicted RBP3.35□□□□□ -1.87
UBBP3-201ENST00000445497 CCDC184Q52MB2 194 aa3.35□□□□□ -1.87
UBBP3-201ENST00000445497 PDXDC1Q6P996 788 aa3.35□□□□□ -1.87
UBBP3-201ENST00000445497 TAS1R3Q7RTX0 852 aa3.35□□□□□ -1.87
UBBP3-201ENST00000445497 ZNF654Q8IZM8 581 aa3.35□□□□□ -1.87
UBBP3-201ENST00000445497 ZNF579Q8NAF0 562 aaKnown RBP3.35□□□□□ -1.87
UBBP3-201ENST00000445497 PNMA1Q8ND90 353 aa3.35□□□□□ -1.87
UBBP3-201ENST00000445497 NGDNQ8NEJ9 315 aaKnown RBP3.35□□□□□ -1.87
UBBP3-201ENST00000445497 APPBP2Q92624 585 aa3.35□□□□□ -1.87
UBBP3-201ENST00000445497 TRIM52Q96A61 297 aa3.35□□□□□ -1.87
UBBP3-201ENST00000445497 UCN2Q96RP3 112 aa3.35□□□□□ -1.87
UBBP3-201ENST00000445497 SELENOOQ9BVL4 669 aa3.35□□□□□ -1.87
UBBP3-201ENST00000445497 REPIN1Q9BWE0 567 aaKnown RBP3.35□□□□□ -1.87
UBBP3-201ENST00000445497 TSPYL2Q9H2G4 693 aaPredicted RBP3.35□□□□□ -1.87
UBBP3-201ENST00000445497 TMEM51Q9NW97 253 aa3.35□□□□□ -1.87
UBBP3-201ENST00000445497 UTP6Q9NYH9 597 aaKnown RBP3.35□□□□□ -1.87
UBBP3-201ENST00000445497 ZRANB1Q9UGI0 708 aa3.35□□□□□ -1.87
UBBP3-201ENST00000445497 HDAC9Q9UKV0 1011 aa3.35□□□□□ -1.87
UBBP3-201ENST00000445497 INTUQ9ULD6 942 aa3.35□□□□□ -1.87
UBBP3-201ENST00000445497 ZMIZ1Q9ULJ6 1067 aa3.35□□□□□ -1.87
UBBP3-201ENST00000445497 MAFFQ9ULX9 164 aa3.35□□□□□ -1.87
UBBP3-201ENST00000445497 DIS3Q9Y2L1 958 aaKnown RBP3.35□□□□□ -1.87
UBBP3-201ENST00000445497 GTPBP10A4D1E9 387 aaKnown RBP3.34□□□□□ -1.87
UBBP3-201ENST00000445497 GOLGA6L3A6NEY3 463 aa3.34□□□□□ -1.87
UBBP3-201ENST00000445497 TRIM64CA6NLI5 447 aa3.34□□□□□ -1.87
UBBP3-201ENST00000445497 C11orf95C9JLR9 678 aaPredicted RBP3.34□□□□□ -1.87
UBBP3-201ENST00000445497 H3BRB1 525 aa3.34□□□□□ -1.87
UBBP3-201ENST00000445497 DPYSL4O14531 572 aa3.34□□□□□ -1.87
UBBP3-201ENST00000445497 TNFRSF10BO14763 440 aa3.34□□□□□ -1.87
UBBP3-201ENST00000445497 CPLX1O14810 134 aa3.34□□□□□ -1.87
UBBP3-201ENST00000445497 IPO8O15397 1037 aaKnown RBP3.34□□□□□ -1.87
UBBP3-201ENST00000445497 SORBS3O60504 671 aa3.34□□□□□ -1.87
UBBP3-201ENST00000445497 PAK3O75914 559 aaPredicted RBP3.34□□□□□ -1.87
UBBP3-201ENST00000445497 IFIT2P09913 472 aaKnown RBP3.34□□□□□ -1.87
UBBP3-201ENST00000445497 SETSIPP0DME0 302 aa3.34□□□□□ -1.87
UBBP3-201ENST00000445497 ATF3P18847 181 aa3.34□□□□□ -1.87
UBBP3-201ENST00000445497 NAP1L1P55209 391 aaKnown RBP3.34□□□□□ -1.87
UBBP3-201ENST00000445497 SH3BGRP55822 239 aaPredicted RBP3.34□□□□□ -1.87
UBBP3-201ENST00000445497 CHMP4BP1P59074 171 aa3.34□□□□□ -1.87
UBBP3-201ENST00000445497 SIM2Q14190 667 aaPredicted RBP3.34□□□□□ -1.87
UBBP3-201ENST00000445497 SMC1AQ14683 1233 aaKnown RBP3.34□□□□□ -1.87
UBBP3-201ENST00000445497 PUM3Q15397 648 aaKnown RBP3.34□□□□□ -1.87
UBBP3-201ENST00000445497 LONRF1Q17RB8 773 aa3.34□□□□□ -1.87
UBBP3-201ENST00000445497 UTP14CQ5TAP6 766 aaKnown RBP3.34□□□□□ -1.87
UBBP3-201ENST00000445497 CPLX2Q6PUV4 134 aaKnown RBP3.34□□□□□ -1.87
UBBP3-201ENST00000445497 LRP10Q7Z4F1 713 aa3.34□□□□□ -1.87
UBBP3-201ENST00000445497 C11orf74Q86VG3 221 aa3.34□□□□□ -1.87
UBBP3-201ENST00000445497 HOMER1Q86YM7 354 aa3.34□□□□□ -1.87
UBBP3-201ENST00000445497 RELL1Q8IUW5 271 aa3.34□□□□□ -1.87
UBBP3-201ENST00000445497 KIAA0825Q8IV33 1275 aa3.34□□□□□ -1.87
UBBP3-201ENST00000445497 IFNL2Q8IZJ0 200 aa3.34□□□□□ -1.87
UBBP3-201ENST00000445497 BHMTQ93088 406 aa3.34□□□□□ -1.87
UBBP3-201ENST00000445497 E2F7Q96AV8 911 aa3.34□□□□□ -1.87
UBBP3-201ENST00000445497 SKA1Q96BD8 255 aa3.34□□□□□ -1.87
UBBP3-201ENST00000445497 RNPC3Q96LT9 517 aaKnown RBP3.34□□□□□ -1.87
UBBP3-201ENST00000445497 GPR101Q96P66 508 aaPredicted RBP3.34□□□□□ -1.87
UBBP3-201ENST00000445497 MAP3K14Q99558 947 aa3.34□□□□□ -1.87
UBBP3-201ENST00000445497 BUD13Q9BRD0 619 aaKnown RBP eCLIP3.34□□□□□ -1.87
UBBP3-201ENST00000445497 PDGFDQ9GZP0 370 aaPredicted RBP3.34□□□□□ -1.87
UBBP3-201ENST00000445497 TUT1Q9H6E5 874 aaKnown RBP3.34□□□□□ -1.87
UBBP3-201ENST00000445497 RIC8AQ9NPQ8 531 aa3.34□□□□□ -1.87
UBBP3-201ENST00000445497 STRN4Q9NRL3 753 aa3.34□□□□□ -1.87
UBBP3-201ENST00000445497 TMEM63CQ9P1W3 806 aa3.34□□□□□ -1.87
UBBP3-201ENST00000445497 SIRPGQ9P1W8 387 aa3.34□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms