RNA–Protein interactions for RNA: ENST00000445237.2

HDAC7-214, Transcript of histone deacetylase 7, humanhuman

TSL 4

Gene HDAC7, Length 364 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC7-214ENST00000445237 PDZRN3Q9UPQ7 1066 aa23.51■■□□□ 1.35
HDAC7-214ENST00000445237 FAM177BA6PVY3 158 aa23.5■■□□□ 1.35
HDAC7-214ENST00000445237 NFKBIEO00221 500 aa23.5■■□□□ 1.35
HDAC7-214ENST00000445237 C21orf2O43822 256 aa23.5■■□□□ 1.35
HDAC7-214ENST00000445237 LMNB1P20700 586 aa23.5■■□□□ 1.35
HDAC7-214ENST00000445237 RIPK4P57078 832 aa23.5■■□□□ 1.35
HDAC7-214ENST00000445237 HLFQ16534 295 aa23.5■■□□□ 1.35
HDAC7-214ENST00000445237 NIP7Q9Y221 180 aaKnown RBP eCLIP23.5■■□□□ 1.35
HDAC7-214ENST00000445237 RRP7AQ9Y3A4 280 aaKnown RBP23.5■■□□□ 1.35
HDAC7-214ENST00000445237 MYBBP1AQ9BQG0 1328 aaKnown RBP23.5■■□□□ 1.35
HDAC7-214ENST00000445237 SBF1O95248 1867 aa23.49■■□□□ 1.35
HDAC7-214ENST00000445237 TOMM70O94826 608 aa23.49■■□□□ 1.35
HDAC7-214ENST00000445237 LAMB4A4D0S4 1761 aa23.48■■□□□ 1.35
HDAC7-214ENST00000445237 SRGNP10124 158 aa23.48■■□□□ 1.35
HDAC7-214ENST00000445237 CCDC146Q8IYE0 955 aa23.48■■□□□ 1.35
HDAC7-214ENST00000445237 KDM2BQ8NHM5 1336 aa23.48■■□□□ 1.35
HDAC7-214ENST00000445237 MYL6BP14649 208 aa23.47■■□□□ 1.35
HDAC7-214ENST00000445237 TMPOP42166 694 aaKnown RBP23.47■■□□□ 1.35
HDAC7-214ENST00000445237 RRAGCQ9HB90 399 aa23.47■■□□□ 1.35
HDAC7-214ENST00000445237 TSPYL4Q9UJ04 414 aa23.47■■□□□ 1.35
HDAC7-214ENST00000445237 STYK1Q6J9G0 422 aa23.46■■□□□ 1.35
HDAC7-214ENST00000445237 TTLL7Q6ZT98 887 aa23.46■■□□□ 1.35
HDAC7-214ENST00000445237 PRPF40BQ6NWY9 871 aaKnown RBP23.45■■□□□ 1.34
HDAC7-214ENST00000445237 TPTE2Q6XPS3 522 aa23.45■■□□□ 1.34
HDAC7-214ENST00000445237 CNKSR1Q969H4 720 aa23.45■■□□□ 1.34
HDAC7-214ENST00000445237 RGL2O15211 777 aa23.44■■□□□ 1.34
HDAC7-214ENST00000445237 NEUROD2Q15784 382 aa23.44■■□□□ 1.34
HDAC7-214ENST00000445237 C16orf71Q8IYS4 520 aaPredicted RBP23.44■■□□□ 1.34
HDAC7-214ENST00000445237 MASTLQ96GX5 879 aa23.44■■□□□ 1.34
HDAC7-214ENST00000445237 MAP3K15Q6ZN16 1313 aa23.42■■□□□ 1.34
HDAC7-214ENST00000445237 ZC3H4Q9UPT8 1303 aaKnown RBP23.42■■□□□ 1.34
HDAC7-214ENST00000445237 KIF6Q6ZMV9 814 aa23.42■■□□□ 1.34
HDAC7-214ENST00000445237 ZBTB3Q9H5J0 574 aa23.42■■□□□ 1.34
HDAC7-214ENST00000445237 SLX4Q8IY92 1834 aa23.41■■□□□ 1.34
HDAC7-214ENST00000445237 ERVV-1B6SEH8 477 aa23.41■■□□□ 1.34
HDAC7-214ENST00000445237 WDR43Q15061 677 aaKnown RBP eCLIP23.41■■□□□ 1.34
HDAC7-214ENST00000445237 NPR1P16066 1061 aa23.4■■□□□ 1.34
HDAC7-214ENST00000445237 EIF2S2P20042 333 aaKnown RBP23.4■■□□□ 1.34
HDAC7-214ENST00000445237 GPTP24298 496 aa23.4■■□□□ 1.34
HDAC7-214ENST00000445237 GTF2E1P29083 439 aaPredicted RBP23.4■■□□□ 1.34
HDAC7-214ENST00000445237 LMOD3Q0VAK6 560 aa23.4■■□□□ 1.34
HDAC7-214ENST00000445237 RBM46Q8TBY0 533 aaKnown RBP23.4■■□□□ 1.34
HDAC7-214ENST00000445237 KLRG2A4D1S0 409 aaPredicted RBP23.39■■□□□ 1.33
HDAC7-214ENST00000445237 GLTPD2A6NH11 291 aa23.39■■□□□ 1.33
HDAC7-214ENST00000445237 NUTM1Q86Y26 1132 aa23.39■■□□□ 1.33
HDAC7-214ENST00000445237 ADAMTS8Q9UP79 889 aa23.39■■□□□ 1.33
HDAC7-214ENST00000445237 ERFEQ4G0M1 354 aa23.38■■□□□ 1.33
HDAC7-214ENST00000445237 RUNDC1Q96C34 613 aa23.38■■□□□ 1.33
HDAC7-214ENST00000445237 TAOK3Q9H2K8 898 aa23.38■■□□□ 1.33
HDAC7-214ENST00000445237 TIAM2Q8IVF5 1701 aa23.38■■□□□ 1.33
HDAC7-214ENST00000445237 ABCC12Q96J65 1359 aa23.38■■□□□ 1.33
HDAC7-214ENST00000445237 CACNA1SQ13698 1873 aa23.37■■□□□ 1.33
HDAC7-214ENST00000445237 ANXA1P04083 346 aa23.37■■□□□ 1.33
HDAC7-214ENST00000445237 PDIA6Q15084 440 aa23.37■■□□□ 1.33
HDAC7-214ENST00000445237 PROSER3Q2NL68 480 aa23.37■■□□□ 1.33
HDAC7-214ENST00000445237 C7orf43Q8WVR3 580 aa23.37■■□□□ 1.33
HDAC7-214ENST00000445237 NECTIN2Q92692 538 aa23.37■■□□□ 1.33
HDAC7-214ENST00000445237 PRKRIP1Q9H875 184 aaPredicted RBP23.37■■□□□ 1.33
HDAC7-214ENST00000445237 FER1L6Q2WGJ9 1857 aa23.36■■□□□ 1.33
HDAC7-214ENST00000445237 CCDC88AQ3V6T2 1871 aa23.36■■□□□ 1.33
HDAC7-214ENST00000445237 ERBB4Q15303 1308 aa23.36■■□□□ 1.33
HDAC7-214ENST00000445237 LTBP3Q9NS15 1303 aa23.36■■□□□ 1.33
HDAC7-214ENST00000445237 TNRC6CQ9HCJ0 1690 aaKnown RBP23.36■■□□□ 1.33
HDAC7-214ENST00000445237 APLP1P51693 650 aa23.36■■□□□ 1.33
HDAC7-214ENST00000445237 OLFM4Q6UX06 510 aa23.36■■□□□ 1.33
HDAC7-214ENST00000445237 LRP10Q7Z4F1 713 aa23.36■■□□□ 1.33
HDAC7-214ENST00000445237 BABAM1Q9NWV8 329 aa23.36■■□□□ 1.33
HDAC7-214ENST00000445237 TRIM35Q9UPQ4 493 aa23.36■■□□□ 1.33
HDAC7-214ENST00000445237 LAS1LQ9Y4W2 734 aaKnown RBP23.36■■□□□ 1.33
HDAC7-214ENST00000445237 UBN2Q6ZU65 1347 aa23.35■■□□□ 1.33
HDAC7-214ENST00000445237 KRT24Q2M2I5 525 aa23.35■■□□□ 1.33
HDAC7-214ENST00000445237 SOGA3Q5TF21 947 aa23.35■■□□□ 1.33
HDAC7-214ENST00000445237 NYXQ9GZU5 481 aa23.35■■□□□ 1.33
HDAC7-214ENST00000445237 VEGFAP15692 232 aaPredicted RBP23.34■■□□□ 1.33
HDAC7-214ENST00000445237 SUSD4Q5VX71 490 aa23.34■■□□□ 1.33
HDAC7-214ENST00000445237 ARFGEF2Q9Y6D5 1785 aa23.34■■□□□ 1.33
HDAC7-214ENST00000445237 CHL1O00533 1208 aa23.33■■□□□ 1.33
HDAC7-214ENST00000445237 FSTL1Q12841 308 aa23.33■■□□□ 1.33
HDAC7-214ENST00000445237 CCDC93Q567U6 631 aa23.33■■□□□ 1.33
HDAC7-214ENST00000445237 GIGYF2Q6Y7W6 1299 aaKnown RBP23.33■■□□□ 1.33
HDAC7-214ENST00000445237 ZNF34Q8IZ26 560 aa23.33■■□□□ 1.33
HDAC7-214ENST00000445237 NUP98P52948 1817 aa23.33■■□□□ 1.32
HDAC7-214ENST00000445237 DPY19L2Q6NUT2 758 aa23.32■■□□□ 1.32
HDAC7-214ENST00000445237 HTRA3P83110 453 aa23.31■■□□□ 1.32
HDAC7-214ENST00000445237 POTECB2RU33 542 aa23.3■■□□□ 1.32
HDAC7-214ENST00000445237 ALDH1B1P30837 517 aa23.3■■□□□ 1.32
HDAC7-214ENST00000445237 AIMP1Q12904 312 aaKnown RBP23.3■■□□□ 1.32
HDAC7-214ENST00000445237 CRY2Q49AN0 593 aa23.3■■□□□ 1.32
HDAC7-214ENST00000445237 ZNF277Q9NRM2 450 aaPredicted RBP23.3■■□□□ 1.32
HDAC7-214ENST00000445237 NTSR2O95665 410 aa23.29■■□□□ 1.32
HDAC7-214ENST00000445237 FKBP4Q02790 459 aaKnown RBP eCLIP23.29■■□□□ 1.32
HDAC7-214ENST00000445237 COPS6Q7L5N1 327 aa23.29■■□□□ 1.32
HDAC7-214ENST00000445237 SMC1BQ8NDV3 1235 aa23.29■■□□□ 1.32
HDAC7-214ENST00000445237 XAGE3Q8WTP9 111 aa23.29■■□□□ 1.32
HDAC7-214ENST00000445237 IBTKQ9P2D0 1353 aaPredicted RBP23.28■■□□□ 1.32
HDAC7-214ENST00000445237 DDNO94850 711 aaPredicted RBP23.28■■□□□ 1.32
HDAC7-214ENST00000445237 DNAJC5GQ8N7S2 189 aa23.28■■□□□ 1.32
HDAC7-214ENST00000445237 C3orf67Q6ZVT6 689 aa23.27■■□□□ 1.32
HDAC7-214ENST00000445237 RPGRQ92834 1020 aaKnown RBP23.27■■□□□ 1.32
HDAC7-214ENST00000445237 DICER1Q9UPY3 1922 aaKnown RBP23.27■■□□□ 1.32
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms